RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 CBLN3Q6UW01 205 aa14.05□□□□□ -0.16
RBFOX1-212ENST00000550418 MRPL24Q96A35 216 aaKnown RBP14.05□□□□□ -0.16
RBFOX1-212ENST00000550418 FAM173AQ9BQD7 235 aa14.05□□□□□ -0.16
RBFOX1-212ENST00000550418 TMEM9BQ9NQ34 198 aa14.05□□□□□ -0.16
RBFOX1-212ENST00000550418 CCDC88CQ9P219 2028 aa14.05□□□□□ -0.16
RBFOX1-212ENST00000550418 AMTP48728 403 aa14.05□□□□□ -0.16
RBFOX1-212ENST00000550418 SULT1A2P50226 295 aa14.05□□□□□ -0.16
RBFOX1-212ENST00000550418 PDCD1Q15116 288 aa14.05□□□□□ -0.16
RBFOX1-212ENST00000550418 PRSS41Q7RTY9 318 aa14.05□□□□□ -0.16
RBFOX1-212ENST00000550418 ANXA10Q9UJ72 324 aa14.05□□□□□ -0.16
RBFOX1-212ENST00000550418 CKAP5Q14008 2032 aa14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 MPZL1O95297 269 aa14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 KRASP01116 189 aa14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 MBPP02686 304 aaPredicted RBP14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 RPLP1P05386 114 aaKnown RBP14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 CD1AP06126 327 aa14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 USF1P22415 310 aaPredicted RBP14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 FCER1GP30273 86 aa14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 ASB5Q8WWX0 329 aa14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 NOL4LQ96MY1 436 aaPredicted RBP14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 SMDT1Q9H4I9 107 aa14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 KCNAB3O43448 404 aa14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 CAPZBP47756 277 aa14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 Q6ZN92 141 aa14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 UBALD2Q8IYN6 164 aa14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 FGF14Q92915 247 aa14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 SLC25A22Q9H936 323 aa14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 CT62P0C5K7 136 aa14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 RCC1P18754 421 aaPredicted RBP14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 DYNLT3P51808 116 aa14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 NANOS3P60323 173 aaKnown RBP14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 TBC1D28Q2M2D7 210 aa14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 MESTQ5EB52 335 aa14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 PRR27Q6MZM9 219 aa14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 YRDCQ86U90 279 aaKnown RBP14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 FAM219AQ8IW50 185 aa14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 ANKRD10Q9NXR5 420 aa14.04□□□□□ -0.16
RBFOX1-212ENST00000550418 PQLC2LA1A4F0 135 aa14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 CRISP2P16562 243 aa14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 H2BFSP57053 126 aa14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 LIAT1Q6ZQX7 453 aa14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 EP400Q96L91 3159 aa14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 C5orf49A4QMS7 147 aa14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 BCAT2O15382 392 aaPredicted RBP14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 FUT7Q11130 342 aa14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 MPV17LQ2QL34 196 aa14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 TSPO2Q5TGU0 170 aa14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 PECRQ9BY49 303 aa14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 MSL2Q9HCI7 577 aa14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 RECKO95980 971 aa14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 B4GALT1P15291 398 aa14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 DYRK2Q92630 601 aa14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 YTHDF2Q9Y5A9 579 aaKnown RBP14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 TRBV23-1A0A0A0MS06 115 aa14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 ENSAO43768 121 aaKnown RBP14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 TTRP02766 147 aa14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 OR10J1P30954 320 aa14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 PARM1Q6UWI2 310 aa14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 TIPARPQ7Z3E1 657 aaKnown RBP14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 ROBO4Q8WZ75 1007 aa14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 CACNG5Q9UF02 275 aa14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 DUSP13Q9UII6 198 aa14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 FUT9Q9Y231 359 aa14.03□□□□□ -0.16
RBFOX1-212ENST00000550418 PDCD6O75340 191 aa14.02□□□□□ -0.16
RBFOX1-212ENST00000550418 OR2A4O95047 310 aa14.02□□□□□ -0.16
RBFOX1-212ENST00000550418 ZBTB25P24278 435 aa14.02□□□□□ -0.16
RBFOX1-212ENST00000550418 SUB1P53999 127 aaKnown RBP eCLIP14.02□□□□□ -0.16
RBFOX1-212ENST00000550418 ZNF816Q0VGE8 651 aaPredicted RBP14.02□□□□□ -0.16
RBFOX1-212ENST00000550418 CLN3Q13286 438 aa14.02□□□□□ -0.16
RBFOX1-212ENST00000550418 OR5I1Q13606 314 aa14.02□□□□□ -0.16
RBFOX1-212ENST00000550418 EXT1Q16394 746 aa14.02□□□□□ -0.16
RBFOX1-212ENST00000550418 FAM122AQ96E09 287 aa14.02□□□□□ -0.16
RBFOX1-212ENST00000550418 OR2A7Q96R45 310 aa14.02□□□□□ -0.16
RBFOX1-212ENST00000550418 PLRG1O43660 514 aaKnown RBP14.02□□□□□ -0.16
RBFOX1-212ENST00000550418 MYBPHQ13203 477 aa14.02□□□□□ -0.16
RBFOX1-212ENST00000550418 VAX2Q9UIW0 290 aa14.02□□□□□ -0.16
RBFOX1-212ENST00000550418 ERRFI1Q9UJM3 462 aaPredicted RBP14.02□□□□□ -0.16
RBFOX1-212ENST00000550418 ATAD5Q96QE3 1844 aa14.02□□□□□ -0.16
RBFOX1-212ENST00000550418 SIPA1L1O43166 1804 aa14.02□□□□□ -0.17
RBFOX1-212ENST00000550418 IGHV3-64DA0A0J9YX35 117 aa14.02□□□□□ -0.17
RBFOX1-212ENST00000550418 TERTO14746 1132 aaKnown RBP14.02□□□□□ -0.17
RBFOX1-212ENST00000550418 SPINK4O60575 86 aa14.02□□□□□ -0.17
RBFOX1-212ENST00000550418 CT45A10P0DMU9 189 aa14.02□□□□□ -0.17
RBFOX1-212ENST00000550418 ZNF880Q6PDB4 577 aa14.02□□□□□ -0.17
RBFOX1-212ENST00000550418 OR11L1Q8NGX0 322 aa14.02□□□□□ -0.17
RBFOX1-212ENST00000550418 CLDN23Q96B33 292 aa14.02□□□□□ -0.17
RBFOX1-212ENST00000550418 ANAPC16Q96DE5 110 aa14.02□□□□□ -0.17
RBFOX1-212ENST00000550418 SLC25A38Q96DW6 304 aa14.02□□□□□ -0.17
RBFOX1-212ENST00000550418 UTP23Q9BRU9 249 aaKnown RBP14.02□□□□□ -0.17
RBFOX1-212ENST00000550418 ICAM5Q9UMF0 924 aa14.02□□□□□ -0.17
RBFOX1-212ENST00000550418 IGHV3-15A0A0B4J1V0 119 aa14.02□□□□□ -0.17
RBFOX1-212ENST00000550418 OR5G3P0C626 314 aa14.02□□□□□ -0.17
RBFOX1-212ENST00000550418 FAM3AP98173 230 aa14.02□□□□□ -0.17
RBFOX1-212ENST00000550418 ZNF154Q13106 437 aa14.02□□□□□ -0.17
RBFOX1-212ENST00000550418 PABPC1L2AQ5JQF8 200 aa14.02□□□□□ -0.17
RBFOX1-212ENST00000550418 NUFIP2Q7Z417 695 aaKnown RBP14.02□□□□□ -0.17
RBFOX1-212ENST00000550418 OR10G4Q8NGN3 311 aa14.02□□□□□ -0.17
RBFOX1-212ENST00000550418 OR10G9Q8NGN4 311 aa14.02□□□□□ -0.17
RBFOX1-212ENST00000550418 OR10G7Q8NGN6 311 aa14.02□□□□□ -0.17
RBFOX1-212ENST00000550418 PGLYRP3Q96LB9 341 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms