RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 M0R1X1 148 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 DFFAO00273 331 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 CXCR1P25024 350 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 IVDP26440 423 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 PSMB5P28074 263 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 PAFAH1B2P68402 229 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 C2orf54Q08AI8 447 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 ZNF616Q08AN1 781 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 SHHQ15465 462 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 FAM222AQ5U5X8 452 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 IGFL1Q6UW32 110 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 DRAM1Q8N682 238 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 RXFP2Q8WXD0 754 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 BAALCQ8WXS3 180 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 TMEM175Q9BSA9 504 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 NUDT9Q9BW91 350 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 SIGLEC7Q9Y286 467 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 LRRC42Q9Y546 428 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 ZNF609O15014 1411 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 COL6A3P12111 3177 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 COL24A1Q17RW2 1714 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 NUP98P52948 1817 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 SPTBN5Q9NRC6 3674 aaKnown RBP3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 BAHCC1Q9P281 2608 aa3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 LAMB4A4D0S4 1761 aa3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 CENPBD1B2RD01 187 aa3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 RPL36A-HNRNPH2H7BZ11 118 aa3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 SLC35G6P0C7Q6 338 aa3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 STAG3L2P0CL84 134 aa3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 INCA1Q0VD86 236 aa3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 ST3GAL4Q11206 333 aa3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 C6orf99Q4VX62 202 aa3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 TMEM236Q5W0B7 351 aa3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 THOC7Q6I9Y2 204 aaKnown RBP3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 ARHGAP18Q8N392 663 aa3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 SPANXA2-OT1Q8N9U9 137 aa3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 MITD1Q8WV92 249 aa3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 TMEM234Q8WY98 164 aa3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 FAM131CQ96AQ9 280 aa3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 C18orf15Q96N68 181 aa3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 ZNF2Q9BSG1 426 aaPredicted RBP3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 GAL3ST2Q9H3Q3 398 aa3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 HEBP1Q9NRV9 189 aa3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 NRXN2Q9P2S2 1712 aa3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 NDRG2Q9UN36 371 aaKnown RBP3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 FLVCR2Q9UPI3 526 aa3.06□□□□□ -1.92
CKS1BP1-201ENST00000555221 KIF13BQ9NQT8 1826 aa3.05□□□□□ -1.92
CKS1BP1-201ENST00000555221 SCO1O75880 301 aa3.05□□□□□ -1.92
CKS1BP1-201ENST00000555221 SLC35A1P78382 337 aa3.05□□□□□ -1.92
CKS1BP1-201ENST00000555221 SLC35B1P78383 322 aa3.05□□□□□ -1.92
CKS1BP1-201ENST00000555221 DMC1Q14565 340 aa3.05□□□□□ -1.92
CKS1BP1-201ENST00000555221 CPTPQ5TA50 214 aa3.05□□□□□ -1.92
CKS1BP1-201ENST00000555221 SLC25A34Q6PIV7 304 aa3.05□□□□□ -1.92
CKS1BP1-201ENST00000555221 LRRC52Q8N7C0 313 aa3.05□□□□□ -1.92
CKS1BP1-201ENST00000555221 OR4M2Q8NGB6 313 aa3.05□□□□□ -1.92
CKS1BP1-201ENST00000555221 SFXN5Q8TD22 340 aa3.05□□□□□ -1.92
CKS1BP1-201ENST00000555221 TFGQ92734 400 aaPredicted RBP3.05□□□□□ -1.92
CKS1BP1-201ENST00000555221 SMARCD1Q96GM5 515 aa3.05□□□□□ -1.92
CKS1BP1-201ENST00000555221 SNF8Q96H20 258 aa3.05□□□□□ -1.92
CKS1BP1-201ENST00000555221 ARV1Q9H2C2 271 aa3.05□□□□□ -1.92
CKS1BP1-201ENST00000555221 OR51B5Q9H339 312 aa3.05□□□□□ -1.92
CKS1BP1-201ENST00000555221 ZSCAN16Q9H4T2 348 aaPredicted RBP3.05□□□□□ -1.92
CKS1BP1-201ENST00000555221 FARSAQ9Y285 508 aaKnown RBP3.05□□□□□ -1.92
CKS1BP1-201ENST00000555221 SCN7AQ01118 1682 aa3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 COL1A1P02452 1464 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 H7C2Y5 167 aa3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 RNF113AO15541 343 aaKnown RBP3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 KDELR3O43731 214 aa3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 PLEKHA8P1O95397 391 aa3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 RPN2P04844 631 aa3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 TAS2R60P59551 318 aa3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 TRDNQ13061 729 aa3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 ATP6V1FQ16864 119 aa3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 HNRNPA1L2Q32P51 320 aaKnown RBP3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 DNLZQ5SXM8 178 aa3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 APOBEC3HQ6NTF7 200 aaKnown RBP3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 SLC7A5P1Q8MH63 180 aa3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 TMEM105Q8N8V8 129 aa3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 ING5Q8WYH8 240 aa3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 TMEM159Q96B96 161 aa3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 RMI2Q96E14 147 aa3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 MRPL48Q96GC5 212 aaKnown RBP3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 ZBED3Q96IU2 234 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 ALS2CR12Q96Q35 445 aa3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 BOLA2Q9H3K6 86 aa3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 C6orf50Q9HD87 102 aa3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 KLF12Q9Y4X4 402 aa3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 VIRMAQ69YN4 1812 aaKnown RBP3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 SLX4Q8IY92 1834 aa3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 ARFGEF1Q9Y6D6 1849 aa3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 ANKRD36CQ5JPF3 1778 aa3.04□□□□□ -1.92
CKS1BP1-201ENST00000555221 SCN4AP35499 1836 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 AFDNP55196 1824 aaKnown RBP3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 TUBGCP6Q96RT7 1819 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 BCORQ6W2J9 1755 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 TRAV8-4A0A0B4J246 113 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 IGHV2OR16-5A0A0B4J2B6 119 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 IGKV6-21A0A0C4DH24 114 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 SPRR5A0A1B0GTR4 108 aa3.03□□□□□ -1.92
CKS1BP1-201ENST00000555221 BTNL10A8MVZ5 291 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms