RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 CALCBP10092 127 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 ADRA2CP18825 462 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 PCMT1P22061 227 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 GATA3P23771 443 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 GABRA2P47869 451 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 GP2P55259 537 aaKnown RBP9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 RIPPLY3P57055 190 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 IL13RA1P78552 427 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 EMX1Q04741 257 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 PAX8Q06710 450 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 MLLT11Q13015 90 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 TPBGQ13641 420 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 LIPKQ5VXJ0 399 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 UNQ9370/PRO34162Q6UXP9 181 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 BTN2A1Q7KYR7 527 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 SLC36A1Q7Z2H8 476 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 C1QL2Q7Z5L3 287 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 RAB40AQ8WXH6 277 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 ST8SIA4Q92187 359 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 SDSLQ96GA7 329 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 MGLLQ99685 303 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 TMED9Q9BVK6 235 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 BEX2Q9BXY8 128 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 ISYNA1Q9NPH2 558 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 ACOT13Q9NPJ3 140 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 LPAR3Q9UBY5 353 aa9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 SF3B6Q9Y3B4 125 aaKnown RBP9.37□□□□□ -0.91
TNFRSF1A-208ENST00000536194 KIR2DS1A0A191URI9 304 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 NKX6-3A6NJ46 265 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 NDUFB3O43676 98 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 KDM4BO94953 1096 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 KNG1P01042 644 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 FSHBP01225 129 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 ALDOBP05062 364 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 SFTPBP07988 381 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 FAM157CP0CG43 387 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 CPEP16870 476 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 BDKRB2P30411 391 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 PRDX2P32119 198 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 TGFBR2P37173 567 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 OR3A4PP47883 348 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 RPS25P62851 125 aaKnown RBP9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 GPR50Q13585 617 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 SSX1Q16384 188 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 ACSM3Q53FZ2 586 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 TMEM91Q6ZNR0 172 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 ZNF367Q7RTV3 350 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 PRIMA1Q86XR5 153 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 PHC2Q8IXK0 858 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 MKXQ8IYA7 352 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 SAXO1Q8IYX7 474 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 SPARTQ8N0X7 666 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 UFD1Q92890 307 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 EMG1Q92979 244 aaKnown RBP9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 TMEM203Q969S6 136 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 MED30Q96HR3 178 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 NUDT16L1Q9BRJ7 211 aaKnown RBP9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 YTHDF1Q9BYJ9 559 aaKnown RBP9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 PPIL3Q9H2H8 161 aaKnown RBP9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 C7orf69Q9H7B7 122 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 NOX4Q9NPH5 578 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 TMEM138Q9NPI0 162 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 SLC25A10Q9UBX3 287 aaPredicted RBP9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 OR14J1Q9UGF5 321 aa9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 RPUSD1Q9UJJ7 312 aaKnown RBP9.36□□□□□ -0.91
TNFRSF1A-208ENST00000536194 CUBNO60494 3623 aa9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 ENSAO43768 121 aaKnown RBP9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 MRPS14O60783 128 aaKnown RBP9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 TMEM225BP0DP42 221 aa9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 SRD5A1P18405 259 aa9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 HNF1AP20823 631 aa9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 DUSP1P28562 367 aa9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 CAV3P56539 151 aa9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 PPP3R1P63098 170 aa9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 LRRC10Q5BKY1 277 aa9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 DDI2Q5TDH0 399 aa9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 SATL1Q86VE3 508 aa9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 LYPD6Q86Y78 171 aa9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 Q8IYB0 196 aa9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 FAM58AQ8N1B3 248 aa9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 ZNF561Q8N587 486 aa9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 ZSCAN4Q8NAM6 433 aaPredicted RBP9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 LY6G5BQ8NDX9 201 aa9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 TMEM185AQ8NFB2 350 aa9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 DCTN5Q9BTE1 182 aa9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 NEK6Q9HC98 313 aa9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 HMG20AQ9NP66 347 aa9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 FOXJ3Q9UPW0 622 aa9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 LRRC42Q9Y546 428 aa9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 AUP1Q9Y679 476 aa9.35□□□□□ -0.91
TNFRSF1A-208ENST00000536194 ZNF737O75373 536 aa9.34□□□□□ -0.91
TNFRSF1A-208ENST00000536194 CYB5AP00167 134 aa9.34□□□□□ -0.91
TNFRSF1A-208ENST00000536194 MAS1P04201 325 aa9.34□□□□□ -0.91
TNFRSF1A-208ENST00000536194 MMP9P14780 707 aa9.34□□□□□ -0.91
TNFRSF1A-208ENST00000536194 PRKACAP17612 351 aa9.34□□□□□ -0.91
TNFRSF1A-208ENST00000536194 MAPK3P27361 379 aaPredicted RBP9.34□□□□□ -0.91
TNFRSF1A-208ENST00000536194 ZNF93P35789 620 aaPredicted RBP9.34□□□□□ -0.91
TNFRSF1A-208ENST00000536194 SNU13P55769 128 aaKnown RBP9.34□□□□□ -0.91
TNFRSF1A-208ENST00000536194 COL10A1Q03692 680 aa9.34□□□□□ -0.91
TNFRSF1A-208ENST00000536194 ZNF146Q15072 292 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms