RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 CBR4Q8N4T8 237 aa17.08■□□□□ 0.32
CHFR-217ENST00000540537 ASCC1Q8N9N2 400 aaKnown RBP17.08■□□□□ 0.32
CHFR-217ENST00000540537 C17orf50Q8WW18 174 aa17.08■□□□□ 0.32
CHFR-217ENST00000540537 SLAMF9Q96A28 289 aa17.08■□□□□ 0.32
CHFR-217ENST00000540537 AJUBAQ96IF1 538 aa17.08■□□□□ 0.32
CHFR-217ENST00000540537 F8VVB4 439 aa17.07■□□□□ 0.32
CHFR-217ENST00000540537 F8VWA3 439 aa17.07■□□□□ 0.32
CHFR-217ENST00000540537 ZNF737O75373 536 aa17.07■□□□□ 0.32
CHFR-217ENST00000540537 TSPAN9O75954 239 aa17.07■□□□□ 0.32
CHFR-217ENST00000540537 ISG15P05161 165 aa17.07■□□□□ 0.32
CHFR-217ENST00000540537 CCL3L1P16619 93 aa17.07■□□□□ 0.32
CHFR-217ENST00000540537 ATP1B3P54709 279 aa17.07■□□□□ 0.32
CHFR-217ENST00000540537 OR12D2P58182 307 aa17.07■□□□□ 0.32
CHFR-217ENST00000540537 ERVFRD-1P60508 538 aa17.07■□□□□ 0.32
CHFR-217ENST00000540537 AANATQ16613 207 aa17.07■□□□□ 0.32
CHFR-217ENST00000540537 UTS2BQ765I0 119 aa17.07■□□□□ 0.32
CHFR-217ENST00000540537 ADAT3Q96EY9 351 aaPredicted RBP17.07■□□□□ 0.32
CHFR-217ENST00000540537 MBOAT4Q96T53 435 aa17.07■□□□□ 0.32
CHFR-217ENST00000540537 MEGF9Q9H1U4 602 aa17.07■□□□□ 0.32
CHFR-217ENST00000540537 SEBOXQ9HB31 216 aaPredicted RBP17.07■□□□□ 0.32
CHFR-217ENST00000540537 FRRS1LQ9P0K9 344 aa17.07■□□□□ 0.32
CHFR-217ENST00000540537 EXOGQ9Y2C4 368 aaKnown RBP17.07■□□□□ 0.32
CHFR-217ENST00000540537 C17orf98A8MV24 154 aa17.06■□□□□ 0.32
CHFR-217ENST00000540537 H3BUX3 64 aa17.06■□□□□ 0.32
CHFR-217ENST00000540537 HTR1AP08908 422 aa17.06■□□□□ 0.32
CHFR-217ENST00000540537 PRKACBP22694 351 aa17.06■□□□□ 0.32
CHFR-217ENST00000540537 RBP2P50120 134 aa17.06■□□□□ 0.32
CHFR-217ENST00000540537 CCR9P51686 369 aa17.06■□□□□ 0.32
CHFR-217ENST00000540537 NANOS3P60323 173 aaKnown RBP17.06■□□□□ 0.32
CHFR-217ENST00000540537 KRTAP10-3P60369 221 aa17.06■□□□□ 0.32
CHFR-217ENST00000540537 ACTA2P62736 377 aa17.06■□□□□ 0.32
CHFR-217ENST00000540537 ACTG2P63267 376 aa17.06■□□□□ 0.32
CHFR-217ENST00000540537 LRRC75BQ2VPJ9 315 aa17.06■□□□□ 0.32
CHFR-217ENST00000540537 EGFL6Q8IUX8 553 aa17.06■□□□□ 0.32
CHFR-217ENST00000540537 ACBD7Q8N6N7 88 aa17.06■□□□□ 0.32
CHFR-217ENST00000540537 MRPL48Q96GC5 212 aaKnown RBP17.06■□□□□ 0.32
CHFR-217ENST00000540537 SSX3Q99909 188 aa17.06■□□□□ 0.32
CHFR-217ENST00000540537 C9orf16Q9BUW7 83 aa17.06■□□□□ 0.32
CHFR-217ENST00000540537 GMPPBQ9Y5P6 360 aa17.06■□□□□ 0.32
CHFR-217ENST00000540537 IGKV1-9A0A0C4DH69 117 aa17.05■□□□□ 0.32
CHFR-217ENST00000540537 TIMM23O14925 209 aa17.05■□□□□ 0.32
CHFR-217ENST00000540537 PIPP12273 146 aaPredicted RBP17.05■□□□□ 0.32
CHFR-217ENST00000540537 ZNF20P17024 532 aa17.05■□□□□ 0.32
CHFR-217ENST00000540537 GABRB1P18505 474 aa17.05■□□□□ 0.32
CHFR-217ENST00000540537 ATF1P18846 271 aa17.05■□□□□ 0.32
CHFR-217ENST00000540537 DLX6P56179 175 aa17.05■□□□□ 0.32
CHFR-217ENST00000540537 GDPD3Q7L5L3 318 aa17.05■□□□□ 0.32
CHFR-217ENST00000540537 ENTHD1Q8IYW4 607 aa17.05■□□□□ 0.32
CHFR-217ENST00000540537 OR8H2Q8N162 312 aa17.05■□□□□ 0.32
CHFR-217ENST00000540537 EMG1Q92979 244 aaKnown RBP17.05■□□□□ 0.32
CHFR-217ENST00000540537 LGALS12Q96DT0 336 aa17.05■□□□□ 0.32
CHFR-217ENST00000540537 SNX22Q96L94 193 aa17.05■□□□□ 0.32
CHFR-217ENST00000540537 MYCBPQ99417 103 aaPredicted RBP17.05■□□□□ 0.32
CHFR-217ENST00000540537 TRBV2A0A0J9YWF9 115 aa17.04■□□□□ 0.32
CHFR-217ENST00000540537 M0QZ24 198 aa17.04■□□□□ 0.32
CHFR-217ENST00000540537 MPZL2O60487 215 aa17.04■□□□□ 0.32
CHFR-217ENST00000540537 CYB5AP00167 134 aa17.04■□□□□ 0.32
CHFR-217ENST00000540537 RBP4P02753 201 aa17.04■□□□□ 0.32
CHFR-217ENST00000540537 COX7A1P24310 79 aa17.04■□□□□ 0.32
CHFR-217ENST00000540537 AZGP1P25311 298 aaKnown RBP17.04■□□□□ 0.32
CHFR-217ENST00000540537 BMXP51813 675 aa17.04■□□□□ 0.32
CHFR-217ENST00000540537 ZNF91Q05481 1191 aa17.04■□□□□ 0.32
CHFR-217ENST00000540537 LHFPL2Q6ZUX7 228 aa17.04■□□□□ 0.32
CHFR-217ENST00000540537 SPSB1Q96BD6 273 aa17.04■□□□□ 0.32
CHFR-217ENST00000540537 FGGYQ96C11 551 aa17.04■□□□□ 0.32
CHFR-217ENST00000540537 PELI1Q96FA3 418 aa17.04■□□□□ 0.32
CHFR-217ENST00000540537 C4orf36Q96KX1 117 aa17.04■□□□□ 0.32
CHFR-217ENST00000540537 PPA2Q9H2U2 334 aa17.04■□□□□ 0.32
CHFR-217ENST00000540537 HHLA2Q9UM44 414 aa17.04■□□□□ 0.32
CHFR-217ENST00000540537 VWFP04275 2813 aa17.03■□□□□ 0.32
CHFR-217ENST00000540537 J3QLW9 94 aa17.03■□□□□ 0.32
CHFR-217ENST00000540537 INMTO95050 263 aa17.03■□□□□ 0.32
CHFR-217ENST00000540537 HAND1O96004 215 aa17.03■□□□□ 0.32
CHFR-217ENST00000540537 ZNF728P0DKX0 622 aa17.03■□□□□ 0.32
CHFR-217ENST00000540537 ZNF19P17023 458 aa17.03■□□□□ 0.32
CHFR-217ENST00000540537 POU3F4P49335 361 aa17.03■□□□□ 0.32
CHFR-217ENST00000540537 MTCP1P56278 107 aa17.03■□□□□ 0.32
CHFR-217ENST00000540537 LGALS4P56470 323 aa17.03■□□□□ 0.32
CHFR-217ENST00000540537 EDDM3BP56851 147 aa17.03■□□□□ 0.32
CHFR-217ENST00000540537 MEF2CQ06413 473 aaPredicted RBP17.03■□□□□ 0.32
CHFR-217ENST00000540537 ZNF782Q6ZMW2 699 aaPredicted RBP17.03■□□□□ 0.32
CHFR-217ENST00000540537 FAM58AQ8N1B3 248 aa17.03■□□□□ 0.32
CHFR-217ENST00000540537 RBFOX1Q9NWB1 397 aaKnown RBP17.03■□□□□ 0.32
CHFR-217ENST00000540537 AASSQ9UDR5 926 aa17.03■□□□□ 0.32
CHFR-217ENST00000540537 TMEM82A0PJX8 343 aa17.02■□□□□ 0.32
CHFR-217ENST00000540537 OR4C45A6NMZ5 311 aa17.02■□□□□ 0.32
CHFR-217ENST00000540537 WIPF1O43516 503 aa17.02■□□□□ 0.32
CHFR-217ENST00000540537 MT-ND2P03891 347 aa17.02■□□□□ 0.32
CHFR-217ENST00000540537 DBTP11182 482 aaKnown RBP17.02■□□□□ 0.32
CHFR-217ENST00000540537 ALKBH1Q13686 389 aaKnown RBP17.02■□□□□ 0.32
CHFR-217ENST00000540537 GALEQ14376 348 aa17.02■□□□□ 0.32
CHFR-217ENST00000540537 ZNF146Q15072 292 aa17.02■□□□□ 0.32
CHFR-217ENST00000540537 SYS1Q8N2H4 156 aa17.02■□□□□ 0.32
CHFR-217ENST00000540537 OR13D1Q8NGV5 346 aa17.02■□□□□ 0.32
CHFR-217ENST00000540537 RHOXF1Q8NHV9 184 aa17.02■□□□□ 0.32
CHFR-217ENST00000540537 Q96MT0 163 aa17.02■□□□□ 0.32
CHFR-217ENST00000540537 OPALINQ96PE5 141 aa17.02■□□□□ 0.32
CHFR-217ENST00000540537 ALG8Q9BVK2 526 aa17.02■□□□□ 0.32
CHFR-217ENST00000540537 TCF7L1Q9HCS4 588 aa17.02■□□□□ 0.32
CHFR-217ENST00000540537 S100A14Q9HCY8 104 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms