RNA–Protein interactions for RNA: ENST00000546088.5

TAF1D-222, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit D, human

TSL 3

Gene TAF1D, Length 1,728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1D-222	ENST00000546088	RIPPLY3	P57055	190 aa		5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	PRB3	Q04118	309 aa	Predicted RBP	5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	MZT1	Q08AG7	82 aa		5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	FOXE3	Q13461	319 aa		5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	PDCD1	Q15116	288 aa		5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	SPHAR	Q15513	63 aa		5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	ZNF404	Q494X3	552 aa		5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	RBM48	Q5RL73	367 aa	Known RBP	5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	FAM27D1	Q5T7N8	215 aa		5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	LIPK	Q5VXJ0	399 aa		5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	DMKN	Q6E0U4	476 aa	Predicted RBP	5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	SLC25A26	Q70HW3	274 aa		5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	FAM216B	Q8N7L0	139 aa		5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088		Q8TCH9	128 aa		5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	AQP3	Q92482	292 aa		5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	SMIM19	Q96E16	107 aa		5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	PGLYRP3	Q96LB9	341 aa		5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	MYCBP	Q99417	103 aa	Predicted RBP	5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	MND1	Q9BWT6	205 aa		5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	DUSP21	Q9H596	190 aa		5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	ELL3	Q9HB65	397 aa	Predicted RBP	5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	PATZ1	Q9HBE1	687 aa	Known RBP	5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	NEK6	Q9HC98	313 aa		5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	SMURF1	Q9HCE7	757 aa		5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	HIF1AN	Q9NWT6	349 aa		5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	LSM2	Q9Y333	95 aa	Known RBP	5.36	□□□□□ -1.55
TAF1D-222	ENST00000546088	ANK3	Q12955	4377 aa	Known RBP	5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	TRAV8-7	A0A075B6U6	113 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	OR5B21	A6NL26	309 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	TRAPPC2L	H3BP13	241 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	LGALS8	O00214	317 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	GATB	O75879	557 aa	Known RBP	5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	NXPH2	O95156	264 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	LHB	P01229	141 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	MAS1	P04201	325 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	MSMB	P08118	114 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	WNT2	P09544	360 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	ZNF12	P17014	697 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	AMY2B	P19961	511 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	BCL3	P20749	454 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	GZMK	P49863	264 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	FUT6	P51993	359 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	RPS11	P62280	158 aa	Known RBP eCLIP	5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	RPS25	P62851	125 aa	Known RBP	5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	GNB2	P62879	340 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	IRF3	Q14653	427 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	CNN3	Q15417	329 aa	Known RBP	5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	MICB	Q29980	383 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	ZNF181	Q2M3W8	571 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	CR1L	Q2VPA4	569 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	CCDC58	Q4VC31	144 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	FAM76B	Q5HYJ3	339 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	FAM166A	Q6J272	317 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088		Q6ZSR3	168 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	SERPINA12	Q8IW75	414 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	SPIC	Q8N5J4	248 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	ZNRF1	Q8ND25	227 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	DNAAF1	Q8NEP3	725 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	OR52N4	Q8NGI2	321 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	OR10K1	Q8NGX5	313 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	GPR148	Q8TDV2	347 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	PP6455	Q8WZ26	134 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	ST8SIA4	Q92187	359 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	ERGIC1	Q969X5	290 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	TMIGD2	Q96BF3	282 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	RAB39B	Q96DA2	213 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	OPALIN	Q96PE5	141 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	GPER1	Q99527	375 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	CDCA4	Q9BXL8	241 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	FAM192A	Q9GZU8	254 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	RBFOX1	Q9NWB1	397 aa	Known RBP	5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	ING3	Q9NXR8	418 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	MTCH1	Q9NZJ7	389 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	KCNS2	Q9ULS6	477 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	TNFRSF18	Q9Y5U5	241 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	DOCK11	Q5JSL3	2073 aa		5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	SON	P18583	2426 aa	Known RBP	5.35	□□□□□ -1.55
TAF1D-222	ENST00000546088	IGHV3OR16-10	A0A075B7F0	116 aa		5.34	□□□□□ -1.55
TAF1D-222	ENST00000546088	TRAV38-1	A0A0B4J264	116 aa		5.34	□□□□□ -1.55
TAF1D-222	ENST00000546088	IGKV1-12	A0A0C4DH73	117 aa		5.34	□□□□□ -1.55
TAF1D-222	ENST00000546088	RFPL4A	A6NLU0	287 aa		5.34	□□□□□ -1.55
TAF1D-222	ENST00000546088	OR2AT4	A6NND4	320 aa		5.34	□□□□□ -1.55
TAF1D-222	ENST00000546088	DHRS7C	A6NNS2	312 aa		5.34	□□□□□ -1.55
TAF1D-222	ENST00000546088	SRRM5	B3KS81	715 aa		5.34	□□□□□ -1.55
TAF1D-222	ENST00000546088		B4DSR2	109 aa		5.34	□□□□□ -1.55
TAF1D-222	ENST00000546088	RFPL4AL1	F8VTS6	287 aa		5.34	□□□□□ -1.55
TAF1D-222	ENST00000546088		J3QT63	122 aa		5.34	□□□□□ -1.55
TAF1D-222	ENST00000546088	DVL1	O14640	695 aa		5.34	□□□□□ -1.55
TAF1D-222	ENST00000546088	PIN1P1	O15428	100 aa		5.34	□□□□□ -1.55
TAF1D-222	ENST00000546088	SULT1B1	O43704	296 aa		5.34	□□□□□ -1.55
TAF1D-222	ENST00000546088	IGKV1D-12	P01611	117 aa		5.34	□□□□□ -1.55
TAF1D-222	ENST00000546088	PITPNB	P48739	271 aa		5.34	□□□□□ -1.55
TAF1D-222	ENST00000546088	RBP2	P50120	134 aa		5.34	□□□□□ -1.55
TAF1D-222	ENST00000546088	ATP1B3	P54709	279 aa		5.34	□□□□□ -1.55
TAF1D-222	ENST00000546088	DLX1	P56177	255 aa		5.34	□□□□□ -1.55
TAF1D-222	ENST00000546088	EMX1	Q04741	257 aa	Predicted RBP	5.34	□□□□□ -1.55
TAF1D-222	ENST00000546088	SCN1B	Q07699	218 aa		5.34	□□□□□ -1.55
TAF1D-222	ENST00000546088	MRPL28	Q13084	256 aa	Known RBP	5.34	□□□□□ -1.55
TAF1D-222	ENST00000546088	TMEM155	Q4W5P6	130 aa		5.34	□□□□□ -1.55
TAF1D-222	ENST00000546088	ESCO2	Q56NI9	601 aa		5.34	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms