RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 ZNF160Q9HCG1 818 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 SLC2A9Q9NRM0 540 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 KIAA1456Q9P272 454 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 LIPGQ9Y5X9 500 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 B3GALT1Q9Y5Z6 326 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 CHD9Q3L8U1 2897 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 ELOA3CA0A087WX78 387 aaPredicted RBP12.39□□□□□ -0.43
SRP54-202ENST00000546080 TGIF2-C20orf24A0A0A6YYL0 155 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 OPN1LWP04000 364 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 QDPRP09417 244 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 ZNF41P51814 821 aaPredicted RBP12.39□□□□□ -0.43
SRP54-202ENST00000546080 ERVFRD-1P60508 538 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 RNF4P78317 190 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 MRPS21P82921 87 aaKnown RBP12.39□□□□□ -0.43
SRP54-202ENST00000546080 RSU1Q15404 277 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 KIAA0895LQ68EN5 471 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 SPSB3Q6PJ21 355 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 THAP3Q8WTV1 239 aaPredicted RBP12.39□□□□□ -0.43
SRP54-202ENST00000546080 GTF3AQ92664 365 aaKnown RBP12.39□□□□□ -0.43
SRP54-202ENST00000546080 TVP23CQ96ET8 276 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 ABHD14AQ9BUJ0 271 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 SIRT7Q9NRC8 400 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 SDHAF3Q9NRP4 125 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 PIGLQ9Y2B2 252 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 V9GYS6 101 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 THADAQ6YHU6 1953 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 CXorf65A6NEN9 183 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 H3BMH7 237 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 PHF1O43189 567 aaPredicted RBP12.39□□□□□ -0.43
SRP54-202ENST00000546080 TRAF3IP2O43734 574 aaPredicted RBP12.39□□□□□ -0.43
SRP54-202ENST00000546080 IGLV3-1P01715 115 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 KCNMB1Q16558 191 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 TMEM176BQ3YBM2 270 aaPredicted RBP12.39□□□□□ -0.43
SRP54-202ENST00000546080 Q3ZCU0 254 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 C1orf189Q5VU69 101 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 HIST3H2BBQ8N257 126 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 OR2C3Q8N628 320 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 MSI2Q96DH6 328 aaKnown RBP12.39□□□□□ -0.43
SRP54-202ENST00000546080 KLHDC7BQ96G42 594 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 SYT3Q9BQG1 590 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 NIPSNAP3BQ9BS92 247 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 GPR61Q9BZJ8 451 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 UCK1Q9HA47 277 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 GPR27Q9NS67 375 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 RFNGQ9Y644 331 aa12.39□□□□□ -0.43
SRP54-202ENST00000546080 IGHV3-20A0A0C4DH32 117 aa12.38□□□□□ -0.43
SRP54-202ENST00000546080 A0A1B0GV90 55 aa12.38□□□□□ -0.43
SRP54-202ENST00000546080 FAM230AA0A1W2PPH8 454 aa12.38□□□□□ -0.43
SRP54-202ENST00000546080 FAM24AA6NFZ4 105 aa12.38□□□□□ -0.43
SRP54-202ENST00000546080 F5H5K5 113 aa12.38□□□□□ -0.43
SRP54-202ENST00000546080 RPL36A-HNRNPH2H7BZ11 118 aa12.38□□□□□ -0.43
SRP54-202ENST00000546080 EFNA2O43921 213 aa12.38□□□□□ -0.43
SRP54-202ENST00000546080 PITX3O75364 302 aa12.38□□□□□ -0.43
SRP54-202ENST00000546080 TRGC2P03986 189 aa12.38□□□□□ -0.43
SRP54-202ENST00000546080 SOD3P08294 240 aa12.38□□□□□ -0.43
SRP54-202ENST00000546080 RNF224P0DH78 156 aa12.38□□□□□ -0.43
SRP54-202ENST00000546080 DTYMKP23919 212 aa12.38□□□□□ -0.43
SRP54-202ENST00000546080 ARL4DP49703 201 aa12.38□□□□□ -0.43
SRP54-202ENST00000546080 CHAF1BQ13112 559 aa12.38□□□□□ -0.43
SRP54-202ENST00000546080 DBX2Q6ZNG2 339 aa12.38□□□□□ -0.43
SRP54-202ENST00000546080 OR4D5Q8NGN0 318 aa12.38□□□□□ -0.43
SRP54-202ENST00000546080 OR13D1Q8NGV5 346 aa12.38□□□□□ -0.43
SRP54-202ENST00000546080 OR6X1Q8NH79 312 aa12.38□□□□□ -0.43
SRP54-202ENST00000546080 SGK3Q96BR1 496 aa12.38□□□□□ -0.43
SRP54-202ENST00000546080 CHRNA10Q9GZZ6 450 aa12.38□□□□□ -0.43
SRP54-202ENST00000546080 HSF4Q9ULV5 492 aa12.38□□□□□ -0.43
SRP54-202ENST00000546080 HS3ST3B1Q9Y662 390 aa12.38□□□□□ -0.43
SRP54-202ENST00000546080 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.37□□□□□ -0.43
SRP54-202ENST00000546080 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.37□□□□□ -0.43
SRP54-202ENST00000546080 ZNF726A6NNF4 738 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 BCAT2O15382 392 aaPredicted RBP12.37□□□□□ -0.43
SRP54-202ENST00000546080 SCAF4O95104 1147 aaKnown RBP12.37□□□□□ -0.43
SRP54-202ENST00000546080 GAMTQ14353 236 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 KHDC3LQ587J8 217 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 GFI1BQ5VTD9 330 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 MEX3BQ6ZN04 569 aaKnown RBP12.37□□□□□ -0.43
SRP54-202ENST00000546080 SHISA6Q6ZSJ9 500 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 REC114Q7Z4M0 266 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 FBXL14Q8N1E6 418 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 CYB561D1Q8N8Q1 229 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 ADPRHL1Q8NDY3 354 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 KLRF1Q9NZS2 232 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 CYP8B1Q9UNU6 501 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 SLCO1B1Q9Y6L6 691 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 ADAMTS9Q9P2N4 1935 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 CCDC187A0A096LP49 1063 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 A0A0U1RQV5 110 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 A0A1W2PNR3 127 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 OR5H15A6NDH6 313 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 OR5H1A6NKK0 313 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 TSTD3H0UI37 97 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 ST8SIA5O15466 376 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 HSPA12AO43301 675 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 PTBP3O95758 552 aaKnown RBP12.37□□□□□ -0.43
SRP54-202ENST00000546080 HSPB1P04792 205 aaKnown RBP12.37□□□□□ -0.43
SRP54-202ENST00000546080 GLIPR1P48060 266 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 CCR5P51681 352 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 PKIAP61925 76 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 ICAM4Q14773 271 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 TAF9Q16594 264 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms