RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 PHYHIPQ92561 330 aa17.05■□□□□ 0.32
HMGA2-211ENST00000545998 NR1H4Q96RI1 486 aaPredicted RBP17.05■□□□□ 0.32
HMGA2-211ENST00000545998 GPER1Q99527 375 aa17.05■□□□□ 0.32
HMGA2-211ENST00000545998 NKX3-1Q99801 234 aaPredicted RBP17.05■□□□□ 0.32
HMGA2-211ENST00000545998 SSBP3Q9BWW4 388 aaPredicted RBP17.05■□□□□ 0.32
HMGA2-211ENST00000545998 DUX4Q9UBX2 424 aa17.05■□□□□ 0.32
HMGA2-211ENST00000545998 POLR3KQ9Y2Y1 108 aaPredicted RBP17.05■□□□□ 0.32
HMGA2-211ENST00000545998 SETD2Q9BYW2 2564 aaPredicted RBP17.05■□□□□ 0.32
HMGA2-211ENST00000545998 PHF1O43189 567 aaPredicted RBP17.04■□□□□ 0.32
HMGA2-211ENST00000545998 FOXH1O75593 365 aa17.04■□□□□ 0.32
HMGA2-211ENST00000545998 FCN3O75636 299 aa17.04■□□□□ 0.32
HMGA2-211ENST00000545998 KDM4BO94953 1096 aa17.04■□□□□ 0.32
HMGA2-211ENST00000545998 TFF1P04155 84 aa17.04■□□□□ 0.32
HMGA2-211ENST00000545998 MAS1P04201 325 aa17.04■□□□□ 0.32
HMGA2-211ENST00000545998 TMEM225BP0DP42 221 aa17.04■□□□□ 0.32
HMGA2-211ENST00000545998 HSD17B12Q53GQ0 312 aa17.04■□□□□ 0.32
HMGA2-211ENST00000545998 CD200R1LQ6Q8B3 271 aa17.04■□□□□ 0.32
HMGA2-211ENST00000545998 ZNF788Q6ZQV5 615 aa17.04■□□□□ 0.32
HMGA2-211ENST00000545998 C1QL2Q7Z5L3 287 aa17.04■□□□□ 0.32
HMGA2-211ENST00000545998 GAFA1Q96PS6 74 aa17.04■□□□□ 0.32
HMGA2-211ENST00000545998 SMURF1Q9HCE7 757 aa17.04■□□□□ 0.32
HMGA2-211ENST00000545998 RBFOX1Q9NWB1 397 aaKnown RBP17.04■□□□□ 0.32
HMGA2-211ENST00000545998 CLN8Q9UBY8 286 aa17.04■□□□□ 0.32
HMGA2-211ENST00000545998 MXRA5Q9NR99 2828 aa17.04■□□□□ 0.32
HMGA2-211ENST00000545998 FN1P02751 2386 aaKnown RBP17.04■□□□□ 0.32
HMGA2-211ENST00000545998 TRIM64CA6NLI5 447 aa17.03■□□□□ 0.32
HMGA2-211ENST00000545998 RFPL4AA6NLU0 287 aa17.03■□□□□ 0.32
HMGA2-211ENST00000545998 RFPL4AL1F8VTS6 287 aa17.03■□□□□ 0.32
HMGA2-211ENST00000545998 KNG1P01042 644 aa17.03■□□□□ 0.32
HMGA2-211ENST00000545998 SRMP19623 302 aa17.03■□□□□ 0.32
HMGA2-211ENST00000545998 NPY4RP50391 375 aa17.03■□□□□ 0.32
HMGA2-211ENST00000545998 DVL1P1P54792 670 aaPredicted RBP17.03■□□□□ 0.32
HMGA2-211ENST00000545998 GNB2P62879 340 aa17.03■□□□□ 0.32
HMGA2-211ENST00000545998 WDR25Q64LD2 544 aaPredicted RBP17.03■□□□□ 0.32
HMGA2-211ENST00000545998 SLC36A1Q7Z2H8 476 aa17.03■□□□□ 0.32
HMGA2-211ENST00000545998 LRRTM1Q86UE6 522 aa17.03■□□□□ 0.32
HMGA2-211ENST00000545998 FAM216BQ8N7L0 139 aa17.03■□□□□ 0.32
HMGA2-211ENST00000545998 PXT1Q8NFP0 134 aa17.03■□□□□ 0.32
HMGA2-211ENST00000545998 TNFAIP8L1Q8WVP5 186 aa17.03■□□□□ 0.32
HMGA2-211ENST00000545998 MUL1Q969V5 352 aa17.03■□□□□ 0.32
HMGA2-211ENST00000545998 TMEM186Q96B77 213 aa17.03■□□□□ 0.32
HMGA2-211ENST00000545998 RHOFQ9HBH0 211 aa17.03■□□□□ 0.32
HMGA2-211ENST00000545998 TCF7L1Q9HCS4 588 aa17.03■□□□□ 0.32
HMGA2-211ENST00000545998 YAE1D1Q9NRH1 226 aa17.03■□□□□ 0.32
HMGA2-211ENST00000545998 HIF1ANQ9NWT6 349 aa17.03■□□□□ 0.32
HMGA2-211ENST00000545998 TRAV20A0A0B4J274 112 aa17.02■□□□□ 0.32
HMGA2-211ENST00000545998 NKX6-3A6NJ46 265 aa17.02■□□□□ 0.32
HMGA2-211ENST00000545998 SFTPBP07988 381 aa17.02■□□□□ 0.32
HMGA2-211ENST00000545998 ADRA2CP18825 462 aa17.02■□□□□ 0.32
HMGA2-211ENST00000545998 PTGFRP43088 359 aa17.02■□□□□ 0.32
HMGA2-211ENST00000545998 GABRA2P47869 451 aa17.02■□□□□ 0.32
HMGA2-211ENST00000545998 OR3A4PP47883 348 aa17.02■□□□□ 0.32
HMGA2-211ENST00000545998 ASCL4Q6XD76 172 aa17.02■□□□□ 0.32
HMGA2-211ENST00000545998 GLCCI1Q86VQ1 547 aa17.02■□□□□ 0.32
HMGA2-211ENST00000545998 LYPD6Q86Y78 171 aa17.02■□□□□ 0.32
HMGA2-211ENST00000545998 CDH26Q8IXH8 852 aa17.02■□□□□ 0.32
HMGA2-211ENST00000545998 FAM58AQ8N1B3 248 aa17.02■□□□□ 0.32
HMGA2-211ENST00000545998 CD177Q8N6Q3 437 aa17.02■□□□□ 0.32
HMGA2-211ENST00000545998 NKAIN3Q8N8D7 197 aa17.02■□□□□ 0.32
HMGA2-211ENST00000545998 EMG1Q92979 244 aaKnown RBP17.02■□□□□ 0.32
HMGA2-211ENST00000545998 SDSLQ96GA7 329 aa17.02■□□□□ 0.32
HMGA2-211ENST00000545998 DVL1O14640 695 aa17.02■□□□□ 0.31
HMGA2-211ENST00000545998 SIGLEC5O15389 551 aa17.02■□□□□ 0.31
HMGA2-211ENST00000545998 PRDX2P32119 198 aa17.02■□□□□ 0.31
HMGA2-211ENST00000545998 IL13RA1P78552 427 aa17.02■□□□□ 0.31
HMGA2-211ENST00000545998 PNLDC1Q8NA58 520 aaKnown RBP17.02■□□□□ 0.31
HMGA2-211ENST00000545998 MED30Q96HR3 178 aa17.02■□□□□ 0.31
HMGA2-211ENST00000545998 FAM192AQ9GZU8 254 aa17.02■□□□□ 0.31
HMGA2-211ENST00000545998 HMG20AQ9NP66 347 aa17.02■□□□□ 0.31
HMGA2-211ENST00000545998 IL36RNQ9UBH0 155 aa17.02■□□□□ 0.31
HMGA2-211ENST00000545998 NF1P21359 2839 aa17.01■□□□□ 0.31
HMGA2-211ENST00000545998 TRDV1A0A1B0GX56 115 aa17.01■□□□□ 0.31
HMGA2-211ENST00000545998 MEGF11A6BM72 1044 aa17.01■□□□□ 0.31
HMGA2-211ENST00000545998 A8MV72 311 aaPredicted RBP17.01■□□□□ 0.31
HMGA2-211ENST00000545998 ARL6IP5O75915 188 aa17.01■□□□□ 0.31
HMGA2-211ENST00000545998 SELLP14151 372 aa17.01■□□□□ 0.31
HMGA2-211ENST00000545998 GALP22466 123 aa17.01■□□□□ 0.31
HMGA2-211ENST00000545998 CEBPDP49716 269 aaPredicted RBP17.01■□□□□ 0.31
HMGA2-211ENST00000545998 DGUOKQ16854 277 aa17.01■□□□□ 0.31
HMGA2-211ENST00000545998 JAGN1Q8N5M9 183 aa17.01■□□□□ 0.31
HMGA2-211ENST00000545998 CNTD2Q9H8S5 307 aa17.01■□□□□ 0.31
HMGA2-211ENST00000545998 OR14J1Q9UGF5 321 aa17.01■□□□□ 0.31
HMGA2-211ENST00000545998 KCNS2Q9ULS6 477 aa17.01■□□□□ 0.31
HMGA2-211ENST00000545998 MAB21L2Q9Y586 359 aa17.01■□□□□ 0.31
HMGA2-211ENST00000545998 PPIAL4CA0A0B4J2A2 164 aa17■□□□□ 0.31
HMGA2-211ENST00000545998 CALCBP10092 127 aa17■□□□□ 0.31
HMGA2-211ENST00000545998 PRKACAP17612 351 aa17■□□□□ 0.31
HMGA2-211ENST00000545998 CALRP27797 417 aaKnown RBP17■□□□□ 0.31
HMGA2-211ENST00000545998 PAX2Q02962 417 aa17■□□□□ 0.31
HMGA2-211ENST00000545998 IKZF1Q13422 519 aa17■□□□□ 0.31
HMGA2-211ENST00000545998 ZNF146Q15072 292 aa17■□□□□ 0.31
HMGA2-211ENST00000545998 FGFRL1Q8N441 504 aa17■□□□□ 0.31
HMGA2-211ENST00000545998 SLITRK2Q9H156 845 aa17■□□□□ 0.31
HMGA2-211ENST00000545998 VCX3AQ9NNX9 186 aa17■□□□□ 0.31
HMGA2-211ENST00000545998 MMP26Q9NRE1 261 aa17■□□□□ 0.31
HMGA2-211ENST00000545998 OR5V1Q9UGF6 321 aa17■□□□□ 0.31
HMGA2-211ENST00000545998 METRNQ9UJH8 293 aa17■□□□□ 0.31
HMGA2-211ENST00000545998 CDRT1O95170 752 aa16.99■□□□□ 0.31
HMGA2-211ENST00000545998 ELP2Q6IA86 826 aa16.99■□□□□ 0.31
HMGA2-211ENST00000545998 ZNF561Q8N587 486 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms