RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 SMIM21Q3B7S5 101 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 GPR107Q5VW38 600 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 ZNF788Q6ZQV5 615 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 NR2C2APQ86WQ0 139 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 FAM58AQ8N1B3 248 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 OR51T1Q8NGJ9 327 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 OR6M1Q8NGM8 313 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 MRPS24Q96EL2 167 aaKnown RBP10.59□□□□□ -0.71
SYNE2-219ENST00000555323 NKX3-1Q99801 234 aaPredicted RBP10.59□□□□□ -0.71
SYNE2-219ENST00000555323 GAL3ST1Q99999 423 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 METTL9Q9H1A3 318 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 PCDHB16Q9NRJ7 776 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 RBFOX1Q9NWB1 397 aaKnown RBP10.59□□□□□ -0.71
SYNE2-219ENST00000555323 DNAJB11Q9UBS4 358 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 ZNF222Q9UK12 451 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 ING4Q9UNL4 249 aa10.59□□□□□ -0.71
SYNE2-219ENST00000555323 IGKV1D-17A0A075B6S4 117 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 IGHV3OR15-7A0A075B7D8 119 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 ISPDA4D126 451 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 RFPL4AA6NLU0 287 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 IFITM5A6NNB3 132 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 CEACAM18A8MTB9 384 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 NOTOA8MTQ0 251 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 RFPL4AL1F8VTS6 287 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 TMEM127O75204 238 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 IGHV2-5P01817 119 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 GYPAP02724 150 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 UBBP0CG47 229 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 LMO1P25800 156 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 TMBIM6P55061 237 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 OR10A3P58181 314 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 RSU1Q15404 277 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 DGUOKQ16854 277 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 NHLRC3Q5JS37 347 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 SPIN3Q5JUX0 258 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 GLIPR1L1Q6UWM5 242 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 LYPD2Q6UXB3 125 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 ZNF841Q6ZN19 808 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 CIARTQ8N365 385 aaPredicted RBP10.58□□□□□ -0.72
SYNE2-219ENST00000555323 OR5T2Q8NGG2 359 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 SDSLQ96GA7 329 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 POM121Q96HA1 1249 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 COX4I2Q96KJ9 171 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 S100A13Q99584 98 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 BCL7BQ9BQE9 202 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 TMUB1Q9BVT8 246 aa10.58□□□□□ -0.72
SYNE2-219ENST00000555323 NAA50Q9GZZ1 169 aaKnown RBP10.58□□□□□ -0.72
SYNE2-219ENST00000555323 MRPS28Q9Y2Q9 187 aaKnown RBP10.58□□□□□ -0.72
SYNE2-219ENST00000555323 MYO9AB2RTY4 2548 aa10.57□□□□□ -0.72
SYNE2-219ENST00000555323 AIPO00170 330 aa10.57□□□□□ -0.72
SYNE2-219ENST00000555323 IL1AP01583 271 aa10.57□□□□□ -0.72
SYNE2-219ENST00000555323 CSTBP04080 98 aaKnown RBP10.57□□□□□ -0.72
SYNE2-219ENST00000555323 HEXAP06865 529 aa10.57□□□□□ -0.72
SYNE2-219ENST00000555323 FOSL1P15407 271 aa10.57□□□□□ -0.72
SYNE2-219ENST00000555323 PRDX2P32119 198 aa10.57□□□□□ -0.72
SYNE2-219ENST00000555323 GMFBP60983 142 aa10.57□□□□□ -0.72
SYNE2-219ENST00000555323 NCS1P62166 190 aa10.57□□□□□ -0.72
SYNE2-219ENST00000555323 QRFPP83859 136 aa10.57□□□□□ -0.72
SYNE2-219ENST00000555323 C11orf91Q3C1V1 193 aa10.57□□□□□ -0.72
SYNE2-219ENST00000555323 AWAT2Q6E213 333 aa10.57□□□□□ -0.72
SYNE2-219ENST00000555323 SLC36A1Q7Z2H8 476 aa10.57□□□□□ -0.72
SYNE2-219ENST00000555323 CD177Q8N6Q3 437 aa10.57□□□□□ -0.72
SYNE2-219ENST00000555323 EMG1Q92979 244 aaKnown RBP10.57□□□□□ -0.72
SYNE2-219ENST00000555323 RAB39BQ96DA2 213 aa10.57□□□□□ -0.72
SYNE2-219ENST00000555323 NEIL1Q96FI4 390 aaPredicted RBP10.57□□□□□ -0.72
SYNE2-219ENST00000555323 MED30Q96HR3 178 aa10.57□□□□□ -0.72
SYNE2-219ENST00000555323 FAM192AQ9GZU8 254 aa10.57□□□□□ -0.72
SYNE2-219ENST00000555323 ZNF665Q9H7R5 613 aa10.57□□□□□ -0.72
SYNE2-219ENST00000555323 FBLN5Q9UBX5 448 aa10.57□□□□□ -0.72
SYNE2-219ENST00000555323 STEAP1Q9UHE8 339 aa10.57□□□□□ -0.72
SYNE2-219ENST00000555323 PCDHB10Q9UN67 800 aa10.57□□□□□ -0.72
SYNE2-219ENST00000555323 MAB21L2Q9Y586 359 aa10.57□□□□□ -0.72
SYNE2-219ENST00000555323 ZNF469Q96JG9 3925 aaPredicted RBP10.56□□□□□ -0.72
SYNE2-219ENST00000555323 TMEM14DPA8MWL7 114 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 H7C1Q1 480 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 LDLRAD4O15165 306 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 SIGLEC5O15389 551 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 TMPRSS2O15393 492 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 ADAM20O43506 726 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 HTR3BO95264 441 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 BPNT1O95861 308 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 CHRM2P08172 466 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 GTF2F2P13984 249 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 PRKACAP17612 351 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 IL2RGP31785 369 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 TGFBR1P36897 503 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 RPS19P39019 145 aaKnown RBP10.56□□□□□ -0.72
SYNE2-219ENST00000555323 NPY4RP50391 375 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 CAPZA1P52907 286 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 VBP1P61758 197 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 LSM3P62310 102 aaKnown RBP10.56□□□□□ -0.72
SYNE2-219ENST00000555323 BLMHQ13867 455 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 IL13RA2Q14627 380 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 C2orf76Q3KRA6 126 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 SLC22A6Q4U2R8 563 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 Q6P435 159 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 FIP1L1Q6UN15 594 aaKnown RBP10.56□□□□□ -0.72
SYNE2-219ENST00000555323 NLRC3Q7RTR2 1065 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 CROCCP3Q8IVE0 287 aa10.56□□□□□ -0.72
SYNE2-219ENST00000555323 BATF2Q8N1L9 274 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms