RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 DUX4L9Q6RFH8 374 aaPredicted RBP9.72□□□□□ -0.85
TRAFD1-209ENST00000552896 SAXO1Q8IYX7 474 aa9.72□□□□□ -0.85
TRAFD1-209ENST00000552896 OR5T2Q8NGG2 359 aa9.72□□□□□ -0.85
TRAFD1-209ENST00000552896 RAB40AQ8WXH6 277 aa9.72□□□□□ -0.85
TRAFD1-209ENST00000552896 ST8SIA4Q92187 359 aa9.72□□□□□ -0.85
TRAFD1-209ENST00000552896 SDSLQ96GA7 329 aa9.72□□□□□ -0.85
TRAFD1-209ENST00000552896 SPACA5Q96QH8 159 aa9.72□□□□□ -0.85
TRAFD1-209ENST00000552896 OR14A2Q96R54 314 aa9.72□□□□□ -0.85
TRAFD1-209ENST00000552896 NUDT16L1Q9BRJ7 211 aaKnown RBP9.72□□□□□ -0.85
TRAFD1-209ENST00000552896 CCDC90BQ9GZT6 254 aa9.72□□□□□ -0.85
TRAFD1-209ENST00000552896 RHOFQ9HBH0 211 aa9.72□□□□□ -0.85
TRAFD1-209ENST00000552896 ISYNA1Q9NPH2 558 aa9.72□□□□□ -0.85
TRAFD1-209ENST00000552896 CKLFQ9UBR5 152 aa9.72□□□□□ -0.85
TRAFD1-209ENST00000552896 DUX4Q9UBX2 424 aa9.72□□□□□ -0.85
TRAFD1-209ENST00000552896 RFPL4AA6NLU0 287 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 ZNF879B4DU55 563 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 RFPL4AL1F8VTS6 287 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 MAGEB3O15480 346 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 SPRY1O43609 319 aaPredicted RBP9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 GPX5O75715 221 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 KDM4BO94953 1096 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 FSHBP01225 129 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 SELLP14151 372 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 IGFBP3P17936 291 aaPredicted RBP9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 EEF1B2P24534 225 aaKnown RBP9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 SRP14P37108 136 aaKnown RBP9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 PAX8Q06710 450 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 MLLT11Q13015 90 aaPredicted RBP9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 SCGB2A2Q13296 93 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 IKZF1Q13422 519 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 GPR50Q13585 617 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 FIP1L1Q6UN15 594 aaKnown RBP9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 C1orf229Q6ZS94 237 aaPredicted RBP9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 ZNF367Q7RTV3 350 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 ZNF561Q8N587 486 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 MS4A15Q8N5U1 240 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 PNLDC1Q8NA58 520 aaKnown RBP9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 ZSCAN4Q8NAM6 433 aaPredicted RBP9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 OR51A2Q8NGJ7 313 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 UFD1Q92890 307 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 EMG1Q92979 244 aaKnown RBP9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 RFT1Q96AA3 541 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 DMRTB1Q96MA1 342 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 DERL3Q96Q80 235 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 YTHDF1Q9BYJ9 559 aaKnown RBP9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 C7orf69Q9H7B7 122 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 TMEM138Q9NPI0 162 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 SLC25A10Q9UBX3 287 aaPredicted RBP9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 OPN4Q9UHM6 478 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 AUP1Q9Y679 476 aa9.71□□□□□ -0.86
TRAFD1-209ENST00000552896 KIR2DS1A0A191URI9 304 aa9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 F8VVB4 439 aa9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 F8VWA3 439 aa9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 AVPP01185 164 aa9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 TFF1P04155 84 aa9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 ALDOBP05062 364 aa9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 LIPFP07098 398 aa9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 BCL3P20749 454 aa9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 BDKRB2P30411 391 aa9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 GABRA2P47869 451 aa9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 DGUOKQ16854 277 aa9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 ARMCX4Q5H9R4 360 aa9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 SPIN3Q5JUX0 258 aa9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 BTN2A1Q7KYR7 527 aa9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 FAM58AQ8N1B3 248 aa9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 BATF2Q8N1L9 274 aa9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 CD177Q8N6Q3 437 aa9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 TMEM185AQ8NFB2 350 aa9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 OR5D18Q8NGL1 313 aa9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 C8orf46Q8TAG6 207 aa9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 SEBOXQ9HB31 216 aaPredicted RBP9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 RBFOX1Q9NWB1 397 aaKnown RBP9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 RPUSD1Q9UJJ7 312 aaKnown RBP9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 FOXJ3Q9UPW0 622 aa9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 ATRQ13535 2644 aa9.7□□□□□ -0.86
TRAFD1-209ENST00000552896 TRAV8-7A0A075B6U6 113 aa9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 TRBV23-1A0A0A0MS06 115 aa9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 IGKV1-12A0A0C4DH73 117 aa9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 GABRPO00591 440 aa9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 ANGPTL7O43827 346 aa9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 SC5DO75845 299 aa9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 IGKV1D-12P01611 117 aa9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 CPEP16870 476 aa9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 PSMA1P25786 263 aaKnown RBP9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 PRDX2P32119 198 aa9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 MAP2K4P45985 399 aa9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 NPBWR2P48146 333 aa9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 CEBPDP49716 269 aaPredicted RBP9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 BMXP51813 675 aa9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 TPBGQ13641 420 aa9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 ZNF146Q15072 292 aa9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 TRAM1Q15629 374 aa9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 DDI2Q5TDH0 399 aa9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 LIPKQ5VXJ0 399 aa9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 RNF144BQ7Z419 303 aa9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 FGFRL1Q8N441 504 aa9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 SVOPQ8N4V2 548 aa9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 KIR3DL3Q8N743 410 aa9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 NKAIN3Q8N8D7 197 aa9.69□□□□□ -0.86
TRAFD1-209ENST00000552896 ZNRF1Q8ND25 227 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms