RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 GP2P55259 537 aaKnown RBP9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 EDDM3BP56851 147 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 PSMA6P60900 246 aaKnown RBP9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 RPL23AP62750 156 aaKnown RBP9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 MEF2CQ06413 473 aaPredicted RBP9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 RIPPLY1Q0D2K3 151 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 RCN1Q15293 331 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 PLCXD3Q63HM9 321 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 GDPD3Q7L5L3 318 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 ZNF676Q8N7Q3 588 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 ZNF454Q8N9F8 522 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 OR2T33Q8NG76 320 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 OR9Q2Q8NGE9 314 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 OTOSQ8NHW6 89 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 PYDC1Q8WXC3 89 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 P2RX4Q99571 388 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 TMEM133Q9H2Q1 129 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 NIPAL2Q9H841 368 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 IL1RAPQ9NPH3 570 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 ZFP57Q9NU63 452 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 SLC22A13Q9Y226 551 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 POLDIP2Q9Y2S7 368 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 SESN1Q9Y6P5 492 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 LCE6AA0A183 80 aa9.22□□□□□ -0.93
CLSTN3-209ENST00000539982 hADV38S2A0JD32 116 aa9.22□□□□□ -0.93
CLSTN3-209ENST00000539982 ACOD1A6NK06 481 aa9.22□□□□□ -0.93
CLSTN3-209ENST00000539982 SH2D7A6NKC9 451 aaPredicted RBP9.22□□□□□ -0.93
CLSTN3-209ENST00000539982 FAM183AA6NL82 134 aa9.22□□□□□ -0.93
CLSTN3-209ENST00000539982 ZNF737O75373 536 aa9.22□□□□□ -0.93
CLSTN3-209ENST00000539982 NRASP01111 189 aa9.22□□□□□ -0.93
CLSTN3-209ENST00000539982 ZNF3P17036 446 aa9.22□□□□□ -0.93
CLSTN3-209ENST00000539982 ZNF684Q5T5D7 378 aa9.22□□□□□ -0.93
CLSTN3-209ENST00000539982 LCN1P1Q5VSP4 162 aa9.22□□□□□ -0.93
CLSTN3-209ENST00000539982 KCTD18Q6PI47 426 aaPredicted RBP9.22□□□□□ -0.93
CLSTN3-209ENST00000539982 C8orf86Q6ZUL3 223 aa9.22□□□□□ -0.93
CLSTN3-209ENST00000539982 TCF23Q7RTU1 214 aa9.22□□□□□ -0.93
CLSTN3-209ENST00000539982 OR2W3Q7Z3T1 314 aa9.22□□□□□ -0.93
CLSTN3-209ENST00000539982 ASCC1Q8N9N2 400 aaKnown RBP9.22□□□□□ -0.93
CLSTN3-209ENST00000539982 OR4P4Q8NGL7 312 aa9.22□□□□□ -0.93
CLSTN3-209ENST00000539982 CLEC7AQ9BXN2 247 aa9.22□□□□□ -0.93
CLSTN3-209ENST00000539982 MED20Q9H944 212 aa9.22□□□□□ -0.93
CLSTN3-209ENST00000539982 CMC2Q9NRP2 79 aa9.22□□□□□ -0.93
CLSTN3-209ENST00000539982 DPM3Q9P2X0 92 aa9.22□□□□□ -0.93
CLSTN3-209ENST00000539982 ENPP5Q9UJA9 477 aa9.22□□□□□ -0.93
CLSTN3-209ENST00000539982 H3BNX3 289 aa9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 M0QZK8 103 aa9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 BAG2O95816 211 aa9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 CHATP28329 748 aa9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 ARHGDIBP52566 201 aa9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 ERVK11-1P61568 191 aa9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 FAM98BQ52LJ0 330 aaKnown RBP9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 C9orf152Q5JTZ5 239 aa9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 C18orf65Q6ZTR6 163 aa9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 ZNF329Q86UD4 541 aa9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 ADGRG5Q8IZF4 528 aa9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 OR8H2Q8N162 312 aa9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 BATF2Q8N1L9 274 aa9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 Q8NFD4 153 aa9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 CANT1Q8WVQ1 401 aa9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 OTULINQ96BN8 352 aa9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 PRR25Q96S07 402 aa9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 PAPOLBQ9NRJ5 636 aaKnown RBP9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 ARMC1Q9NVT9 282 aa9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 GAR1Q9NY12 217 aaKnown RBP9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 NKX1-2Q9UD57 310 aaPredicted RBP9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 HHLA2Q9UM44 414 aa9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 PIGLQ9Y2B2 252 aa9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 AP4S1Q9Y587 144 aa9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 LYVE1Q9Y5Y7 322 aa9.21□□□□□ -0.94
CLSTN3-209ENST00000539982 DSCAML1Q8TD84 2053 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 TMEM269A0A1B0GVZ9 245 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 PQLC2LA1A4F0 135 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 NUDT19A8MXV4 375 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 LEUTXA8MZ59 168 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 TNFRSF11BO00300 401 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 SELENOFO60613 162 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 CCNB2O95067 398 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 LYL1P12980 280 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 HOXB6P17509 224 aaKnown RBP9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 MPZP25189 248 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 BDH1Q02338 343 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 PLBD1Q6P4A8 553 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 KRT77Q7Z794 578 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 RTN4RL2Q86UN3 420 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 COMMD2Q86X83 199 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 ABHD12Q8N2K0 398 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 AQP11Q8NBQ7 271 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 OR51E1Q8TCB6 317 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 CHPT1Q8WUD6 406 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 SNX22Q96L94 193 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 TEAD3Q99594 435 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 OR51V1Q9H2C8 321 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 MAGIXQ9H6Y5 334 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 GPR84Q9NQS5 396 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 FAM206AQ9NX38 181 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 KLHDC2Q9Y2U9 406 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 LINC00312Q9Y6C7 94 aa9.2□□□□□ -0.94
CLSTN3-209ENST00000539982 SACSQ9NZJ4 4579 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 TMEM82A0PJX8 343 aa9.19□□□□□ -0.94
CLSTN3-209ENST00000539982 PSMD9O00233 223 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms