RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 Q8IYB0 196 aa10.36□□□□□ -0.75
LINC00643-202ENST00000553426 ENTHD1Q8IYW4 607 aa10.36□□□□□ -0.75
LINC00643-202ENST00000553426 FOXRED1Q96CU9 486 aaPredicted RBP10.36□□□□□ -0.75
LINC00643-202ENST00000553426 CENPNQ96H22 339 aaPredicted RBP10.36□□□□□ -0.75
LINC00643-202ENST00000553426 CHST5Q9GZS9 411 aa10.36□□□□□ -0.75
LINC00643-202ENST00000553426 GLS2Q9UI32 602 aa10.36□□□□□ -0.75
LINC00643-202ENST00000553426 TBL2Q9Y4P3 447 aaKnown RBP10.36□□□□□ -0.75
LINC00643-202ENST00000553426 ORC6Q9Y5N6 252 aa10.36□□□□□ -0.75
LINC00643-202ENST00000553426 hADV38S2A0JD32 116 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 C17orf98A8MV24 154 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 INMTO95050 263 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 TSPAN15O95858 294 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 RBP4P02753 201 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 ARG1P05089 322 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 RBP2P50120 134 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 ATP1B3P54709 279 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 UBE2V2Q15819 145 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 SLC25A26Q70HW3 274 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 C11orf42Q8N5U0 333 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 PPP1R35Q8TAP8 253 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 PP6455Q8WZ26 134 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 EMG1Q92979 244 aaKnown RBP10.35□□□□□ -0.75
LINC00643-202ENST00000553426 SLAMF9Q96A28 289 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 MALSU1Q96EH3 234 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 SNX22Q96L94 193 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 ZNF714Q96N38 554 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 NKX3-1Q99801 234 aaPredicted RBP10.35□□□□□ -0.75
LINC00643-202ENST00000553426 CDCA4Q9BXL8 241 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 GABARAPL3Q9BY60 117 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 IMPAD1Q9NX62 359 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 MTCH1Q9NZJ7 389 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 GNG8Q9UK08 70 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 PITPNC1Q9UKF7 332 aa10.35□□□□□ -0.75
LINC00643-202ENST00000553426 LOC107986453A0A1B0GWG9 222 aa10.34□□□□□ -0.75
LINC00643-202ENST00000553426 SNTNA6NMZ2 147 aa10.34□□□□□ -0.75
LINC00643-202ENST00000553426 VGLL3A8MV65 326 aa10.34□□□□□ -0.75
LINC00643-202ENST00000553426 PEX14O75381 377 aa10.34□□□□□ -0.75
LINC00643-202ENST00000553426 APOL3O95236 402 aa10.34□□□□□ -0.75
LINC00643-202ENST00000553426 GABRR1P24046 479 aa10.34□□□□□ -0.75
LINC00643-202ENST00000553426 PEX2P28328 305 aa10.34□□□□□ -0.75
LINC00643-202ENST00000553426 EFNB2P52799 333 aa10.34□□□□□ -0.75
LINC00643-202ENST00000553426 OR12D2P58182 307 aa10.34□□□□□ -0.75
LINC00643-202ENST00000553426 ACTC1P68032 377 aa10.34□□□□□ -0.75
LINC00643-202ENST00000553426 ACTA1P68133 377 aa10.34□□□□□ -0.75
LINC00643-202ENST00000553426 MEF2CQ06413 473 aaPredicted RBP10.34□□□□□ -0.75
LINC00643-202ENST00000553426 DYNC1I2Q13409 638 aaKnown RBP10.34□□□□□ -0.75
LINC00643-202ENST00000553426 FAM189A2Q15884 450 aa10.34□□□□□ -0.75
LINC00643-202ENST00000553426 TMEM244Q5VVB8 128 aa10.34□□□□□ -0.75
LINC00643-202ENST00000553426 KCTD20Q7Z5Y7 419 aa10.34□□□□□ -0.75
LINC00643-202ENST00000553426 OR8H2Q8N162 312 aa10.34□□□□□ -0.75
LINC00643-202ENST00000553426 DNAAF1Q8NEP3 725 aa10.34□□□□□ -0.75
LINC00643-202ENST00000553426 RPS4Y2Q8TD47 263 aa10.34□□□□□ -0.75
LINC00643-202ENST00000553426 TRUB1Q8WWH5 349 aaKnown RBP10.34□□□□□ -0.75
LINC00643-202ENST00000553426 AJUBAQ96IF1 538 aa10.34□□□□□ -0.75
LINC00643-202ENST00000553426 MYCBPQ99417 103 aaPredicted RBP10.34□□□□□ -0.75
LINC00643-202ENST00000553426 OAZ3Q9UMX2 235 aa10.34□□□□□ -0.75
LINC00643-202ENST00000553426 SIGLEC9Q9Y336 463 aa10.34□□□□□ -0.75
LINC00643-202ENST00000553426 FAM90A8PA6NJQ4 464 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 ZNF737O75373 536 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 HAND1O96004 215 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 IGHV1-8P0DP01 117 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 VSIG10L2P0DP72 767 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 ZNF20P17024 532 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 PRKACBP22694 351 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 PAX6P26367 422 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 POLR2IP36954 125 aaKnown RBP10.33□□□□□ -0.76
LINC00643-202ENST00000553426 DLX6P56179 175 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 MTCP1P56278 107 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 EDDM3AQ14507 147 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 GRK1Q15835 563 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 SSX2Q16385 188 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 PLA1AQ53H76 456 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 ARSJQ5FYB0 599 aaPredicted RBP10.33□□□□□ -0.76
LINC00643-202ENST00000553426 CRIP3Q6Q6R5 217 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 ZBTB49Q6ZSB9 765 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 LHFPL4Q7Z7J7 247 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 FAM58AQ8N1B3 248 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 PRSS35Q8N3Z0 413 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 KLHDC1Q8N7A1 406 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 OR11H6Q8NGC7 330 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 EME1Q96AY2 570 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 MRPL48Q96GC5 212 aaKnown RBP10.33□□□□□ -0.76
LINC00643-202ENST00000553426 SEBOXQ9HB31 216 aaPredicted RBP10.33□□□□□ -0.76
LINC00643-202ENST00000553426 NEK6Q9HC98 313 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 FOXJ3Q9UPW0 622 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 PCDHGB5Q9Y5G0 923 aa10.33□□□□□ -0.76
LINC00643-202ENST00000553426 TET2Q6N021 2002 aaPredicted RBP10.33□□□□□ -0.76
LINC00643-202ENST00000553426 RYR3Q15413 4870 aa10.32□□□□□ -0.76
LINC00643-202ENST00000553426 IGKV1-27A0A075B6S5 117 aa10.32□□□□□ -0.76
LINC00643-202ENST00000553426 DAPL1A0PJW8 107 aa10.32□□□□□ -0.76
LINC00643-202ENST00000553426 SAC3D1A6NKF1 404 aa10.32□□□□□ -0.76
LINC00643-202ENST00000553426 ODF3BA8MYP8 253 aa10.32□□□□□ -0.76
LINC00643-202ENST00000553426 F8VVB4 439 aa10.32□□□□□ -0.76
LINC00643-202ENST00000553426 F8VWA3 439 aa10.32□□□□□ -0.76
LINC00643-202ENST00000553426 CHST1O43916 411 aa10.32□□□□□ -0.76
LINC00643-202ENST00000553426 POU3F4P49335 361 aa10.32□□□□□ -0.76
LINC00643-202ENST00000553426 TP53I3Q53FA7 332 aa10.32□□□□□ -0.76
LINC00643-202ENST00000553426 SPIN3Q5JUX0 258 aa10.32□□□□□ -0.76
LINC00643-202ENST00000553426 MEDAGQ5VYS4 303 aa10.32□□□□□ -0.76
LINC00643-202ENST00000553426 ZNF626Q68DY1 528 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms