RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, human

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-208	ENST00000540700	PPIAL4A	Q9Y536	164 aa		13.94	□□□□□ -0.18
UBC-208	ENST00000540700	MEGF8	Q7Z7M0	2845 aa		13.94	□□□□□ -0.18
UBC-208	ENST00000540700		A0A0G2JK05	382 aa		13.93	□□□□□ -0.18
UBC-208	ENST00000540700	SMIM30	A4D0T7	59 aa		13.93	□□□□□ -0.18
UBC-208	ENST00000540700	OOEP	A6NGQ2	149 aa		13.93	□□□□□ -0.18
UBC-208	ENST00000540700	LGALS8	O00214	317 aa		13.93	□□□□□ -0.18
UBC-208	ENST00000540700	ARL6IP5	O75915	188 aa		13.93	□□□□□ -0.18
UBC-208	ENST00000540700	SLC25A16	P16260	332 aa		13.93	□□□□□ -0.18
UBC-208	ENST00000540700	ZNF404	Q494X3	552 aa		13.93	□□□□□ -0.18
UBC-208	ENST00000540700	LYPD2	Q6UXB3	125 aa		13.93	□□□□□ -0.18
UBC-208	ENST00000540700	ACP7	Q6ZNF0	438 aa		13.93	□□□□□ -0.18
UBC-208	ENST00000540700	C1orf87	Q8N0U7	546 aa		13.93	□□□□□ -0.18
UBC-208	ENST00000540700	OR5T2	Q8NGG2	359 aa		13.93	□□□□□ -0.18
UBC-208	ENST00000540700	OR10K1	Q8NGX5	313 aa		13.93	□□□□□ -0.18
UBC-208	ENST00000540700	CLDND2	Q8NHS1	167 aa		13.93	□□□□□ -0.18
UBC-208	ENST00000540700	ZNF671	Q8TAW3	534 aa		13.93	□□□□□ -0.18
UBC-208	ENST00000540700	TNFAIP8L1	Q8WVP5	186 aa		13.93	□□□□□ -0.18
UBC-208	ENST00000540700	C1orf147	Q96MC9	270 aa	Predicted RBP	13.93	□□□□□ -0.18
UBC-208	ENST00000540700	SSR3	Q9UNL2	185 aa		13.93	□□□□□ -0.18
UBC-208	ENST00000540700	TRAV1-2	A0A0B4J238	106 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700		A0A1W2PP11	408 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700	ISPD	A4D126	451 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700	CEACAM18	A8MTB9	384 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700	KDM4B	O94953	1096 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700	CDRT1	O95170	752 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700	GYPA	P02724	150 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700	ACAA1	P09110	424 aa	Predicted RBP	13.92	□□□□□ -0.18
UBC-208	ENST00000540700	CLEC2L	P0C7M8	214 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700	GLRA1	P23415	457 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700	PTGFR	P43088	359 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700	LMO4	P61968	165 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700	LSM3	P62310	102 aa	Known RBP	13.92	□□□□□ -0.18
UBC-208	ENST00000540700	LOXL1	Q08397	574 aa	Predicted RBP	13.92	□□□□□ -0.18
UBC-208	ENST00000540700	STUM	Q69YW2	141 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700	ASCL4	Q6XD76	172 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700	JAGN1	Q8N5M9	183 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700	OR51F2	Q8NH61	342 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700	RAB1C	Q92928	201 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700	CEP19	Q96LK0	163 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700	GPER1	Q99527	375 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700	KCNK15	Q9H427	330 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700	CTSZ	Q9UBR2	303 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700	METRN	Q9UJH8	293 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700	POLDIP2	Q9Y2S7	368 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700	TENM1	Q9UKZ4	2725 aa		13.92	□□□□□ -0.18
UBC-208	ENST00000540700	MGAM2	Q2M2H8	2515 aa		13.91	□□□□□ -0.18
UBC-208	ENST00000540700		F5H0A9	414 aa	Predicted RBP	13.91	□□□□□ -0.18
UBC-208	ENST00000540700	MAGEB3	O15480	346 aa		13.91	□□□□□ -0.18
UBC-208	ENST00000540700	AIRE	O43918	545 aa		13.91	□□□□□ -0.18
UBC-208	ENST00000540700	FSTL3	O95633	263 aa		13.91	□□□□□ -0.18
UBC-208	ENST00000540700	IGHV4-31	P0DP07	118 aa		13.91	□□□□□ -0.18
UBC-208	ENST00000540700	TMEM225B	P0DP42	221 aa		13.91	□□□□□ -0.18
UBC-208	ENST00000540700	MDH2	P40926	338 aa	Known RBP	13.91	□□□□□ -0.18
UBC-208	ENST00000540700	CEBPD	P49716	269 aa	Predicted RBP	13.91	□□□□□ -0.18
UBC-208	ENST00000540700	CAV3	P56539	151 aa		13.91	□□□□□ -0.18
UBC-208	ENST00000540700	SEC61A1	P61619	476 aa	Known RBP	13.91	□□□□□ -0.18
UBC-208	ENST00000540700	C1orf100	Q5SVJ3	147 aa		13.91	□□□□□ -0.18
UBC-208	ENST00000540700	FAM166A	Q6J272	317 aa		13.91	□□□□□ -0.18
UBC-208	ENST00000540700	SAXO1	Q8IYX7	474 aa		13.91	□□□□□ -0.18
UBC-208	ENST00000540700	FGFRL1	Q8N441	504 aa		13.91	□□□□□ -0.18
UBC-208	ENST00000540700	NKAIN3	Q8N8D7	197 aa		13.91	□□□□□ -0.18
UBC-208	ENST00000540700	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	13.91	□□□□□ -0.18
UBC-208	ENST00000540700	PXT1	Q8NFP0	134 aa		13.91	□□□□□ -0.18
UBC-208	ENST00000540700	SLC25A28	Q96A46	364 aa		13.91	□□□□□ -0.18
UBC-208	ENST00000540700	TIMD4	Q96H15	378 aa		13.91	□□□□□ -0.18
UBC-208	ENST00000540700	CYYR1	Q96J86	154 aa		13.91	□□□□□ -0.18
UBC-208	ENST00000540700	FAM192A	Q9GZU8	254 aa		13.91	□□□□□ -0.18
UBC-208	ENST00000540700	NEK6	Q9HC98	313 aa		13.91	□□□□□ -0.18
UBC-208	ENST00000540700	SMURF1	Q9HCE7	757 aa		13.91	□□□□□ -0.18
UBC-208	ENST00000540700	ZNF222	Q9UK12	451 aa		13.91	□□□□□ -0.18
UBC-208	ENST00000540700	IGKV1D-17	A0A075B6S4	117 aa		13.9	□□□□□ -0.18
UBC-208	ENST00000540700	GABARAP	O95166	117 aa		13.9	□□□□□ -0.18
UBC-208	ENST00000540700	IGHV2-5	P01817	119 aa		13.9	□□□□□ -0.18
UBC-208	ENST00000540700	PSG2	P11465	335 aa		13.9	□□□□□ -0.18
UBC-208	ENST00000540700	SELL	P14151	372 aa		13.9	□□□□□ -0.18
UBC-208	ENST00000540700	USF1	P22415	310 aa	Predicted RBP	13.9	□□□□□ -0.18
UBC-208	ENST00000540700	SDC2	P34741	201 aa		13.9	□□□□□ -0.18
UBC-208	ENST00000540700	RPL5	P46777	297 aa	Known RBP	13.9	□□□□□ -0.18
UBC-208	ENST00000540700	NCS1	P62166	190 aa		13.9	□□□□□ -0.18
UBC-208	ENST00000540700	CTF1	Q16619	201 aa		13.9	□□□□□ -0.18
UBC-208	ENST00000540700	TMEM155	Q4W5P6	130 aa		13.9	□□□□□ -0.18
UBC-208	ENST00000540700	GPR107	Q5VW38	600 aa		13.9	□□□□□ -0.18
UBC-208	ENST00000540700	METAP1D	Q6UB28	335 aa	Predicted RBP	13.9	□□□□□ -0.18
UBC-208	ENST00000540700	GPR141	Q7Z602	305 aa		13.9	□□□□□ -0.18
UBC-208	ENST00000540700	PEG10	Q86TG7	708 aa	Known RBP	13.9	□□□□□ -0.18
UBC-208	ENST00000540700	ANKRD13B	Q86YJ7	626 aa		13.9	□□□□□ -0.18
UBC-208	ENST00000540700	CDH26	Q8IXH8	852 aa		13.9	□□□□□ -0.18
UBC-208	ENST00000540700	MKX	Q8IYA7	352 aa		13.9	□□□□□ -0.18
UBC-208	ENST00000540700	CD177	Q8N6Q3	437 aa		13.9	□□□□□ -0.18
UBC-208	ENST00000540700	ANGPTL6	Q8NI99	470 aa		13.9	□□□□□ -0.18
UBC-208	ENST00000540700	ZNF581	Q9P0T4	197 aa		13.9	□□□□□ -0.18
UBC-208	ENST00000540700	NLK	Q9UBE8	527 aa		13.9	□□□□□ -0.18
UBC-208	ENST00000540700	SCOC	Q9UIL1	159 aa		13.9	□□□□□ -0.18
UBC-208	ENST00000540700	MRPS28	Q9Y2Q9	187 aa	Known RBP	13.9	□□□□□ -0.18
UBC-208	ENST00000540700	TRAV38-1	A0A0B4J264	116 aa		13.89	□□□□□ -0.19
UBC-208	ENST00000540700	MEGF11	A6BM72	1044 aa		13.89	□□□□□ -0.19
UBC-208	ENST00000540700	FAM157A	C9JC47	383 aa		13.89	□□□□□ -0.19
UBC-208	ENST00000540700	SLC22A1	O15245	554 aa		13.89	□□□□□ -0.19
UBC-208	ENST00000540700	NXPH2	O95156	264 aa		13.89	□□□□□ -0.19
UBC-208	ENST00000540700	MYL9	P24844	172 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 271.2 ms