RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 TNRC6BQ9UPQ9 1833 aaKnown RBP4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 IGKV1-27A0A075B6S5 117 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 A0A0J9YW62 118 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 OR6C6A6NF89 314 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF891A8MT65 544 aaPredicted RBP4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 NPIPA2E9PIF3 369 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 F8W036 122 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 NPIPA3F8WFD2 350 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 LRP3O75074 770 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 KLF7O75840 302 aaPredicted RBP4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 SERPINA5P05154 406 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 CELA2AP08217 269 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 DBHP09172 617 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 CST2P09228 141 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 MUC1P15941 1255 aaPredicted RBP4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 ACKR3P25106 362 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 PAX6P26367 422 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 CHATP28329 748 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 HOXC12P31275 282 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 RBMXP38159 391 aaKnown RBP4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 CXCL12P48061 93 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 UCP2P55851 309 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 B3GALT5-AS1P59052 145 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 RAC1P63000 192 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 BLOC1S1P78537 153 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM3AP98173 230 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 HGFACQ04756 655 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 RAB35Q15286 201 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 EXT1Q16394 746 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 IAH1Q2TAA2 248 aaPredicted RBP4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 DMRTC1Q5HYR2 192 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 OR2A2Q6IF42 318 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 H3F3CQ6NXT2 135 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 PLXDC2Q6UX71 529 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 RAB11FIP2Q7L804 512 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 TMEM200AQ86VY9 491 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 SGPP2Q8IWX5 399 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF100Q8IYN0 542 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 MAML2Q8IZL2 1156 aaPredicted RBP4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 GPR137CQ8N3F9 429 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 PIGTQ969N2 578 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 GNRHR2Q96P88 292 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 MICU1Q9BPX6 476 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF2Q9BSG1 426 aaPredicted RBP4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 HDHD3Q9BSH5 251 aaPredicted RBP4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 ADAT1Q9BUB4 502 aaKnown RBP4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 METTL9Q9H1A3 318 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 TAF9BQ9HBM6 251 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 PLEKHJ1Q9NW61 149 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 IL36GQ9NZH8 169 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 AK3Q9UIJ7 227 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF175Q9Y473 711 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 MYO15AQ9UKN7 3530 aa4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 ZFHX2Q9C0A1 2572 aaPredicted RBP4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 IGHV3-15A0A0B4J1V0 119 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 RNASEK-C17orf49H0YIS7 233 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 H7C1Q1 480 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 H7C2Y5 167 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 K7EPK0 472 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 JTBO76095 146 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 KNG1P01042 644 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 SFTPBP07988 381 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 OR5H8P0DN80 308 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 RCC1P18754 421 aaPredicted RBP4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 LMO1P25800 156 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 RPL12P30050 165 aaKnown RBP4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 FCGR2CP31995 323 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 RFC3P40938 356 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 PMELP40967 661 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 NPBWR1P48145 328 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 HOXA1P49639 335 aaPredicted RBP4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 SSR4P51571 173 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 UCP3P55916 312 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 MTCP1P56278 107 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 TMEM33P57088 247 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 MLF1P58340 268 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 RAC3P60763 192 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 S100A10P60903 97 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 TMEM187Q14656 261 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF528Q3MIS6 628 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 GGNBP1Q5YKI7 109 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 TMEM88Q6PEY1 159 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 HAGHLQ6PII5 290 aaPredicted RBP4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 GALNTL5Q7Z4T8 443 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 CBLN2Q8IUK8 224 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 LRRC18Q8N456 261 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM71E2Q8N5Q1 922 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 UBAC2Q8NBM4 344 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 OR1F12Q8NHA8 337 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 FNDC9Q8TBE3 224 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 CPT1CQ8TCG5 803 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 NAT6Q93015 286 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 MRPL24Q96A35 216 aaKnown RBP4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 CPNE2Q96FN4 548 aaPredicted RBP4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 REEP6Q96HR9 211 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 C18orf12Q96KH6 178 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 CCDC140Q96MF4 163 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 S100A13Q99584 98 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 FAAP24Q9BTP7 215 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 SCRT1Q9BWW7 348 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms