RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 C4orf36Q96KX1 117 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 TECTBQ96PL2 329 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 MYCBPQ99417 103 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-217ENST00000548420 NUDT16L1Q9BRJ7 211 aaKnown RBP11.41□□□□□ -0.58
PTCH1-217ENST00000548420 GPR173Q9NS66 373 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 ERVK13-1Q9NX77 482 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 FBLN5Q9UBX5 448 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 H0YAE9 185 aa11.4□□□□□ -0.58
PTCH1-217ENST00000548420 DVL1O14640 695 aa11.4□□□□□ -0.58
PTCH1-217ENST00000548420 LIPFP07098 398 aa11.4□□□□□ -0.58
PTCH1-217ENST00000548420 LIMS3P0CW19 117 aa11.4□□□□□ -0.58
PTCH1-217ENST00000548420 LIMS4P0CW20 117 aa11.4□□□□□ -0.58
PTCH1-217ENST00000548420 IL18R1Q13478 541 aa11.4□□□□□ -0.58
PTCH1-217ENST00000548420 DHRS7BQ6IAN0 325 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-217ENST00000548420 HAGHLQ6PII5 290 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-217ENST00000548420 BTNL3Q6UXE8 466 aa11.4□□□□□ -0.58
PTCH1-217ENST00000548420 GDPGP1Q6ZNW5 385 aa11.4□□□□□ -0.58
PTCH1-217ENST00000548420 ZNF788Q6ZQV5 615 aa11.4□□□□□ -0.58
PTCH1-217ENST00000548420 RNF144BQ7Z419 303 aa11.4□□□□□ -0.58
PTCH1-217ENST00000548420 LY6G5BQ8NDX9 201 aa11.4□□□□□ -0.58
PTCH1-217ENST00000548420 R3HDM4Q96D70 268 aa11.4□□□□□ -0.58
PTCH1-217ENST00000548420 DMRTB1Q96MA1 342 aa11.4□□□□□ -0.58
PTCH1-217ENST00000548420 CCL13Q99616 98 aa11.4□□□□□ -0.58
PTCH1-217ENST00000548420 ADI1Q9BV57 179 aa11.4□□□□□ -0.58
PTCH1-217ENST00000548420 ALG8Q9BVK2 526 aa11.4□□□□□ -0.58
PTCH1-217ENST00000548420 CHST5Q9GZS9 411 aa11.4□□□□□ -0.58
PTCH1-217ENST00000548420 ISG20L2Q9H9L3 353 aaKnown RBP11.4□□□□□ -0.58
PTCH1-217ENST00000548420 RASL12Q9NYN1 266 aa11.4□□□□□ -0.58
PTCH1-217ENST00000548420 HSPE1-MOB4S4R3N1 261 aa11.4□□□□□ -0.58
PTCH1-217ENST00000548420 PLECQ15149 4684 aaKnown RBP11.39□□□□□ -0.59
PTCH1-217ENST00000548420 A0A1B0GW55 424 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 LOC107986453A0A1B0GWG9 222 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 ANKRD61A6NGH8 418 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 J3QT63 122 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 ENSAO43768 121 aaKnown RBP11.39□□□□□ -0.59
PTCH1-217ENST00000548420 ECDO95905 644 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-217ENST00000548420 HTR1AP08908 422 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 DUX4L2P0CJ85 424 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 DUX4L3P0CJ86 424 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 DUX4L4P0CJ87 422 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 DUX4L5P0CJ88 424 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 DUX4L6P0CJ89 424 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 DUX4L7P0CJ90 424 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 PGA5P0DJD9 388 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 DCKP27707 260 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 EFNB2P52799 333 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 FGF12P61328 243 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 ERVK11-1P61568 191 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 MRPL28Q13084 256 aaKnown RBP11.39□□□□□ -0.59
PTCH1-217ENST00000548420 ALKBH1Q13686 389 aaKnown RBP11.39□□□□□ -0.59
PTCH1-217ENST00000548420 GPR157Q5UAW9 335 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 DUX4L9Q6RFH8 374 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-217ENST00000548420 SLC36A1Q7Z2H8 476 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 POC1AQ8NBT0 407 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 OR5T2Q8NGG2 359 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 CNIH3Q8TBE1 160 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 FBLIM1Q8WUP2 373 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 CYGBQ8WWM9 190 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 PP6455Q8WZ26 134 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 PKIBQ9C010 78 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 CNTD2Q9H8S5 307 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 NLKQ9UBE8 527 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 DUX4Q9UBX2 424 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 ZNF222Q9UK12 451 aa11.39□□□□□ -0.59
PTCH1-217ENST00000548420 IGKV1D-17A0A075B6S4 117 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 IGKV1-27A0A075B6S5 117 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 OR2AT4A6NND4 320 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 E9PI62 339 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 SYNGR1O43759 233 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 PSG2P11465 335 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 LYL1P12980 280 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 MMP9P14780 707 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 GLRA1P23415 457 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 CAPGP40121 348 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 HAAOP46952 286 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 FUT6P51993 359 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 BPIFB3P59826 476 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 EGFEM1PQ0D2K5 195 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 LAIR2Q6ISS4 152 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 UTS2BQ765I0 119 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 BTN2A1Q7KYR7 527 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 LDLRAD3Q86YD5 345 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 CALHM1Q8IU99 346 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 FGFRL1Q8N441 504 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 FAM216BQ8N7L0 139 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 SETD9Q8NE22 299 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 DNAAF1Q8NEP3 725 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 C8orf46Q8TAG6 207 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 RPS4Y2Q8TD47 263 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 HAVCR2Q8TDQ0 301 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 ADAT3Q96EY9 351 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-217ENST00000548420 MED30Q96HR3 178 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 GAFA1Q96PS6 74 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 NRIP2Q9BQI9 281 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 HES4Q9HCC6 221 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 SNTG1Q9NSN8 517 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 DNAJB11Q9UBS4 358 aa11.38□□□□□ -0.59
PTCH1-217ENST00000548420 IGKV1-9A0A0C4DH69 117 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 A0A0U1RQK1 487 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 CENPVL3A0A0U1RRI6 287 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms