RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 F8VWA3 439 aa18.05■□□□□ 0.48
SCARB1-206ENST00000539320 H3BNX3 289 aa18.05■□□□□ 0.48
SCARB1-206ENST00000539320 ZNF737O75373 536 aa18.05■□□□□ 0.48
SCARB1-206ENST00000539320 CHRM2P08172 466 aa18.05■□□□□ 0.48
SCARB1-206ENST00000539320 LY6EQ16553 131 aa18.05■□□□□ 0.48
SCARB1-206ENST00000539320 TMEM244Q5VVB8 128 aa18.05■□□□□ 0.48
SCARB1-206ENST00000539320 ASPHD2Q6ICH7 369 aa18.05■□□□□ 0.48
SCARB1-206ENST00000539320 ZFP1Q6P2D0 407 aa18.05■□□□□ 0.48
SCARB1-206ENST00000539320 RDH10Q8IZV5 341 aa18.05■□□□□ 0.48
SCARB1-206ENST00000539320 EMG1Q92979 244 aaKnown RBP18.05■□□□□ 0.48
SCARB1-206ENST00000539320 UBE2FQ969M7 185 aa18.05■□□□□ 0.48
SCARB1-206ENST00000539320 RNF166Q96A37 237 aaPredicted RBP18.05■□□□□ 0.48
SCARB1-206ENST00000539320 MMP27Q9H306 513 aa18.05■□□□□ 0.48
SCARB1-206ENST00000539320 INMTO95050 263 aa18.04■□□□□ 0.48
SCARB1-206ENST00000539320 GABRA5P31644 462 aa18.04■□□□□ 0.48
SCARB1-206ENST00000539320 POU3F4P49335 361 aa18.04■□□□□ 0.48
SCARB1-206ENST00000539320 ALDH3A2P51648 485 aa18.04■□□□□ 0.48
SCARB1-206ENST00000539320 DLX6P56179 175 aa18.04■□□□□ 0.48
SCARB1-206ENST00000539320 LGALS4P56470 323 aa18.04■□□□□ 0.48
SCARB1-206ENST00000539320 EDDM3BP56851 147 aa18.04■□□□□ 0.48
SCARB1-206ENST00000539320 SNRPGP62308 76 aaKnown RBP18.04■□□□□ 0.48
SCARB1-206ENST00000539320 KPNB1Q14974 876 aaKnown RBP18.04■□□□□ 0.48
SCARB1-206ENST00000539320 SLC25A30Q5SVS4 291 aa18.04■□□□□ 0.48
SCARB1-206ENST00000539320 MEDAGQ5VYS4 303 aa18.04■□□□□ 0.48
SCARB1-206ENST00000539320 Q8IYB0 196 aa18.04■□□□□ 0.48
SCARB1-206ENST00000539320 DNAAF1Q8NEP3 725 aa18.04■□□□□ 0.48
SCARB1-206ENST00000539320 ADAT3Q96EY9 351 aaPredicted RBP18.04■□□□□ 0.48
SCARB1-206ENST00000539320 DSCAML1Q8TD84 2053 aa18.03■□□□□ 0.48
SCARB1-206ENST00000539320 NOTCH1P46531 2555 aa18.03■□□□□ 0.48
SCARB1-206ENST00000539320 C17orf98A8MV24 154 aa18.03■□□□□ 0.48
SCARB1-206ENST00000539320 SLC16A6O15403 523 aa18.03■□□□□ 0.48
SCARB1-206ENST00000539320 ZNF20P17024 532 aa18.03■□□□□ 0.48
SCARB1-206ENST00000539320 PAX6P26367 422 aa18.03■□□□□ 0.48
SCARB1-206ENST00000539320 RBP2P50120 134 aa18.03■□□□□ 0.48
SCARB1-206ENST00000539320 ATP1B3P54709 279 aa18.03■□□□□ 0.48
SCARB1-206ENST00000539320 GABPB1Q06547 395 aaPredicted RBP18.03■□□□□ 0.48
SCARB1-206ENST00000539320 ZIK1Q3SY52 487 aaPredicted RBP18.03■□□□□ 0.48
SCARB1-206ENST00000539320 UTS2BQ765I0 119 aa18.03■□□□□ 0.48
SCARB1-206ENST00000539320 GDPD3Q7L5L3 318 aa18.03■□□□□ 0.48
SCARB1-206ENST00000539320 KCTD20Q7Z5Y7 419 aa18.03■□□□□ 0.48
SCARB1-206ENST00000539320 EGFL6Q8IUX8 553 aa18.03■□□□□ 0.48
SCARB1-206ENST00000539320 OR8H2Q8N162 312 aa18.03■□□□□ 0.48
SCARB1-206ENST00000539320 SNX22Q96L94 193 aa18.03■□□□□ 0.48
SCARB1-206ENST00000539320 RAB18Q9NP72 206 aa18.03■□□□□ 0.48
SCARB1-206ENST00000539320 DAPL1A0PJW8 107 aa18.02■□□□□ 0.48
SCARB1-206ENST00000539320 TMEM82A0PJX8 343 aa18.02■□□□□ 0.48
SCARB1-206ENST00000539320 E9PQ18 207 aa18.02■□□□□ 0.48
SCARB1-206ENST00000539320 J3QRE1 110 aa18.02■□□□□ 0.48
SCARB1-206ENST00000539320 HAND1O96004 215 aa18.02■□□□□ 0.48
SCARB1-206ENST00000539320 RBP4P02753 201 aa18.02■□□□□ 0.48
SCARB1-206ENST00000539320 HTR1AP08908 422 aa18.02■□□□□ 0.48
SCARB1-206ENST00000539320 ZNF728P0DKX0 622 aa18.02■□□□□ 0.48
SCARB1-206ENST00000539320 ATF1P18846 271 aa18.02■□□□□ 0.48
SCARB1-206ENST00000539320 OR12D2P58182 307 aa18.02■□□□□ 0.48
SCARB1-206ENST00000539320 SLC35E4Q6ICL7 350 aa18.02■□□□□ 0.48
SCARB1-206ENST00000539320 FDX2Q6P4F2 183 aa18.02■□□□□ 0.48
SCARB1-206ENST00000539320 OR4C13Q8NGP0 309 aa18.02■□□□□ 0.48
SCARB1-206ENST00000539320 MBOAT4Q96T53 435 aa18.02■□□□□ 0.48
SCARB1-206ENST00000539320 FBLN5Q9UBX5 448 aa18.02■□□□□ 0.48
SCARB1-206ENST00000539320 IGKV1-9A0A0C4DH69 117 aa18.01■□□□□ 0.47
SCARB1-206ENST00000539320 TRBV2A0A0J9YWF9 115 aa18.01■□□□□ 0.47
SCARB1-206ENST00000539320 MEX3AA1L020 520 aaKnown RBP18.01■□□□□ 0.47
SCARB1-206ENST00000539320 SNTNA6NMZ2 147 aa18.01■□□□□ 0.47
SCARB1-206ENST00000539320 CYB5AP00167 134 aa18.01■□□□□ 0.47
SCARB1-206ENST00000539320 ISG15P05161 165 aa18.01■□□□□ 0.47
SCARB1-206ENST00000539320 PRKACBP22694 351 aa18.01■□□□□ 0.47
SCARB1-206ENST00000539320 AZGP1P25311 298 aaKnown RBP18.01■□□□□ 0.47
SCARB1-206ENST00000539320 NANOS3P60323 173 aaKnown RBP18.01■□□□□ 0.47
SCARB1-206ENST00000539320 DEFA6Q01524 100 aa18.01■□□□□ 0.47
SCARB1-206ENST00000539320 ZNF91Q05481 1191 aa18.01■□□□□ 0.47
SCARB1-206ENST00000539320 EDDM3AQ14507 147 aa18.01■□□□□ 0.47
SCARB1-206ENST00000539320 CCDC121Q6ZUS5 278 aa18.01■□□□□ 0.47
SCARB1-206ENST00000539320 LHFPL2Q6ZUX7 228 aa18.01■□□□□ 0.47
SCARB1-206ENST00000539320 LHFPL4Q7Z7J7 247 aa18.01■□□□□ 0.47
SCARB1-206ENST00000539320 ENTHD1Q8IYW4 607 aa18.01■□□□□ 0.47
SCARB1-206ENST00000539320 CBR4Q8N4T8 237 aa18.01■□□□□ 0.47
SCARB1-206ENST00000539320 ACBD7Q8N6N7 88 aa18.01■□□□□ 0.47
SCARB1-206ENST00000539320 OR13D1Q8NGV5 346 aa18.01■□□□□ 0.47
SCARB1-206ENST00000539320 SPSB1Q96BD6 273 aa18.01■□□□□ 0.47
SCARB1-206ENST00000539320 FOXRED1Q96CU9 486 aaPredicted RBP18.01■□□□□ 0.47
SCARB1-206ENST00000539320 RANBP3Q9H6Z4 567 aaPredicted RBP18.01■□□□□ 0.47
SCARB1-206ENST00000539320 RBFOX1Q9NWB1 397 aaKnown RBP18.01■□□□□ 0.47
SCARB1-206ENST00000539320 FRRS1LQ9P0K9 344 aa18.01■□□□□ 0.47
SCARB1-206ENST00000539320 IL36RNQ9UBH0 155 aa18.01■□□□□ 0.47
SCARB1-206ENST00000539320 ODF3BA8MYP8 253 aa18■□□□□ 0.47
SCARB1-206ENST00000539320 IGHA1P01876 353 aa18■□□□□ 0.47
SCARB1-206ENST00000539320 BCL3P20749 454 aa18■□□□□ 0.47
SCARB1-206ENST00000539320 MTCP1P56278 107 aa18■□□□□ 0.47
SCARB1-206ENST00000539320 ACTA2P62736 377 aa18■□□□□ 0.47
SCARB1-206ENST00000539320 ACTG2P63267 376 aa18■□□□□ 0.47
SCARB1-206ENST00000539320 MEF2CQ06413 473 aaPredicted RBP18■□□□□ 0.47
SCARB1-206ENST00000539320 CRIP3Q6Q6R5 217 aa18■□□□□ 0.47
SCARB1-206ENST00000539320 LIAT1Q6ZQX7 453 aa18■□□□□ 0.47
SCARB1-206ENST00000539320 TCF23Q7RTU1 214 aa18■□□□□ 0.47
SCARB1-206ENST00000539320 PPP1R35Q8TAP8 253 aa18■□□□□ 0.47
SCARB1-206ENST00000539320 FGGYQ96C11 551 aa18■□□□□ 0.47
SCARB1-206ENST00000539320 MRPL48Q96GC5 212 aaKnown RBP18■□□□□ 0.47
SCARB1-206ENST00000539320 ZNF714Q96N38 554 aa18■□□□□ 0.47
SCARB1-206ENST00000539320 SEBOXQ9HB31 216 aaPredicted RBP18■□□□□ 0.47
SCARB1-206ENST00000539320 HHLA2Q9UM44 414 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms