RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 SUSD2Q9UGT4 822 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 PADI1Q9ULC6 663 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 KCNIP3Q9Y2W7 256 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 TMED3Q9Y3Q3 217 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 ASCC3Q8N3C0 2202 aaKnown RBP12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 TLCD2A6NGC4 264 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 TCAPO15273 167 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 PTBP3O95758 552 aaKnown RBP12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 IGHMP01871 453 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 JMJD7P0C870 316 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 OR5H8P0DN80 308 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 PGCP20142 388 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 OMGP23515 440 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 CHAF1BQ13112 559 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 OR8G1Q15617 311 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 DEGS2Q6QHC5 323 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 ZNF248Q8NDW4 579 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 OR2G3Q8NGZ4 309 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 KCNK17Q96T54 332 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 PHF7Q9BWX1 381 aaPredicted RBP12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 BCO1Q9HAY6 547 aa12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 ELL3Q9HB65 397 aaPredicted RBP12.99□□□□□ -0.33
AC005840.4-201ENST00000541242 NSG1A0A0A6YYJ2 146 aa12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 LILRA5A6NI73 299 aa12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 MSTNO14793 375 aa12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 PGA4P0DJD7 388 aa12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 PGA5P0DJD9 388 aa12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 CDAP32320 146 aa12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 POLR2HP52434 150 aaKnown RBP12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 RRADP55042 308 aa12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 PHLDA2Q53GA4 152 aa12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 HIST1H2BLQ99880 126 aa12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 SLC25A31Q9H0C2 315 aa12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 B3GALT1Q9Y5Z6 326 aa12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 E9PLN8 166 aa12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 GEMIN2O14893 280 aaKnown RBP12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 GABRR1P24046 479 aa12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 FXYD4P59646 89 aa12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 C21orf62-AS1Q17RA5 79 aa12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 RSPO4Q2I0M5 234 aaPredicted RBP12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 AKR1C8PQ5T2L2 129 aa12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 OGFOD3Q6PK18 319 aa12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 CPEB2Q7Z5Q1 589 aaKnown RBP12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 C17orf82Q86X59 251 aaPredicted RBP12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 LFNGQ8NES3 379 aa12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 NEU1Q99519 415 aa12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 C2orf88Q9BSF0 95 aa12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 ZNF581Q9P0T4 197 aa12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 FOXD3Q9UJU5 478 aaPredicted RBP12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 WDFY3Q8IZQ1 3526 aa12.98□□□□□ -0.33
AC005840.4-201ENST00000541242 FAM24AA6NFZ4 105 aa12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 STMND1H3BQB6 276 aa12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 IFNA10P01566 189 aa12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 CTSDP07339 412 aaPredicted RBP12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 SFTPCP11686 197 aa12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 ATP6V0CP27449 155 aa12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 APLNRP35414 380 aa12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 ZNF121P58317 390 aaPredicted RBP12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 SMAD4Q13485 552 aaKnown RBP12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 FBXW12Q6X9E4 464 aa12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 DPPA2Q7Z7J5 298 aa12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 ADIPOR1Q96A54 375 aa12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 AK3Q9UIJ7 227 aa12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 NXT1Q9UKK6 140 aaKnown RBP12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 COL6A3P12111 3177 aa12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 ELOA3CA0A087WX78 387 aaPredicted RBP12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 FTCDNL1E5RQL4 147 aa12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 SLC33A1O00400 549 aaPredicted RBP12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 TMEM225BP0DP42 221 aa12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 OPRM1P35372 400 aa12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 OR1D4P47884 311 aa12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 ICAM4Q14773 271 aa12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 DNM1P34Q6PK57 102 aa12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 CRIP3Q6Q6R5 217 aa12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 OR5L1Q8NGL2 311 aa12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 DUSP15Q9H1R2 295 aaPredicted RBP12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 UNKLQ9H9P5 680 aaKnown RBP12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 POLR1DQ9Y2S0 133 aa12.97□□□□□ -0.33
AC005840.4-201ENST00000541242 UNC13CQ8NB66 2214 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 A0A1B0GW64 132 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 SMCO3A2RU48 225 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 SHISA8B8ZZ34 492 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 DBHP09172 617 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 G0S2P27469 103 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 GLIPR1P48060 266 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 CSNK1A1P48729 337 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 BIDP55957 195 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 HSD17B7P56937 341 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 MFAP5Q13361 173 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 TMEM187Q14656 261 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 HIST2H3PS2Q5TEC6 136 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 FAM57BQ71RH2 274 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 C5orf24Q7Z6I8 188 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 ZNF664Q8N3J9 261 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 FAM89BQ8N5H3 189 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 SUMF1Q8NBK3 374 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 NAXEQ8NCW5 288 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 TVP23CQ96ET8 276 aa12.96□□□□□ -0.33
AC005840.4-201ENST00000541242 CDX2Q99626 313 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms