RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 NUDT16L1Q9BRJ7 211 aaKnown RBP13.66□□□□□ -0.22
TRAF3-204ENST00000539721 ABCB10Q9NRK6 738 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 DECR2Q9NUI1 292 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 A0A1W2PPR1 153 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 A1L4Q6 167 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 GEMIN2O14893 280 aaKnown RBP13.66□□□□□ -0.22
TRAF3-204ENST00000539721 NOS1APO75052 506 aaPredicted RBP13.66□□□□□ -0.22
TRAF3-204ENST00000539721 NXPH2O95156 264 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 CLDN1O95832 211 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 ACAA1P09110 424 aaPredicted RBP13.66□□□□□ -0.22
TRAF3-204ENST00000539721 PTHLHP12272 177 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 TNFRSF1AP19438 455 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 BLVRBP30043 206 aaPredicted RBP13.66□□□□□ -0.22
TRAF3-204ENST00000539721 ERVK11-1P61568 191 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 TESK1Q15569 626 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 RNASE12Q5GAN4 147 aaKnown RBP13.66□□□□□ -0.22
TRAF3-204ENST00000539721 FAM209AQ5JX71 171 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 AGAP6Q5VW22 663 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 LRRC29Q8WV35 223 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 GCDHQ92947 438 aaPredicted RBP13.66□□□□□ -0.22
TRAF3-204ENST00000539721 RAB3CQ96E17 227 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 EGLN1Q9GZT9 426 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 CBLN4Q9NTU7 201 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 IL36RNQ9UBH0 155 aa13.66□□□□□ -0.22
TRAF3-204ENST00000539721 C3orf80F5H4A9 247 aa13.65□□□□□ -0.22
TRAF3-204ENST00000539721 CTDSPLO15194 276 aa13.65□□□□□ -0.22
TRAF3-204ENST00000539721 UPK1BO75841 260 aa13.65□□□□□ -0.22
TRAF3-204ENST00000539721 BAK1Q16611 211 aa13.65□□□□□ -0.22
TRAF3-204ENST00000539721 PCGF3Q3KNV8 242 aa13.65□□□□□ -0.22
TRAF3-204ENST00000539721 NHLRC3Q5JS37 347 aa13.65□□□□□ -0.22
TRAF3-204ENST00000539721 OR10Z1Q8NGY1 313 aa13.65□□□□□ -0.22
TRAF3-204ENST00000539721 AUNIPQ9H7T9 357 aa13.65□□□□□ -0.22
TRAF3-204ENST00000539721 ZMAT3Q9HA38 289 aaKnown RBP13.65□□□□□ -0.22
TRAF3-204ENST00000539721 UBTD1Q9HAC8 227 aa13.65□□□□□ -0.22
TRAF3-204ENST00000539721 SAP30LQ9HAJ7 183 aa13.65□□□□□ -0.22
TRAF3-204ENST00000539721 PALMDQ9NP74 551 aa13.65□□□□□ -0.22
TRAF3-204ENST00000539721 PKDREJQ9NTG1 2253 aa13.65□□□□□ -0.22
TRAF3-204ENST00000539721 ABCA4P78363 2273 aa13.64□□□□□ -0.23
TRAF3-204ENST00000539721 CACNA1DQ01668 2161 aa13.64□□□□□ -0.23
TRAF3-204ENST00000539721 ARFGEF3Q5TH69 2177 aa13.64□□□□□ -0.23
TRAF3-204ENST00000539721 FOXI3A8MTJ6 420 aaPredicted RBP13.64□□□□□ -0.23
TRAF3-204ENST00000539721 CSF3P09919 207 aa13.64□□□□□ -0.23
TRAF3-204ENST00000539721 GNB3P16520 340 aa13.64□□□□□ -0.23
TRAF3-204ENST00000539721 GLRA1P23415 457 aa13.64□□□□□ -0.23
TRAF3-204ENST00000539721 PMELP40967 661 aa13.64□□□□□ -0.23
TRAF3-204ENST00000539721 TMEM50BP56557 158 aa13.64□□□□□ -0.23
TRAF3-204ENST00000539721 DGCR2P98153 550 aa13.64□□□□□ -0.23
TRAF3-204ENST00000539721 ZNF181Q2M3W8 571 aa13.64□□□□□ -0.23
TRAF3-204ENST00000539721 ZNF260Q3ZCT1 412 aa13.64□□□□□ -0.23
TRAF3-204ENST00000539721 CDNFQ49AH0 187 aa13.64□□□□□ -0.23
TRAF3-204ENST00000539721 TRIQKQ629K1 86 aa13.64□□□□□ -0.23
TRAF3-204ENST00000539721 Q6ZTK2 550 aa13.64□□□□□ -0.23
TRAF3-204ENST00000539721 ERGIC1Q969X5 290 aa13.64□□□□□ -0.23
TRAF3-204ENST00000539721 ARHGAP5-AS1Q96IT6 56 aa13.64□□□□□ -0.23
TRAF3-204ENST00000539721 GCM1Q9NP62 436 aa13.64□□□□□ -0.23
TRAF3-204ENST00000539721 FAM90A10PA6NDY2 464 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 FAM90A18PA6NE21 464 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 FAM90A16PA6NEW6 464 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 FAM90A20PA6NIJ5 464 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 FAM90A8PA6NJQ4 464 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 FAM90A7PA6NKC0 464 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 FAM90A22PA8MWA6 464 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 FAM90A12PA8MX19 464 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 FAM90A5PA8MXJ8 464 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 FAM90A23PA8MXZ1 464 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 FAM90A15PP0C7V4 464 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 FAM90A13PP0C7W8 464 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 FAM90A14PP0C7W9 464 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 FAM90A24PP0C7X0 464 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 IL7P13232 177 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 HIST1H1DP16402 221 aaKnown RBP13.63□□□□□ -0.23
TRAF3-204ENST00000539721 PPOXP50336 477 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 MRPS10P82664 201 aaKnown RBP13.63□□□□□ -0.23
TRAF3-204ENST00000539721 PDCD1Q15116 288 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 PLAC9Q5JTB6 97 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 NKAPLQ5M9Q1 402 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 FIP1L1Q6UN15 594 aaKnown RBP13.63□□□□□ -0.23
TRAF3-204ENST00000539721 RTN4RL2Q86UN3 420 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 OR11L1Q8NGX0 322 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 SMIM4Q8WVI0 70 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 POM121Q96HA1 1249 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 VRK1Q99986 396 aaPredicted RBP13.63□□□□□ -0.23
TRAF3-204ENST00000539721 HES4Q9HCC6 221 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 FBXO9Q9UK97 447 aaPredicted RBP13.63□□□□□ -0.23
TRAF3-204ENST00000539721 PPP1R3CQ9UQK1 317 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 TMEM235A6NFC5 223 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 GABARAPH6UMI1 98 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 WNT9BO14905 357 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 GSTZ1O43708 216 aaPredicted RBP13.63□□□□□ -0.23
TRAF3-204ENST00000539721 OR7C1O76099 320 aaPredicted RBP13.63□□□□□ -0.23
TRAF3-204ENST00000539721 SOD3P08294 240 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 DANCRP0C864 163 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 COX6B1P14854 86 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 DUSP1P28562 367 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 PRSS3P35030 304 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 IFITM3Q01628 133 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 IKZF1Q13422 519 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 IL13RA2Q14627 380 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 MPV17LQ2QL34 196 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 SIGIRRQ6IA17 410 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms