RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 TNFAIP8O95379 198 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 CYB5AP00167 134 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 TMEM225BP0DP42 221 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 CALCBP10092 127 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 PSMB9P28065 219 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 GABRA5P31644 462 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 GABRA2P47869 451 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 OR3A4PP47883 348 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 FABP5Q01469 135 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 PAX2Q02962 417 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 TRAM1Q15629 374 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 C1QL2Q7Z5L3 287 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 SAXO1Q8IYX7 474 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 CD177Q8N6Q3 437 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 EMG1Q92979 244 aaKnown RBP12.54□□□□□ -0.4
CD9-210ENST00000543916 GPER1Q99527 375 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 DNTTIP1Q9H147 329 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 MMP26Q9NRE1 261 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 NDUFB11Q9NX14 153 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 METRNQ9UJH8 293 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 SIGLEC5O15389 551 aa12.53□□□□□ -0.4
CD9-210ENST00000543916 RGS9O75916 674 aaPredicted RBP12.53□□□□□ -0.4
CD9-210ENST00000543916 KDM4BO94953 1096 aa12.53□□□□□ -0.4
CD9-210ENST00000543916 KNG1P01042 644 aa12.53□□□□□ -0.4
CD9-210ENST00000543916 MAS1P04201 325 aa12.53□□□□□ -0.4
CD9-210ENST00000543916 SFTPBP07988 381 aa12.53□□□□□ -0.4
CD9-210ENST00000543916 UCHL1P09936 223 aa12.53□□□□□ -0.4
CD9-210ENST00000543916 ADRA2CP18825 462 aa12.53□□□□□ -0.4
CD9-210ENST00000543916 PSMA1P25786 263 aaKnown RBP12.53□□□□□ -0.4
CD9-210ENST00000543916 ZNF93P35789 620 aaPredicted RBP12.53□□□□□ -0.4
CD9-210ENST00000543916 NPY4RP50391 375 aa12.53□□□□□ -0.4
CD9-210ENST00000543916 IL13RA1P78552 427 aa12.53□□□□□ -0.4
CD9-210ENST00000543916 IKZF1Q13422 519 aa12.53□□□□□ -0.4
CD9-210ENST00000543916 DGUOKQ16854 277 aa12.53□□□□□ -0.4
CD9-210ENST00000543916 SLC36A1Q7Z2H8 476 aa12.53□□□□□ -0.4
CD9-210ENST00000543916 Q8IYB0 196 aa12.53□□□□□ -0.4
CD9-210ENST00000543916 ZSCAN4Q8NAM6 433 aaPredicted RBP12.53□□□□□ -0.4
CD9-210ENST00000543916 TNFAIP8L1Q8WVP5 186 aa12.53□□□□□ -0.4
CD9-210ENST00000543916 DACT3Q96B18 629 aaPredicted RBP12.53□□□□□ -0.4
CD9-210ENST00000543916 CPNE2Q96FN4 548 aaPredicted RBP12.53□□□□□ -0.4
CD9-210ENST00000543916 SDSLQ96GA7 329 aa12.53□□□□□ -0.4
CD9-210ENST00000543916 ZNF696Q9H7X3 374 aa12.53□□□□□ -0.4
CD9-210ENST00000543916 OR14J1Q9UGF5 321 aa12.53□□□□□ -0.4
CD9-210ENST00000543916 OR5V1Q9UGF6 321 aa12.53□□□□□ -0.4
CD9-210ENST00000543916 MAB21L2Q9Y586 359 aa12.53□□□□□ -0.4
CD9-210ENST00000543916 TLN2Q9Y4G6 2542 aa12.53□□□□□ -0.4
CD9-210ENST00000543916 C22orf46C9J442 243 aa12.52□□□□□ -0.41
CD9-210ENST00000543916 PRKACAP17612 351 aa12.52□□□□□ -0.41
CD9-210ENST00000543916 PRDX2P32119 198 aa12.52□□□□□ -0.41
CD9-210ENST00000543916 SNU13P55769 128 aaKnown RBP12.52□□□□□ -0.41
CD9-210ENST00000543916 NEDD8Q15843 81 aa12.52□□□□□ -0.41
CD9-210ENST00000543916 CR1LQ2VPA4 569 aa12.52□□□□□ -0.41
CD9-210ENST00000543916 HSD17B12Q53GQ0 312 aa12.52□□□□□ -0.41
CD9-210ENST00000543916 DCAF12L2Q5VW00 463 aa12.52□□□□□ -0.41
CD9-210ENST00000543916 IL17RELQ6ZVW7 336 aa12.52□□□□□ -0.41
CD9-210ENST00000543916 LRRTM1Q86UE6 522 aa12.52□□□□□ -0.41
CD9-210ENST00000543916 LYPD6Q86Y78 171 aa12.52□□□□□ -0.41
CD9-210ENST00000543916 FAM58AQ8N1B3 248 aa12.52□□□□□ -0.41
CD9-210ENST00000543916 ZNRF1Q8ND25 227 aa12.52□□□□□ -0.41
CD9-210ENST00000543916 PXT1Q8NFP0 134 aa12.52□□□□□ -0.41
CD9-210ENST00000543916 TSPAN14Q8NG11 270 aa12.52□□□□□ -0.41
CD9-210ENST00000543916 ST8SIA4Q92187 359 aa12.52□□□□□ -0.41
CD9-210ENST00000543916 MED30Q96HR3 178 aa12.52□□□□□ -0.41
CD9-210ENST00000543916 FAM192AQ9GZU8 254 aa12.52□□□□□ -0.41
CD9-210ENST00000543916 HMG20AQ9NP66 347 aa12.52□□□□□ -0.41
CD9-210ENST00000543916 TMEM160Q9NX00 188 aa12.52□□□□□ -0.41
CD9-210ENST00000543916 CSPG4Q6UVK1 2322 aa12.52□□□□□ -0.41
CD9-210ENST00000543916 LOC105371242A0A075B767 164 aa12.51□□□□□ -0.41
CD9-210ENST00000543916 PPIAL4CA0A0B4J2A2 164 aa12.51□□□□□ -0.41
CD9-210ENST00000543916 IGHV2-70DA0A0C4DH43 119 aa12.51□□□□□ -0.41
CD9-210ENST00000543916 A0A0G2JMP0 313 aa12.51□□□□□ -0.41
CD9-210ENST00000543916 A0A0X1KG70 313 aa12.51□□□□□ -0.41
CD9-210ENST00000543916 CCRL2O00421 344 aa12.51□□□□□ -0.41
CD9-210ENST00000543916 NDUFB3O43676 98 aa12.51□□□□□ -0.41
CD9-210ENST00000543916 DUSP1P28562 367 aa12.51□□□□□ -0.41
CD9-210ENST00000543916 PTGFRP43088 359 aa12.51□□□□□ -0.41
CD9-210ENST00000543916 FAM120AOSQ5T036 256 aa12.51□□□□□ -0.41
CD9-210ENST00000543916 SYT6Q5T7P8 510 aaPredicted RBP12.51□□□□□ -0.41
CD9-210ENST00000543916 CD200R1LQ6Q8B3 271 aa12.51□□□□□ -0.41
CD9-210ENST00000543916 ASCL4Q6XD76 172 aa12.51□□□□□ -0.41
CD9-210ENST00000543916 JAGN1Q8N5M9 183 aa12.51□□□□□ -0.41
CD9-210ENST00000543916 OR4M2Q8NGB6 313 aa12.51□□□□□ -0.41
CD9-210ENST00000543916 OR10K1Q8NGX5 313 aa12.51□□□□□ -0.41
CD9-210ENST00000543916 PHYHIPQ92561 330 aa12.51□□□□□ -0.41
CD9-210ENST00000543916 MUL1Q969V5 352 aa12.51□□□□□ -0.41
CD9-210ENST00000543916 TMPRSS13Q9BYE2 586 aa12.51□□□□□ -0.41
CD9-210ENST00000543916 ELL3Q9HB65 397 aaPredicted RBP12.51□□□□□ -0.41
CD9-210ENST00000543916 TCF7L1Q9HCS4 588 aa12.51□□□□□ -0.41
CD9-210ENST00000543916 INSIG2Q9Y5U4 225 aa12.51□□□□□ -0.41
CD9-210ENST00000543916 DOCK11Q5JSL3 2073 aa12.5□□□□□ -0.41
CD9-210ENST00000543916 NF1P21359 2839 aa12.5□□□□□ -0.41
CD9-210ENST00000543916 A0A087WXM4 84 aa12.5□□□□□ -0.41
CD9-210ENST00000543916 CDRT1O95170 752 aa12.5□□□□□ -0.41
CD9-210ENST00000543916 AVPP01185 164 aa12.5□□□□□ -0.41
CD9-210ENST00000543916 SRMP19623 302 aa12.5□□□□□ -0.41
CD9-210ENST00000543916 ZNF146Q15072 292 aa12.5□□□□□ -0.41
CD9-210ENST00000543916 LRRC10Q5BKY1 277 aa12.5□□□□□ -0.41
CD9-210ENST00000543916 FAHD2BQ6P2I3 314 aaPredicted RBP12.5□□□□□ -0.41
CD9-210ENST00000543916 C1orf229Q6ZS94 237 aaPredicted RBP12.5□□□□□ -0.41
CD9-210ENST00000543916 BTN2A1Q7KYR7 527 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms