RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 F5H5P2 479 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 LRP3O75074 770 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 ZNF32P17041 273 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 C1orf185Q5T7R7 199 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 OTPQ5XKR4 325 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 Q8IYB0 196 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 LGI3Q8N145 548 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 RFESDQ8TAC1 157 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 GALMQ96C23 342 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 NDFIP1Q9BT67 221 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 GAL3ST2Q9H3Q3 398 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 ISYNA1Q9NPH2 558 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 CYSLTR2Q9NS75 346 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 PLCXD1Q9NUJ7 323 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 RCE1Q9Y256 329 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 DOPEY1Q5JWR5 2465 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 MED12Q93074 2177 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 ZFP92A6NM28 416 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 FAM87AP0C7U9 286 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 BTF3P20290 206 aaKnown RBP7.63□□□□□ -1.19
CLIP1-218ENST00000545889 OR3A4PP47883 348 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 EVX1P49640 407 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 HCCSP53701 268 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 PPP1CBP62140 327 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 RELQ04864 619 aaPredicted RBP7.63□□□□□ -1.19
CLIP1-218ENST00000545889 EBPQ15125 230 aaKnown RBP7.63□□□□□ -1.19
CLIP1-218ENST00000545889 PRSS53Q2L4Q9 553 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 SLC25A30Q5SVS4 291 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 RNF165Q6ZSG1 346 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 LRRC28Q86X40 367 aaPredicted RBP7.63□□□□□ -1.19
CLIP1-218ENST00000545889 NIPSNAP1Q9BPW8 284 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 DDA1Q9BW61 102 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 ADAM19Q9H013 955 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 PIGMQ9H3S5 423 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.63□□□□□ -1.19
CLIP1-218ENST00000545889 ST3GAL6Q9Y274 331 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 COL4A3Q01955 1670 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 HELZP42694 1942 aaKnown RBP7.63□□□□□ -1.19
CLIP1-218ENST00000545889 FITM1A5D6W6 292 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 NKX2-2O95096 273 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 FBP1P09467 338 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 SHC1P29353 583 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 ALDH3B1P43353 468 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 GPM6AP51674 278 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 TAS2R60P59551 318 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 SPCS3P61009 180 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 MRPS34P82930 218 aaKnown RBP7.63□□□□□ -1.19
CLIP1-218ENST00000545889 ZNF117Q03924 483 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 ZNF658BQ4V348 819 aaPredicted RBP7.63□□□□□ -1.19
CLIP1-218ENST00000545889 MALSU1Q96EH3 234 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 ARV1Q9H2C2 271 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 UCK1Q9HA47 277 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 CMC2Q9NRP2 79 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 SIRT3Q9NTG7 399 aaPredicted RBP7.63□□□□□ -1.19
CLIP1-218ENST00000545889 THYN1Q9P016 225 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 AMMECR1Q9Y4X0 333 aaPredicted RBP7.63□□□□□ -1.19
CLIP1-218ENST00000545889 MDC1Q14676 2089 aaKnown RBP7.63□□□□□ -1.19
CLIP1-218ENST00000545889 TMPRSS2O15393 492 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 PRAF2O60831 178 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 SMPD2O60906 423 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 FAHP16930 419 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 ZNF121P58317 390 aaPredicted RBP7.63□□□□□ -1.19
CLIP1-218ENST00000545889 DMRTC1Q5HYR2 192 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 LRRTM1Q86UE6 522 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 TUSC5Q8IXB3 177 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 OR2M7Q8NG81 312 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 ZNF501Q96CX3 271 aaPredicted RBP7.63□□□□□ -1.19
CLIP1-218ENST00000545889 PCGF1Q9BSM1 259 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 TAS2R5Q9NYW4 299 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 A4GNTQ9UNA3 340 aa7.63□□□□□ -1.19
CLIP1-218ENST00000545889 CYR61O00622 381 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 IGF2P01344 180 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 ANKRD34CP0C6C1 535 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 MRPL19P49406 292 aaKnown RBP7.62□□□□□ -1.19
CLIP1-218ENST00000545889 FUT6P51993 359 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 HOXA4Q00056 320 aaPredicted RBP7.62□□□□□ -1.19
CLIP1-218ENST00000545889 DRAM2Q6UX65 266 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 WDR88Q6ZMY6 472 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 PRSS45Q7RTY3 260 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 LDLRAD3Q86YD5 345 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 FAM58AQ8N1B3 248 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 LYG1Q8N1E2 194 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 LGALS14Q8TCE9 139 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 FAM131CQ96AQ9 280 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 WDFY2Q96P53 400 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 GAR1Q9NY12 217 aaKnown RBP7.62□□□□□ -1.19
CLIP1-218ENST00000545889 LOC100289279A0A1B0GTE1 492 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 TMEM82A0PJX8 343 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 TMEM30CPA0ZSE6 113 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 RECKO95980 971 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 CCL3P10147 92 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 NUBP1P53384 320 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 DLX5P56178 289 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 OR10A3P58181 314 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 PMP22Q01453 160 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 C8orf82Q6P1X6 216 aaPredicted RBP7.62□□□□□ -1.19
CLIP1-218ENST00000545889 ZNF620Q6ZNG0 422 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 TMEM217Q8N7C4 229 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 APH1BQ8WW43 257 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 C20orf85Q9H1P6 137 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms