RNA–Protein interactions for RNA: ENST00000543120.5

PTPN6-221, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 4

Gene PTPN6, Length 564 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-221	ENST00000543120	TBC1D15	Q8TC07	691 aa		13.55	□□□□□ -0.24
PTPN6-221	ENST00000543120	PP6455	Q8WZ26	134 aa		13.55	□□□□□ -0.24
PTPN6-221	ENST00000543120	BORCS8	Q96FH0	119 aa		13.55	□□□□□ -0.24
PTPN6-221	ENST00000543120		Q96MT0	163 aa		13.55	□□□□□ -0.24
PTPN6-221	ENST00000543120	MRPS18A	Q9NVS2	196 aa	Known RBP	13.55	□□□□□ -0.24
PTPN6-221	ENST00000543120	RBFOX1	Q9NWB1	397 aa	Known RBP	13.55	□□□□□ -0.24
PTPN6-221	ENST00000543120	MEX3A	A1L020	520 aa	Known RBP	13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	MEIOC	A2RUB1	952 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	POM121C	A8CG34	1229 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	GPR137B	O60478	399 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	CLIC3	O95833	236 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	BCL3	P20749	454 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	AZGP1	P25311	298 aa	Known RBP	13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	PAX6	P26367	422 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	DUSP1	P28562	367 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	RBP2	P50120	134 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	ATP1B3	P54709	279 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	DLX6	P56179	175 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	ACTA2	P62736	377 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	ACTG2	P63267	376 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	RAB40B	Q12829	278 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	BLMH	Q13867	455 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	LRRC36	Q1X8D7	754 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	LPCAT4	Q643R3	524 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	NCR3LG1	Q68D85	454 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	SHISA2	Q6UWI4	295 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	DNAAF1	Q8NEP3	725 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	FAM234A	Q9H0X4	552 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	ZNRD1	Q9P1U0	126 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	HHLA2	Q9UM44	414 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	MMP24	Q9Y5R2	645 aa		13.54	□□□□□ -0.24
PTPN6-221	ENST00000543120	IGKV1-12	A0A0C4DH73	117 aa		13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	SPRY1	O43609	319 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	ANGPTL7	O43827	346 aa		13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	ZFPL1	O95159	310 aa		13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	FADS2	O95864	444 aa	Known RBP	13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	IGKV1D-12	P01611	117 aa		13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	CRYBA1	P05813	215 aa		13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	CHRM2	P08172	466 aa		13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	PIP	P12273	146 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	ZNF20	P17024	532 aa		13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	GTF2A1	P52655	376 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	RAG2	P55895	527 aa		13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	PDZK1IP1	Q13113	114 aa		13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	CNN3	Q15417	329 aa	Known RBP	13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	C17orf107	Q6ZR85	190 aa		13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	SYS1	Q8N2H4	156 aa		13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	ZNF676	Q8N7Q3	588 aa		13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	OR5D13	Q8NGL4	314 aa		13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	OR13C3	Q8NGS6	347 aa		13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	SGMS2	Q8NHU3	365 aa		13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	DYRK2	Q92630	601 aa		13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	RFT1	Q96AA3	541 aa		13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	SPACA5	Q96QH8	159 aa		13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	SMPD3	Q9NY59	655 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	SF3B6	Q9Y3B4	125 aa	Known RBP	13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	RPL36	Q9Y3U8	105 aa	Known RBP	13.53	□□□□□ -0.24
PTPN6-221	ENST00000543120	TRRAP	Q9Y4A5	3859 aa		13.52	□□□□□ -0.24
PTPN6-221	ENST00000543120	NDUFA7	O95182	113 aa		13.52	□□□□□ -0.25
PTPN6-221	ENST00000543120	FBP1	P09467	338 aa		13.52	□□□□□ -0.25
PTPN6-221	ENST00000543120	LIMS3	P0CW19	117 aa		13.52	□□□□□ -0.25
PTPN6-221	ENST00000543120	LIMS4	P0CW20	117 aa		13.52	□□□□□ -0.25
PTPN6-221	ENST00000543120	PRKACB	P22694	351 aa		13.52	□□□□□ -0.25
PTPN6-221	ENST00000543120	POU3F4	P49335	361 aa		13.52	□□□□□ -0.25
PTPN6-221	ENST00000543120	KRTAP10-3	P60369	221 aa		13.52	□□□□□ -0.25
PTPN6-221	ENST00000543120	ACSM1	Q08AH1	577 aa		13.52	□□□□□ -0.25
PTPN6-221	ENST00000543120	ASCC1	Q8N9N2	400 aa	Known RBP	13.52	□□□□□ -0.25
PTPN6-221	ENST00000543120	OR52N4	Q8NGI2	321 aa		13.52	□□□□□ -0.25
PTPN6-221	ENST00000543120	CNIH3	Q8TBE1	160 aa		13.52	□□□□□ -0.25
PTPN6-221	ENST00000543120	EMG1	Q92979	244 aa	Known RBP	13.52	□□□□□ -0.25
PTPN6-221	ENST00000543120	PDCD1LG2	Q9BQ51	273 aa		13.52	□□□□□ -0.25
PTPN6-221	ENST00000543120	DPAGT1	Q9H3H5	408 aa		13.52	□□□□□ -0.25
PTPN6-221	ENST00000543120	INPP5E	Q9NRR6	644 aa		13.52	□□□□□ -0.25
PTPN6-221	ENST00000543120	PSPN	O60542	156 aa		13.51	□□□□□ -0.25
PTPN6-221	ENST00000543120	HAND1	O96004	215 aa		13.51	□□□□□ -0.25
PTPN6-221	ENST00000543120	ETV1	P50549	477 aa		13.51	□□□□□ -0.25
PTPN6-221	ENST00000543120	SNU13	P55769	128 aa	Known RBP	13.51	□□□□□ -0.25
PTPN6-221	ENST00000543120	ZSCAN26	Q16670	478 aa		13.51	□□□□□ -0.25
PTPN6-221	ENST00000543120	XAF1	Q6GPH4	301 aa		13.51	□□□□□ -0.25
PTPN6-221	ENST00000543120	TCF23	Q7RTU1	214 aa		13.51	□□□□□ -0.25
PTPN6-221	ENST00000543120	FAM58A	Q8N1B3	248 aa		13.51	□□□□□ -0.25
PTPN6-221	ENST00000543120	ZNF555	Q8NEP9	628 aa		13.51	□□□□□ -0.25
PTPN6-221	ENST00000543120	OR13C9	Q8NGT0	318 aa		13.51	□□□□□ -0.25
PTPN6-221	ENST00000543120	STMN2	Q93045	179 aa		13.51	□□□□□ -0.25
PTPN6-221	ENST00000543120	SPSB1	Q96BD6	273 aa		13.51	□□□□□ -0.25
PTPN6-221	ENST00000543120	SNX22	Q96L94	193 aa		13.51	□□□□□ -0.25
PTPN6-221	ENST00000543120	OPALIN	Q96PE5	141 aa		13.51	□□□□□ -0.25
PTPN6-221	ENST00000543120	ZCCHC4	Q9H5U6	513 aa		13.51	□□□□□ -0.25
PTPN6-221	ENST00000543120	SEBOX	Q9HB31	216 aa	Predicted RBP	13.51	□□□□□ -0.25
PTPN6-221	ENST00000543120	FGF20	Q9NP95	211 aa	Predicted RBP	13.51	□□□□□ -0.25
PTPN6-221	ENST00000543120	CAB39	Q9Y376	341 aa	Predicted RBP	13.51	□□□□□ -0.25
PTPN6-221	ENST00000543120	TRBV2	A0A0J9YWF9	115 aa		13.5	□□□□□ -0.25
PTPN6-221	ENST00000543120	C17orf98	A8MV24	154 aa		13.5	□□□□□ -0.25
PTPN6-221	ENST00000543120	ANKRD65	E5RJM6	399 aa		13.5	□□□□□ -0.25
PTPN6-221	ENST00000543120	MT-ND2	P03891	347 aa		13.5	□□□□□ -0.25
PTPN6-221	ENST00000543120	COX7A1	P24310	79 aa		13.5	□□□□□ -0.25
PTPN6-221	ENST00000543120	BMX	P51813	675 aa		13.5	□□□□□ -0.25
PTPN6-221	ENST00000543120	EDDM3B	P56851	147 aa		13.5	□□□□□ -0.25
PTPN6-221	ENST00000543120	MIDN	Q504T8	468 aa		13.5	□□□□□ -0.25
PTPN6-221	ENST00000543120	KLHL22	Q53GT1	634 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms