RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 METTL9Q9H1A3 318 aa10.24□□□□□ -0.77
SHMT2-209ENST00000553949 HMG20AQ9NP66 347 aa10.24□□□□□ -0.77
SHMT2-209ENST00000553949 IL36GQ9NZH8 169 aa10.24□□□□□ -0.77
SHMT2-209ENST00000553949 TANC2Q9HCD6 1990 aa10.24□□□□□ -0.77
SHMT2-209ENST00000553949 PRRC2AP48634 2157 aaKnown RBP10.24□□□□□ -0.77
SHMT2-209ENST00000553949 CHD3Q12873 2000 aaKnown RBP10.23□□□□□ -0.77
SHMT2-209ENST00000553949 A0A096LNT2 108 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 IFITM5A6NNB3 132 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 OR2AT4A6NND4 320 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 CEACAM18A8MTB9 384 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 NOTOA8MTQ0 251 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 AIPO00170 330 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 TNFRSF13BO14836 293 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-209ENST00000553949 ZNF780AO75290 641 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-209ENST00000553949 HTR3BO95264 441 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 KNG1P01042 644 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 UBBP0CG47 229 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 PSG2P11465 335 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 PRKACAP17612 351 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 SERPINA2P20848 420 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 CFPP27918 469 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 SERPINB10P48595 397 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 BMXP51813 675 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 TMBIM6P55061 237 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 CAV3P56539 151 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 FGF12P61328 243 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 P2RY14Q15391 338 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 DGUOKQ16854 277 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 SLC22A6Q4U2R8 563 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 HES5Q5TA89 166 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 STUMQ69YW2 141 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 FIP1L1Q6UN15 594 aaKnown RBP10.23□□□□□ -0.77
SHMT2-209ENST00000553949 DCDC5Q6ZRR9 648 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 Q8NFD4 153 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 CLDND2Q8NHS1 167 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 ANGPTL6Q8NI99 470 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 RAB2BQ8WUD1 216 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 PCDHB16Q9NRJ7 776 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 IL36RNQ9UBH0 155 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 GHRLQ9UBU3 117 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 CEPT1Q9Y6K0 416 aa10.23□□□□□ -0.77
SHMT2-209ENST00000553949 IGKV1D-17A0A075B6S4 117 aa10.22□□□□□ -0.77
SHMT2-209ENST00000553949 A0A1W2PP11 408 aa10.22□□□□□ -0.77
SHMT2-209ENST00000553949 RFPL4AA6NLU0 287 aa10.22□□□□□ -0.77
SHMT2-209ENST00000553949 RFPL4AL1F8VTS6 287 aa10.22□□□□□ -0.77
SHMT2-209ENST00000553949 NDUFA2O43678 99 aa10.22□□□□□ -0.77
SHMT2-209ENST00000553949 BPNT1O95861 308 aa10.22□□□□□ -0.77
SHMT2-209ENST00000553949 IL1AP01583 271 aa10.22□□□□□ -0.77
SHMT2-209ENST00000553949 CSTBP04080 98 aaKnown RBP10.22□□□□□ -0.77
SHMT2-209ENST00000553949 ARSBP15848 533 aa10.22□□□□□ -0.77
SHMT2-209ENST00000553949 AMY2BP19961 511 aa10.22□□□□□ -0.77
SHMT2-209ENST00000553949 RPS19P39019 145 aaKnown RBP10.22□□□□□ -0.77
SHMT2-209ENST00000553949 SNU13P55769 128 aaKnown RBP10.22□□□□□ -0.77
SHMT2-209ENST00000553949 CLDN12P56749 244 aa10.22□□□□□ -0.77
SHMT2-209ENST00000553949 LOXL1Q08397 574 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-209ENST00000553949 GPR176Q14439 515 aa10.22□□□□□ -0.77
SHMT2-209ENST00000553949 ATPAF1Q5TC12 328 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-209ENST00000553949 SFXN4Q6P4A7 337 aa10.22□□□□□ -0.77
SHMT2-209ENST00000553949 LYPD2Q6UXB3 125 aa10.22□□□□□ -0.77
SHMT2-209ENST00000553949 CCL13Q99616 98 aa10.22□□□□□ -0.77
SHMT2-209ENST00000553949 BCL7BQ9BQE9 202 aa10.22□□□□□ -0.77
SHMT2-209ENST00000553949 OR14J1Q9UGF5 321 aa10.22□□□□□ -0.77
SHMT2-209ENST00000553949 STEAP1Q9UHE8 339 aa10.22□□□□□ -0.77
SHMT2-209ENST00000553949 ZNF222Q9UK12 451 aa10.22□□□□□ -0.77
SHMT2-209ENST00000553949 PCDHB10Q9UN67 800 aa10.22□□□□□ -0.77
SHMT2-209ENST00000553949 MAST4O15021 2626 aa10.22□□□□□ -0.77
SHMT2-209ENST00000553949 NKX6-3A6NJ46 265 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 H7C1Q1 480 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 TMPRSS2O15393 492 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 ADAM20O43506 726 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 NOL3O60936 208 aaKnown RBP10.21□□□□□ -0.77
SHMT2-209ENST00000553949 IGHV2-5P01817 119 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 TFF1P04155 84 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 VSIG8P0DPA2 414 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 SLC2A2P11168 524 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-209ENST00000553949 GTF2F2P13984 249 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 RPS2P15880 293 aaKnown RBP10.21□□□□□ -0.77
SHMT2-209ENST00000553949 DUSP1P28562 367 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 IL2RGP31785 369 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 PRDX2P32119 198 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 RANBP1P43487 201 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 GABRA2P47869 451 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 CEBPDP49716 269 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-209ENST00000553949 LMO4P61968 165 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 ZNF146Q15072 292 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 SPIN3Q5JUX0 258 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 SPNS3Q6ZMD2 512 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 ZNF788Q6ZQV5 615 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 USP43Q70EL4 1123 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 OSR2Q8N2R0 312 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 CIARTQ8N365 385 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-209ENST00000553949 CD177Q8N6Q3 437 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 MAPK1IP1LQ8NDC0 245 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 TMEM104Q8NE00 496 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 OR51T1Q8NGJ9 327 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 NDNFQ8TB73 568 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 FAM3DQ96BQ1 224 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 ISOC1Q96CN7 298 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 SDSLQ96GA7 329 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 GAFA1Q96PS6 74 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms