RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 SOX2P48431 317 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 POU3F4P49335 361 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 RBP2P50120 134 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 CAV3P56539 151 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ERVFRD-1P60508 538 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 BAMBIQ13145 260 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 CNN3Q15417 329 aaKnown RBP10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 GPR157Q5UAW9 335 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 CRIP3Q6Q6R5 217 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 RBMS3Q6XE24 437 aaKnown RBP10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 TMPRSS11AQ6ZMR5 421 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 C9orf139Q6ZV77 190 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 VMO1Q7Z5L0 202 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 DNAAF1Q8NEP3 725 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 OR4M1Q8NGD0 313 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 C8orf46Q8TAG6 207 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 FBLIM1Q8WUP2 373 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 TAF15Q92804 592 aaKnown RBP eCLIP10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 CEP19Q96LK0 163 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 ZCCHC4Q9H5U6 513 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 SIRT7Q9NRC8 400 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 IL36RNQ9UBH0 155 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 PSORS1C1Q9UIG5 152 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 EXOSC1Q9Y3B2 195 aaKnown RBP10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 HSPE1-MOB4S4R3N1 261 aa10.21□□□□□ -0.77
TRAPPC6B-205ENST00000555269 STAB1Q9NY15 2570 aa10.21□□□□□ -0.78
TRAPPC6B-205ENST00000555269 IGHV1-69DA0A0B4J2H0 117 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 IGKV1-12A0A0C4DH73 117 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 A0A1W2PQ09 198 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 TRIM77I1YAP6 450 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 OGG1O15527 345 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 ANGPTL7O43827 346 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 IGKV1D-12P01611 117 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 IGHV1-69P01742 117 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 CCDC159P0C7I6 412 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 OCM2P0CE71 109 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 OCMP0CE72 109 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 MYL12AP19105 171 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 BCL3P20749 454 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 C21orf33P30042 268 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 AQP4P55087 323 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 SNU13P55769 128 aaKnown RBP10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 UBA52P62987 128 aaKnown RBP10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 COL10A1Q03692 680 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 MRPL28Q13084 256 aaKnown RBP10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 PDZK1IP1Q13113 114 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 DOC2BQ14184 412 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 PDCD1Q15116 288 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 TMEM200BQ69YZ2 307 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 RPL22L1Q6P5R6 122 aaKnown RBP10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 SERPINA12Q8IW75 414 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 MKXQ8IYA7 352 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 ZNF561Q8N587 486 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 ZFP41Q8N8Y5 198 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 ZNF485Q8NCK3 441 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 OR5D18Q8NGL1 313 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 OR5D14Q8NGL3 314 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 FAM216AQ8WUB2 273 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 TSEN15Q8WW01 171 aaKnown RBP10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 ORAI1Q96D31 301 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 OPALINQ96PE5 141 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 JMJD8Q96S16 334 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 COMMD4Q9H0A8 199 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 TNFRSF19Q9NS68 423 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 C19orf12Q9NSK7 152 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 RBFOX1Q9NWB1 397 aaKnown RBP10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 DHDHQ9UQ10 334 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 KPTNQ9Y664 436 aa10.2□□□□□ -0.78
TRAPPC6B-205ENST00000555269 IRGMA1A4Y4 181 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 MEX3AA1L020 520 aaKnown RBP10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 EFCAB10A6NFE3 127 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 DNAJC9-AS1A6NH13 148 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 SLC1A7O00341 560 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 KNG1P01042 644 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 MT-ND2P03891 347 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 TK1P04183 234 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 RPSAP08865 295 aaKnown RBP10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 KLRD1Q13241 179 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 CDK5R1Q15078 307 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 SLC9A3R2Q15599 337 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 CCDC58Q4VC31 144 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 ASPHD2Q6ICH7 369 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 LHFPL2Q6ZUX7 228 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 AHSA2Q719I0 299 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 FAM185AQ8N0U4 392 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 FAM58AQ8N1B3 248 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 PNKDQ8N490 385 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 PARP16Q8N5Y8 322 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 OR13C5Q8NGS8 318 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 ZFAND2BQ8WV99 257 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 TNFRSF14Q92956 283 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 EMG1Q92979 244 aaKnown RBP10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 NKX3-1Q99801 234 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 OCSTAMPQ9BR26 566 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 VCXQ9H320 206 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 PLCXD1Q9NUJ7 323 aa10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 CHCHD3Q9NX63 227 aaKnown RBP10.19□□□□□ -0.78
TRAPPC6B-205ENST00000555269 A0A0U1RQK1 487 aa10.18□□□□□ -0.78
TRAPPC6B-205ENST00000555269 TMEM82A0PJX8 343 aa10.18□□□□□ -0.78
TRAPPC6B-205ENST00000555269 PTGES3LE9PB15 166 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms