RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 APH1BQ8WW43 257 aa10.68□□□□□ -0.7
TNFRSF1A-215ENST00000543359 PP6455Q8WZ26 134 aa10.68□□□□□ -0.7
TNFRSF1A-215ENST00000543359 SLAMF9Q96A28 289 aa10.68□□□□□ -0.7
TNFRSF1A-215ENST00000543359 FGGYQ96C11 551 aa10.68□□□□□ -0.7
TNFRSF1A-215ENST00000543359 CEP19Q96LK0 163 aa10.68□□□□□ -0.7
TNFRSF1A-215ENST00000543359 C9orf16Q9BUW7 83 aa10.68□□□□□ -0.7
TNFRSF1A-215ENST00000543359 ADI1Q9BV57 179 aa10.68□□□□□ -0.7
TNFRSF1A-215ENST00000543359 PLEKHA1Q9HB21 404 aa10.68□□□□□ -0.7
TNFRSF1A-215ENST00000543359 BEX1Q9HBH7 125 aa10.68□□□□□ -0.7
TNFRSF1A-215ENST00000543359 MRPS18AQ9NVS2 196 aaKnown RBP10.68□□□□□ -0.7
TNFRSF1A-215ENST00000543359 IL36RNQ9UBH0 155 aa10.68□□□□□ -0.7
TNFRSF1A-215ENST00000543359 OR14J1Q9UGF5 321 aa10.68□□□□□ -0.7
TNFRSF1A-215ENST00000543359 MYRFQ9Y2G1 1151 aa10.68□□□□□ -0.7
TNFRSF1A-215ENST00000543359 SF3B6Q9Y3B4 125 aaKnown RBP10.68□□□□□ -0.7
TNFRSF1A-215ENST00000543359 GMPPBQ9Y5P6 360 aa10.68□□□□□ -0.7
TNFRSF1A-215ENST00000543359 LOC100130705A0A1B0GUX0 176 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 C17orf98A8MV24 154 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 H0YAE9 185 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 SERPINA3P01011 423 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 IGHA1P01876 353 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 DBTP11182 482 aaKnown RBP10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 CCL3L1P16619 93 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 NPBWR2P48146 333 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 COL10A1Q03692 680 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 BLMHQ13867 455 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 MIDNQ504T8 468 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 GDPGP1Q6ZNW5 385 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 C17orf107Q6ZR85 190 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 ZBTB49Q6ZSB9 765 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 Q6ZSV7 163 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 LHFPL3Q86UP9 236 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 EGFL6Q8IUX8 553 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 C4orf36Q96KX1 117 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 CITED1Q99966 193 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 MEGF9Q9H1U4 602 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 DPAGT1Q9H3H5 408 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 ISG20L2Q9H9L3 353 aaKnown RBP10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 AMBNQ9NP70 447 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 FAM118AQ9NWS6 357 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 VPREB3Q9UKI3 123 aa10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 CAB39Q9Y376 341 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF1A-215ENST00000543359 E9PI62 339 aa10.66□□□□□ -0.7
TNFRSF1A-215ENST00000543359 J3QLW9 94 aa10.66□□□□□ -0.7
TNFRSF1A-215ENST00000543359 EBAG9O00559 213 aa10.66□□□□□ -0.7
TNFRSF1A-215ENST00000543359 CRYBA1P05813 215 aa10.66□□□□□ -0.7
TNFRSF1A-215ENST00000543359 HTR1AP08908 422 aa10.66□□□□□ -0.7
TNFRSF1A-215ENST00000543359 ZNF19P17023 458 aa10.66□□□□□ -0.7
TNFRSF1A-215ENST00000543359 ATF1P18846 271 aa10.66□□□□□ -0.7
TNFRSF1A-215ENST00000543359 RBP2P50120 134 aa10.66□□□□□ -0.7
TNFRSF1A-215ENST00000543359 PROK1P58294 105 aa10.66□□□□□ -0.7
TNFRSF1A-215ENST00000543359 GALEQ14376 348 aa10.66□□□□□ -0.7
TNFRSF1A-215ENST00000543359 TCF23Q7RTU1 214 aa10.66□□□□□ -0.7
TNFRSF1A-215ENST00000543359 OR52N4Q8NGI2 321 aa10.66□□□□□ -0.7
TNFRSF1A-215ENST00000543359 PIFOQ8TCI5 191 aa10.66□□□□□ -0.7
TNFRSF1A-215ENST00000543359 BORCS8Q96FH0 119 aa10.66□□□□□ -0.7
TNFRSF1A-215ENST00000543359 ALG8Q9BVK2 526 aa10.66□□□□□ -0.7
TNFRSF1A-215ENST00000543359 C16orf95Q9H693 158 aa10.66□□□□□ -0.7
TNFRSF1A-215ENST00000543359 IGKV1-12A0A0C4DH73 117 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 FAM90A8PA6NJQ4 464 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 SNTNA6NMZ2 147 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 ANGPTL7O43827 346 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 MPZL2O60487 215 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 WBP4O75554 376 aaKnown RBP10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 TSPAN9O75954 239 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 CLPXO76031 633 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 INMTO95050 263 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 IGKV1D-12P01611 117 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 MT-ND2P03891 347 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 CHRM2P08172 466 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 BCL3P20749 454 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 AZGP1P25311 298 aaKnown RBP10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 PAX6P26367 422 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 ATP1B3P54709 279 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 MTCP1P56278 107 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 ACTA2P62736 377 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 ACTG2P63267 376 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 PDZK1IP1Q13113 114 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 ALKBH1Q13686 389 aaKnown RBP10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 ZNF146Q15072 292 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 CNN3Q15417 329 aaKnown RBP10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 LDLRAD2Q5SZI1 272 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 SYS1Q8N2H4 156 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 OR52I1Q8NGK6 324 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 OR5R1Q8NH85 324 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 Q96MT0 163 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 RBFOX1Q9NWB1 397 aaKnown RBP10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 ERVK13-1Q9NX77 482 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 HHLA2Q9UM44 414 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 DNAH3Q8TD57 4116 aa10.65□□□□□ -0.7
TNFRSF1A-215ENST00000543359 TRBV2A0A0J9YWF9 115 aa10.64□□□□□ -0.71
TNFRSF1A-215ENST00000543359 PSPNO60542 156 aa10.64□□□□□ -0.71
TNFRSF1A-215ENST00000543359 ZFPL1O95159 310 aa10.64□□□□□ -0.71
TNFRSF1A-215ENST00000543359 LIMS3P0CW19 117 aa10.64□□□□□ -0.71
TNFRSF1A-215ENST00000543359 LIMS4P0CW20 117 aa10.64□□□□□ -0.71
TNFRSF1A-215ENST00000543359 ZNF728P0DKX0 622 aa10.64□□□□□ -0.71
TNFRSF1A-215ENST00000543359 PIPP12273 146 aaPredicted RBP10.64□□□□□ -0.71
TNFRSF1A-215ENST00000543359 PRKACBP22694 351 aa10.64□□□□□ -0.71
TNFRSF1A-215ENST00000543359 BMXP51813 675 aa10.64□□□□□ -0.71
TNFRSF1A-215ENST00000543359 RAB40BQ12829 278 aa10.64□□□□□ -0.71
TNFRSF1A-215ENST00000543359 AANATQ16613 207 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms