RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 EMBQ6PCB8 327 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 WDR88Q6ZMY6 472 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 CFAP77Q6ZQR2 320 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 RBPMS2Q6ZRY4 209 aaKnown RBP1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 SLC16A9Q7RTY1 509 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 COMMD6Q7Z4G1 85 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 TMEM61Q8N0U2 210 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 C4orf33Q8N1A6 199 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 METTL4Q8N3J2 472 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 ARFGAP2Q8N6H7 521 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 ZNF676Q8N7Q3 588 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 Q8N814 137 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 Q8N9W7 124 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 SMYD1Q8NB12 490 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 BBS1Q8NFJ9 593 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 OR56B4Q8NH76 319 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 OR6X1Q8NH79 312 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 ANGPTL6Q8NI99 470 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 TRMT10AQ8TBZ6 339 aaKnown RBP1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 CD300LFQ8TDQ1 290 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 SECTM1Q8WVN6 248 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 SPRYD4Q8WW59 207 aaPredicted RBP1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 TMEM54Q969K7 222 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 RPEQ96AT9 228 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 URB1-AS1Q96HZ7 61 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 EGLN2Q96KS0 407 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 OR52E6Q96RD3 313 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 HSPB9Q9BQS6 159 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 FUZQ9BT04 418 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 UPK3BQ9BT76 320 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 ADAT1Q9BUB4 502 aaKnown RBP1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 OSBPL8Q9BZF1 889 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 OR2H1Q9GZK4 316 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 IL22Q9GZX6 179 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 TMEM133Q9H2Q1 129 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 PIGUQ9H490 435 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 WDR55Q9H6Y2 383 aaPredicted RBP1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 GORASP2Q9H8Y8 452 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 SLCO1B3Q9NPD5 702 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 PTTG3PQ9NZH4 202 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 UBQLN2Q9UHD9 624 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 ZNF107Q9UII5 783 aaPredicted RBP1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 PRDM4Q9UKN5 801 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 SAMD4AQ9UPU9 718 aaKnown RBP1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 SLC35A3Q9Y2D2 325 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 PPP2R2CQ9Y2T4 447 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 PAM16Q9Y3D7 125 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 SESN1Q9Y6P5 492 aa1.39□□□□□ -2.19
TRAV1-1-201ENST00000542354 IGLV5-37A0A075B6J1 123 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 TRAV9-2A0A087WT02 112 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 A0A096LPI6 279 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 TEX48A0A1B0GUV7 120 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 A0A1W2PN81 502 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 A0A1W2PRG6 482 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 OR2AT4A6NND4 320 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 C15orf61A6NNL5 157 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 ZNF705EA8MWA4 302 aaPredicted RBP1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 TMEM233B4DJY2 109 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 BUB1B-PAK6H3BSN5 160 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 J3QR06 171 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 APOC4-APOC2K7ER74 178 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 UBXN8O00124 270 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 MFNGO00587 321 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 PSCAO43653 123 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 OR2T1O43869 369 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 APOC2P02655 101 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 MBPP02686 304 aaPredicted RBP1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 IL3P08700 152 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 TROVE2P10155 538 aaKnown RBP eCLIP1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 COX5BP10606 129 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 NQO1P15559 274 aaKnown RBP1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 CTNNA1P35221 906 aaKnown RBP1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 CHRNA7P36544 502 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 PGM1P36871 562 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 CDKN2BP42772 138 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 CMC4P56277 68 aaPredicted RBP1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 TPPP2P59282 170 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 EIF3EP60228 445 aaKnown RBP1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 GMFBP60983 142 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 ERVK-25P63136 954 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 TMEM267Q0VDI3 215 aaPredicted RBP1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 PLA2G7Q13093 441 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 ZNF141Q15928 474 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 SGCAQ16586 387 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 KRTAP19-6Q3LI70 58 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 TMEM41BQ5BJD5 291 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 FFAR4Q5NUL3 377 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 DCST2Q5T1A1 773 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 FAM162BQ5T6X4 162 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 LRRC38Q5VT99 294 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 AP1ARQ63HQ0 302 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 OR52W1Q6IF63 320 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 FAM122CQ6P4D5 195 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 SLC35D2Q76EJ3 337 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 DPY19L4Q7Z388 723 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 SZRD1Q7Z422 152 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 NET1Q7Z628 596 aaPredicted RBP1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 C1orf158Q8N1D5 194 aa1.38□□□□□ -2.19
TRAV1-1-201ENST00000542354 OR8H1Q8NGG4 311 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms