RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 TUFMP49411 452 aaKnown RBP1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 DYNC1I2Q13409 638 aaKnown RBP1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 TOMM34Q15785 309 aaPredicted RBP1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 FAM104BQ5XKR9 115 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 TMEM136Q6ZRR5 245 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 PID1Q7Z2X4 250 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 SETD3Q86TU7 594 aaPredicted RBP1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 NELFCDQ8IXH7 590 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 ZDHHC22Q8N966 263 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 OR4K2Q8NGD2 314 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 OR5H2Q8NGV7 314 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 OR6K2Q8NGY2 324 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 FAM57AQ8TBR7 257 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 C22orf15Q8WYQ4 148 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 RBPMSQ93062 196 aaKnown RBP1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 YIPF5Q969M3 257 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 GLT1D1Q96MS3 346 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 ZNF649Q9BS31 505 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 SHANK2-AS3Q9BTD1 123 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 KRTAP4-3Q9BYR4 195 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 PORCNQ9H237 461 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 SDHAF3Q9NRP4 125 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 DDIT4Q9NX09 232 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 SDHAF2Q9NX18 166 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 VAPAQ9P0L0 249 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 INSIG2Q9Y5U4 225 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 ZNF780BQ9Y6R6 833 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 SZT2Q5T011 3432 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 RTEL1-TNFRSF6BF6WH68 1400 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 ELP1O95163 1332 aa1.9□□□□□ -2.11
EFCAB11-204ENST00000553871 OBSCNQ5VST9 7968 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 IGKV3D-11A0A0A0MRZ8 115 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 IZUMO1RA6ND01 250 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 NDUFS8O00217 210 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 CCNOP22674 350 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 SLC6A1P30531 599 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 FAM53BQ14153 422 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 IGFBP7Q16270 282 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 ATP6AP1LQ52LC2 224 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 RESP18Q5W5W9 173 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 KCTD16Q68DU8 428 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 ZFAND6Q6FIF0 208 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 APOBEC3HQ6NTF7 200 aaKnown RBP1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 DEFB132Q7Z7B7 95 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 CYP4Z1Q86W10 505 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 ATPAF2Q8N5M1 289 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 TRIML2Q8N7C3 387 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 CDKL2Q92772 493 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 ADTRPQ96IZ2 230 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 PPP1R36Q96LQ0 422 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 RILPQ96NA2 401 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 QKIQ96PU8 341 aaKnown RBP eCLIP1.89□□□□□ -2.115e-7■■■■■ 27.1
EFCAB11-204ENST00000553871 PEBP4Q96S96 227 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 COPS4Q9BT78 406 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 ANGPTL4Q9BY76 406 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 CHRNA10Q9GZZ6 450 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 LHX5Q9H2C1 402 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 NLE1Q9NVX2 485 aaPredicted RBP1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 DNAJC27Q9NZQ0 273 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 ANXA10Q9UJ72 324 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 WRNQ14191 1432 aaPredicted RBP eCLIP1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 NCOA1Q15788 1441 aa1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 RIMS1Q86UR5 1692 aaKnown RBP1.89□□□□□ -2.11
EFCAB11-204ENST00000553871 GOLGA3Q08378 1498 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 PLB1Q6P1J6 1458 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 ZFHX4Q86UP3 3567 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 TNIKQ9UKE5 1360 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 CUX1P39880 1505 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 TOPBP1Q92547 1522 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 PREX1Q8TCU6 1659 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 SLC5A10A0PJK1 596 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 RAB19A4D1S5 217 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 K7EN84 100 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 CBR3O75828 277 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 KCNK2O95069 426 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 RLN2P04090 185 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 S100A9P06702 114 aaKnown RBP1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 OR5AC1P0C628 307 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 BGNP21810 368 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 ACOT2P49753 483 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 DSTNP60981 165 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 MEF2CQ06413 473 aaPredicted RBP1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 STX4Q12846 297 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 ELOCQ15369 112 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 VAMP3Q15836 100 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 TTMPQ5BVD1 217 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 UBE2NLQ5JXB2 153 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 TMEM69Q5SWH9 247 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 MRPL2Q5T653 305 aaKnown RBP1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 ZNF773Q6PK81 442 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 FA2HQ7L5A8 372 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 CYP4Z2PQ8N1L4 340 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 OR4D6Q8NGJ1 314 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 OR51Q1Q8NH59 317 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 LRRC20Q8TCA0 184 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 CACNG8Q8WXS5 425 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 SPACA5Q96QH8 159 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 VAT1Q99536 393 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 SHCBP1LQ9BZQ2 653 aa1.88□□□□□ -2.11
EFCAB11-204ENST00000553871 SRRQ9GZT4 340 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms