RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 LRRC36Q1X8D7 754 aa9.72□□□□□ -0.85
HDAC4-216ENST00000544989 DEFB112Q30KQ8 113 aa9.72□□□□□ -0.85
HDAC4-216ENST00000544989 Q6YL49 198 aa9.72□□□□□ -0.85
HDAC4-216ENST00000544989 SLC25A26Q70HW3 274 aa9.72□□□□□ -0.85
HDAC4-216ENST00000544989 SERPINA12Q8IW75 414 aa9.72□□□□□ -0.85
HDAC4-216ENST00000544989 APH1BQ8WW43 257 aa9.72□□□□□ -0.85
HDAC4-216ENST00000544989 ADAT3Q96EY9 351 aaPredicted RBP9.72□□□□□ -0.85
HDAC4-216ENST00000544989 DPAGT1Q9H3H5 408 aa9.72□□□□□ -0.85
HDAC4-216ENST00000544989 DCLRE1BQ9H816 532 aa9.72□□□□□ -0.85
HDAC4-216ENST00000544989 AASSQ9UDR5 926 aa9.72□□□□□ -0.85
HDAC4-216ENST00000544989 DHDHQ9UQ10 334 aa9.72□□□□□ -0.85
HDAC4-216ENST00000544989 PCDHGB5Q9Y5G0 923 aa9.72□□□□□ -0.85
HDAC4-216ENST00000544989 TRBV2A0A0J9YWF9 115 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 H3BSH0 61 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 CASQ2O14958 399 aaPredicted RBP9.71□□□□□ -0.86
HDAC4-216ENST00000544989 WBP4O75554 376 aaKnown RBP9.71□□□□□ -0.86
HDAC4-216ENST00000544989 TK1P04183 234 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 CD2P06729 351 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 FBP1P09467 338 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 PEX2P28328 305 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 CAPGP40121 348 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 BMXP51813 675 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 UBE2E1P51965 193 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 ACSM1Q08AH1 577 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 SPIN3Q5JUX0 258 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 OGFRL1Q5TC84 451 aaPredicted RBP9.71□□□□□ -0.86
HDAC4-216ENST00000544989 RPL22L1Q6P5R6 122 aaKnown RBP9.71□□□□□ -0.86
HDAC4-216ENST00000544989 C16orf87Q6PH81 154 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 SAXO1Q8IYX7 474 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 C8orf59Q8N0T1 100 aaPredicted RBP9.71□□□□□ -0.86
HDAC4-216ENST00000544989 FAM185AQ8N0U4 392 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 PARP16Q8N5Y8 322 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 CD177Q8N6Q3 437 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 C3orf56Q8N813 242 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 ZSCAN4Q8NAM6 433 aaPredicted RBP9.71□□□□□ -0.86
HDAC4-216ENST00000544989 PPP1R35Q8TAP8 253 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 TSEN15Q8WW01 171 aaKnown RBP9.71□□□□□ -0.86
HDAC4-216ENST00000544989 EMG1Q92979 244 aaKnown RBP9.71□□□□□ -0.86
HDAC4-216ENST00000544989 ZNF488Q96MN9 340 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 ZNF649Q9BS31 505 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 ZCCHC4Q9H5U6 513 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 HEXA-AS1Q9H8Q6 139 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 MTCH1Q9NZJ7 389 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 OR14J1Q9UGF5 321 aa9.71□□□□□ -0.86
HDAC4-216ENST00000544989 DIMT1Q9UNQ2 313 aaKnown RBP9.71□□□□□ -0.86
HDAC4-216ENST00000544989 SF3B6Q9Y3B4 125 aaKnown RBP9.71□□□□□ -0.86
HDAC4-216ENST00000544989 IGKV1-27A0A075B6S5 117 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 A0A1B0GUS0 222 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 BTBD17A6NE02 478 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 EFCAB10A6NFE3 127 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 K7N7A8 449 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 MAGEB3O15480 346 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 HOXA3O43365 443 aaPredicted RBP9.7□□□□□ -0.86
HDAC4-216ENST00000544989 WIPF1O43516 503 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 SULT1B1O43704 296 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 ZFPL1O95159 310 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 RBP4P02753 201 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 CRYBA1P05813 215 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 LIMS3P0CW19 117 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 LIMS4P0CW20 117 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 PIPP12273 146 aaPredicted RBP9.7□□□□□ -0.86
HDAC4-216ENST00000544989 POU3F4P49335 361 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 ADARB1P78563 741 aaKnown RBP9.7□□□□□ -0.86
HDAC4-216ENST00000544989 GABPB1Q06547 395 aaPredicted RBP9.7□□□□□ -0.86
HDAC4-216ENST00000544989 PDZK1IP1Q13113 114 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 LDLRAD3Q86YD5 345 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 FAM58AQ8N1B3 248 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 FGFRL1Q8N441 504 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 ASCC1Q8N9N2 400 aaKnown RBP9.7□□□□□ -0.86
HDAC4-216ENST00000544989 OR52N1Q8NH53 320 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 CNIH3Q8TBE1 160 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 GPR148Q8TDV2 347 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 SLAMF9Q96A28 289 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 TMEM80Q96HE8 168 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 SNX22Q96L94 193 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 ISG20L2Q9H9L3 353 aaKnown RBP9.7□□□□□ -0.86
HDAC4-216ENST00000544989 SIRT7Q9NRC8 400 aa9.7□□□□□ -0.86
HDAC4-216ENST00000544989 CNOT2Q9NZN8 540 aaKnown RBP9.7□□□□□ -0.86
HDAC4-216ENST00000544989 IGKV1-9A0A0C4DH69 117 aa9.69□□□□□ -0.86
HDAC4-216ENST00000544989 FUOMA2VDF0 154 aa9.69□□□□□ -0.86
HDAC4-216ENST00000544989 POM121CA8CG34 1229 aa9.69□□□□□ -0.86
HDAC4-216ENST00000544989 SH2D1BO14796 132 aa9.69□□□□□ -0.86
HDAC4-216ENST00000544989 NPFFO15130 113 aa9.69□□□□□ -0.86
HDAC4-216ENST00000544989 PAHP00439 452 aa9.69□□□□□ -0.86
HDAC4-216ENST00000544989 MELTFP08582 738 aa9.69□□□□□ -0.86
HDAC4-216ENST00000544989 TAS2R43P59537 309 aa9.69□□□□□ -0.86
HDAC4-216ENST00000544989 ERVFRD-1P60508 538 aa9.69□□□□□ -0.86
HDAC4-216ENST00000544989 COL10A1Q03692 680 aa9.69□□□□□ -0.86
HDAC4-216ENST00000544989 MEF2CQ06413 473 aaPredicted RBP9.69□□□□□ -0.86
HDAC4-216ENST00000544989 ZNF146Q15072 292 aa9.69□□□□□ -0.86
HDAC4-216ENST00000544989 SMN1Q16637 294 aaKnown RBP9.69□□□□□ -0.86
HDAC4-216ENST00000544989 MIDNQ504T8 468 aa9.69□□□□□ -0.86
HDAC4-216ENST00000544989 RUSC1-AS1Q66K80 236 aa9.69□□□□□ -0.86
HDAC4-216ENST00000544989 GDPD3Q7L5L3 318 aa9.69□□□□□ -0.86
HDAC4-216ENST00000544989 OR8H2Q8N162 312 aa9.69□□□□□ -0.86
HDAC4-216ENST00000544989 Q8N7P7 452 aa9.69□□□□□ -0.86
HDAC4-216ENST00000544989 OR51A4Q8NGJ6 313 aa9.69□□□□□ -0.86
HDAC4-216ENST00000544989 OR13C9Q8NGT0 318 aa9.69□□□□□ -0.86
HDAC4-216ENST00000544989 TNFRSF14Q92956 283 aa9.69□□□□□ -0.86
HDAC4-216ENST00000544989 C1orf147Q96MC9 270 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms