RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 NAV2Q8IVL1 2488 aa13.05□□□□□ -0.32
DDB1-216ENST00000539739 POLQO75417 2590 aa13.04□□□□□ -0.32
DDB1-216ENST00000539739 TRAV1-2A0A0B4J238 106 aa13.04□□□□□ -0.32
DDB1-216ENST00000539739 CDC14BO60729 498 aa13.04□□□□□ -0.32
DDB1-216ENST00000539739 IGHV4-39P01824 125 aa13.04□□□□□ -0.32
DDB1-216ENST00000539739 IRF2P14316 349 aa13.04□□□□□ -0.32
DDB1-216ENST00000539739 KISS1Q15726 138 aa13.04□□□□□ -0.32
DDB1-216ENST00000539739 MPPED2Q15777 294 aa13.04□□□□□ -0.32
DDB1-216ENST00000539739 HFEQ30201 348 aa13.04□□□□□ -0.32
DDB1-216ENST00000539739 SPRNQ5BIV9 151 aa13.04□□□□□ -0.32
DDB1-216ENST00000539739 SLC16A12Q6ZSM3 486 aa13.04□□□□□ -0.32
DDB1-216ENST00000539739 LRRC75A-AS1Q8N1F1 130 aa13.04□□□□□ -0.32
DDB1-216ENST00000539739 SCCPDHQ8NBX0 429 aa13.04□□□□□ -0.32
DDB1-216ENST00000539739 OR5T2Q8NGG2 359 aa13.04□□□□□ -0.32
DDB1-216ENST00000539739 OR52N4Q8NGI2 321 aa13.04□□□□□ -0.32
DDB1-216ENST00000539739 CCL17Q92583 94 aa13.04□□□□□ -0.32
DDB1-216ENST00000539739 MARC2Q969Z3 335 aa13.04□□□□□ -0.32
DDB1-216ENST00000539739 TLNRD1Q9H1K6 362 aa13.04□□□□□ -0.32
DDB1-216ENST00000539739 MYOZ1Q9NP98 299 aaPredicted RBP13.04□□□□□ -0.32
DDB1-216ENST00000539739 ARID1AO14497 2285 aa13.04□□□□□ -0.32
DDB1-216ENST00000539739 hCG_1807616A0A1W2PRN6 198 aa13.03□□□□□ -0.32
DDB1-216ENST00000539739 LRRC30A6NM36 301 aa13.03□□□□□ -0.32
DDB1-216ENST00000539739 CDIPTO14735 213 aa13.03□□□□□ -0.32
DDB1-216ENST00000539739 PDCD5O14737 125 aa13.03□□□□□ -0.32
DDB1-216ENST00000539739 LY6HO94772 140 aa13.03□□□□□ -0.32
DDB1-216ENST00000539739 ZNF93P35789 620 aaPredicted RBP13.03□□□□□ -0.32
DDB1-216ENST00000539739 ARHGDIBP52566 201 aa13.03□□□□□ -0.32
DDB1-216ENST00000539739 CTF1Q16619 201 aa13.03□□□□□ -0.32
DDB1-216ENST00000539739 GLT8D1Q68CQ7 371 aa13.03□□□□□ -0.32
DDB1-216ENST00000539739 HAGHLQ6PII5 290 aaPredicted RBP13.03□□□□□ -0.32
DDB1-216ENST00000539739 WDR86Q86TI4 376 aa13.03□□□□□ -0.32
DDB1-216ENST00000539739 STX12Q86Y82 276 aa13.03□□□□□ -0.32
DDB1-216ENST00000539739 C1orf87Q8N0U7 546 aa13.03□□□□□ -0.32
DDB1-216ENST00000539739 PNLDC1Q8NA58 520 aaKnown RBP13.03□□□□□ -0.32
DDB1-216ENST00000539739 ZNF680Q8NEM1 530 aa13.03□□□□□ -0.32
DDB1-216ENST00000539739 ZNF671Q8TAW3 534 aa13.03□□□□□ -0.32
DDB1-216ENST00000539739 Q8TCH9 128 aa13.03□□□□□ -0.32
DDB1-216ENST00000539739 RPL3LQ92901 407 aaKnown RBP13.03□□□□□ -0.32
DDB1-216ENST00000539739 SPACA5Q96QH8 159 aa13.03□□□□□ -0.32
DDB1-216ENST00000539739 IFT46Q9NQC8 304 aa13.03□□□□□ -0.32
DDB1-216ENST00000539739 C1orf123Q9NWV4 160 aa13.03□□□□□ -0.32
DDB1-216ENST00000539739 POLDIP2Q9Y2S7 368 aa13.03□□□□□ -0.32
DDB1-216ENST00000539739 ASH1LQ9NR48 2969 aaKnown RBP13.03□□□□□ -0.32
DDB1-216ENST00000539739 IGKV1-27A0A075B6S5 117 aa13.02□□□□□ -0.32
DDB1-216ENST00000539739 J3QT63 122 aa13.02□□□□□ -0.32
DDB1-216ENST00000539739 SSX4O60224 188 aa13.02□□□□□ -0.32
DDB1-216ENST00000539739 CYB5AP00167 134 aa13.02□□□□□ -0.32
DDB1-216ENST00000539739 COL8A2P25067 703 aa13.02□□□□□ -0.32
DDB1-216ENST00000539739 ETV6P41212 452 aa13.02□□□□□ -0.32
DDB1-216ENST00000539739 POU3F4P49335 361 aa13.02□□□□□ -0.32
DDB1-216ENST00000539739 LSM3P62310 102 aaKnown RBP13.02□□□□□ -0.32
DDB1-216ENST00000539739 LRRTM1Q86UE6 522 aa13.02□□□□□ -0.32
DDB1-216ENST00000539739 ANGPTL5Q86XS5 388 aa13.02□□□□□ -0.32
DDB1-216ENST00000539739 DYNC2LI1Q8TCX1 351 aa13.02□□□□□ -0.32
DDB1-216ENST00000539739 FOXRED1Q96CU9 486 aaPredicted RBP13.02□□□□□ -0.32
DDB1-216ENST00000539739 PKIBQ9C010 78 aa13.02□□□□□ -0.32
DDB1-216ENST00000539739 TREM2Q9NZC2 230 aa13.02□□□□□ -0.32
DDB1-216ENST00000539739 ANKRD17O75179 2603 aaKnown RBP13.02□□□□□ -0.33
DDB1-216ENST00000539739 MTNR1BP49286 362 aa13.02□□□□□ -0.33
DDB1-216ENST00000539739 CD83Q01151 205 aa13.02□□□□□ -0.33
DDB1-216ENST00000539739 CARTPTQ16568 116 aa13.02□□□□□ -0.33
DDB1-216ENST00000539739 FAM209BQ5JX69 171 aa13.02□□□□□ -0.33
DDB1-216ENST00000539739 STEAP3Q658P3 488 aa13.02□□□□□ -0.33
DDB1-216ENST00000539739 TPRA1Q86W33 373 aa13.02□□□□□ -0.33
DDB1-216ENST00000539739 C11orf53Q8IXP5 236 aa13.02□□□□□ -0.33
DDB1-216ENST00000539739 MKXQ8IYA7 352 aa13.02□□□□□ -0.33
DDB1-216ENST00000539739 JAGN1Q8N5M9 183 aa13.02□□□□□ -0.33
DDB1-216ENST00000539739 AQP3Q92482 292 aa13.02□□□□□ -0.33
DDB1-216ENST00000539739 RFT1Q96AA3 541 aa13.02□□□□□ -0.33
DDB1-216ENST00000539739 METTL17Q9H7H0 456 aaPredicted RBP13.02□□□□□ -0.33
DDB1-216ENST00000539739 CHODLQ9H9P2 273 aa13.02□□□□□ -0.33
DDB1-216ENST00000539739 TMEM106BQ9NUM4 274 aa13.02□□□□□ -0.33
DDB1-216ENST00000539739 RNF7Q9UBF6 113 aa13.02□□□□□ -0.33
DDB1-216ENST00000539739 LYNX1G3V0Z9 82 aa13.01□□□□□ -0.33
DDB1-216ENST00000539739 SSX5O60225 188 aa13.01□□□□□ -0.33
DDB1-216ENST00000539739 PLATP00750 562 aa13.01□□□□□ -0.33
DDB1-216ENST00000539739 CSF3P09919 207 aa13.01□□□□□ -0.33
DDB1-216ENST00000539739 LYNX1P0DP58 116 aa13.01□□□□□ -0.33
DDB1-216ENST00000539739 ADRA2CP18825 462 aa13.01□□□□□ -0.33
DDB1-216ENST00000539739 MPZP25189 248 aa13.01□□□□□ -0.33
DDB1-216ENST00000539739 CFHR2P36980 270 aa13.01□□□□□ -0.33
DDB1-216ENST00000539739 PMELP40967 661 aa13.01□□□□□ -0.33
DDB1-216ENST00000539739 PDLIM4P50479 330 aa13.01□□□□□ -0.33
DDB1-216ENST00000539739 RAB25P57735 213 aa13.01□□□□□ -0.33
DDB1-216ENST00000539739 IL24Q13007 206 aa13.01□□□□□ -0.33
DDB1-216ENST00000539739 PDZK1IP1Q13113 114 aa13.01□□□□□ -0.33
DDB1-216ENST00000539739 TMEM65Q6PI78 240 aa13.01□□□□□ -0.33
DDB1-216ENST00000539739 WDR82Q6UXN9 313 aa13.01□□□□□ -0.33
DDB1-216ENST00000539739 ZNF826PQ6ZT77 177 aa13.01□□□□□ -0.33
DDB1-216ENST00000539739 PEG10Q86TG7 708 aaKnown RBP13.01□□□□□ -0.33
DDB1-216ENST00000539739 CALHM1Q8IU99 346 aa13.01□□□□□ -0.33
DDB1-216ENST00000539739 YIPF5Q969M3 257 aa13.01□□□□□ -0.33
DDB1-216ENST00000539739 S100A13Q99584 98 aa13.01□□□□□ -0.33
DDB1-216ENST00000539739 RNF167Q9H6Y7 350 aa13.01□□□□□ -0.33
DDB1-216ENST00000539739 AK6Q9Y3D8 172 aaKnown RBP13.01□□□□□ -0.33
DDB1-216ENST00000539739 ITPR2Q14571 2701 aa13.01□□□□□ -0.33
DDB1-216ENST00000539739 F8W036 122 aa13□□□□□ -0.33
DDB1-216ENST00000539739 TMEM225BP0DP42 221 aa13□□□□□ -0.33
DDB1-216ENST00000539739 RAB3BP20337 219 aa13□□□□□ -0.33
DDB1-216ENST00000539739 SDC2P34741 201 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms