RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 IGHV1-18A0A0C4DH31 117 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 ZNF816-ZNF321PA0A0X1KG74 233 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 A0A1W2PRV1 198 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 CIB4A0PJX0 185 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 C5orf49A4QMS7 147 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 MFSD2BA6NFX1 497 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 A6NJ64 397 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 ZNF98A6NK75 572 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 ANXA2P2A6NMY6 339 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 TRIM77I1YAP6 450 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 RAB27BO00194 218 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 CTDSPLO15194 276 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 LMX1BO60663 402 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 TNFRSF6BO95407 300 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 LCATP04180 440 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 FABP1P07148 127 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 RAB3AP20336 220 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 AGAP20933 346 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 VAMP2P63027 116 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 SORDQ00796 357 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 RIPPLY1Q0D2K3 151 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 PMPCAQ10713 525 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 MRPL49Q13405 166 aaKnown RBP7.21□□□□□ -1.26
VPS29-203ENST00000546588 GK2Q14410 553 aaPredicted RBP7.21□□□□□ -1.26
VPS29-203ENST00000546588 ODF4Q2M2E3 257 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 UBE2NLQ5JXB2 153 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 SPANXN2Q5MJ10 180 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 MTFR2Q6P444 385 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 UNQ6126/PRO20091Q6UXV3 157 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 BAIAP2L2Q6UXY1 529 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 Q6ZNX1 250 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 ZNF101Q8IZC7 436 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 PAQR4Q8N4S7 273 aaPredicted RBP7.21□□□□□ -1.26
VPS29-203ENST00000546588 OR51A2Q8NGJ7 313 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 OR5L1Q8NGL2 311 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 RAB40AQ8WXH6 277 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 RFT1Q96AA3 541 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 FGGYQ96C11 551 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 ORAI1Q96D31 301 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 HAVCR1Q96D42 359 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 SORCS2Q96PQ0 1159 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 NEU1Q99519 415 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 SDHCQ99643 169 aaPredicted RBP7.21□□□□□ -1.26
VPS29-203ENST00000546588 SRRQ9GZT4 340 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 RNF121Q9H920 327 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 PLGRKTQ9HBL7 147 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 ABCB9Q9NP78 766 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 IL36GQ9NZH8 169 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 OR5V1Q9UGF6 321 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 DAPK2Q9UIK4 370 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 AK6Q9Y3D8 172 aaKnown RBP7.21□□□□□ -1.26
VPS29-203ENST00000546588 PKD1L2Q7Z442 2459 aa7.21□□□□□ -1.26
VPS29-203ENST00000546588 HEATR1Q9H583 2144 aaKnown RBP7.21□□□□□ -1.26
VPS29-203ENST00000546588 hCG_1809904A0A1W2PP81 198 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 A0A1W2PPE2 198 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 A0A1W2PPK0 400 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 A0A1W2PR64 198 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 UBE2QL1A1L167 161 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 IQCF6A8MYZ5 107 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 CTAG2O75638 210 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 AGFG2O95081 481 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 DIRAS3O95661 229 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 MAS1P04201 325 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 CECR9P0C854 216 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 UBBP0CG47 229 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 SLC2A2P11168 524 aaPredicted RBP7.2□□□□□ -1.26
VPS29-203ENST00000546588 ZNF20P17024 532 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 ELK1P19419 428 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 HTR2CP28335 458 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 CD1BP29016 333 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 CHRNB4P30926 498 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 ASCL1P50553 236 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 ZP1P60852 638 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 LY6DQ14210 128 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 UBE2V2Q15819 145 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 PYHIN1Q6K0P9 492 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 XKRXQ6PP77 449 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 ASCL4Q6XD76 172 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 OR2W3Q7Z3T1 314 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 GDPD1Q8N9F7 314 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 OR52N4Q8NGI2 321 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 OR2AE1Q8NHA4 323 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 TRMT10AQ8TBZ6 339 aaKnown RBP7.2□□□□□ -1.26
VPS29-203ENST00000546588 LGALS14Q8TCE9 139 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 CPNE2Q96FN4 548 aaPredicted RBP7.2□□□□□ -1.26
VPS29-203ENST00000546588 PAPOLGQ9BWT3 736 aaKnown RBP7.2□□□□□ -1.26
VPS29-203ENST00000546588 BCL2L14Q9BZR8 327 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 TINAGL1Q9GZM7 467 aaPredicted RBP7.2□□□□□ -1.26
VPS29-203ENST00000546588 METTL8Q9H825 291 aaKnown RBP7.2□□□□□ -1.26
VPS29-203ENST00000546588 PLEKHA1Q9HB21 404 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 UFSP2Q9NUQ7 469 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 MRPL15Q9P015 296 aaKnown RBP7.2□□□□□ -1.26
VPS29-203ENST00000546588 PIGLQ9Y2B2 252 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 KLF2Q9Y5W3 355 aaPredicted RBP7.2□□□□□ -1.26
VPS29-203ENST00000546588 COL6A6A6NMZ7 2263 aa7.2□□□□□ -1.26
VPS29-203ENST00000546588 CHD8Q9HCK8 2581 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 PIEZO2Q9H5I5 2752 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 IGLV3-9A0A075B6K5 115 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 A0A087WWL8 130 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 IGHV2OR16-5A0A0B4J2B6 119 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms