RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 ZNF724A8MTY0 619 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 F8VVB4 439 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 F8VWA3 439 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 CA11O75493 328 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 SLC10A1Q14973 349 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 SLC9A3R2Q15599 337 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 NSUN5P2Q63ZY6 315 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 ELP2Q6IA86 826 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 RPUSD3Q6P087 351 aaKnown RBP11.57□□□□□ -0.56
VPS33B-202ENST00000535906 NUFIP2Q7Z417 695 aaKnown RBP11.57□□□□□ -0.56
VPS33B-202ENST00000535906 EMG1Q92979 244 aaKnown RBP11.57□□□□□ -0.56
VPS33B-202ENST00000535906 APH1AQ96BI3 265 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 PIK3IP1Q96FE7 263 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 CPNE2Q96FN4 548 aaPredicted RBP11.57□□□□□ -0.56
VPS33B-202ENST00000535906 DEFB127Q9H1M4 99 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 TSPAN4O14817 238 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 KCNAB3O43448 404 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 GALR2O43603 387 aaPredicted RBP11.56□□□□□ -0.56
VPS33B-202ENST00000535906 PPA1Q15181 289 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 RNFT1Q5M7Z0 435 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 PLCXD3Q63HM9 321 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 RTL6Q6ICC9 239 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 UNQ6126/PRO20091Q6UXV3 157 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 PIP4P1Q86T03 277 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 ACKR4Q9NPB9 350 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 ZNF816-ZNF321PA0A0X1KG74 233 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 C5orf49A4QMS7 147 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 GEMIN2O14893 280 aaKnown RBP11.56□□□□□ -0.56
VPS33B-202ENST00000535906 SFTPBP07988 381 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 CD46P15529 392 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 FUT6P51993 359 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 PDZK1IP1Q13113 114 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 PIGYQ3MUY2 71 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 CHRFAM7AQ494W8 412 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 ZSCAN4Q8NAM6 433 aaPredicted RBP11.56□□□□□ -0.56
VPS33B-202ENST00000535906 MICU1Q9BPX6 476 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 RNF122Q9H9V4 155 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 PARD6AQ9NPB6 346 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 PRR13Q9NZ81 148 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 ATPIF1Q9UII2 106 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 SLC7A11Q9UPY5 501 aa11.56□□□□□ -0.56
VPS33B-202ENST00000535906 ZNF850A8MQ14 1090 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 H0YIZ8 118 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 ADAP1O75689 374 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 LYL1P12980 280 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 RPS2P15880 293 aaKnown RBP11.55□□□□□ -0.56
VPS33B-202ENST00000535906 GLRA1P23415 457 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 RRADP55042 308 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 NAAAQ02083 359 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 RNPS1Q15287 305 aaKnown RBP11.55□□□□□ -0.56
VPS33B-202ENST00000535906 SURF2Q15527 256 aaPredicted RBP11.55□□□□□ -0.56
VPS33B-202ENST00000535906 ANKRD55Q3KP44 614 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 BRICD5Q6PL45 260 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 TMPRSS7Q7RTY8 843 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 CALHM1Q8IU99 346 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 DEFB124Q8NES8 71 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 AK3Q9UIJ7 227 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 ARHGAP21Q5T5U3 1957 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 ACTL6AO96019 429 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 APOC3P02656 99 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 CD79AP11912 226 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 TPT1P13693 172 aaKnown RBP11.55□□□□□ -0.56
VPS33B-202ENST00000535906 ARG2P78540 354 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 SRSF6Q13247 344 aaKnown RBP11.55□□□□□ -0.56
VPS33B-202ENST00000535906 STK11Q15831 433 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 ZNF766Q5HY98 468 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 PRSS54Q6PEW0 395 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 CCDC36Q8IYA8 594 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 FBXL14Q8N1E6 418 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 SLC30A7Q8NEW0 376 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 OR51F2Q8NH61 342 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 RRNAD1Q96FB5 475 aaKnown RBP11.55□□□□□ -0.56
VPS33B-202ENST00000535906 SULT4A1Q9BR01 284 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 REPIN1Q9BWE0 567 aaKnown RBP11.55□□□□□ -0.56
VPS33B-202ENST00000535906 PIGMQ9H3S5 423 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 HSF4Q9ULV5 492 aa11.55□□□□□ -0.56
VPS33B-202ENST00000535906 SPAARA0A1B0GVQ0 90 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 MPTX1A8MV57 137 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 FGF16O43320 207 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 ATF4P18848 351 aaPredicted RBP11.54□□□□□ -0.56
VPS33B-202ENST00000535906 CHATP28329 748 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 RAB1AP62820 205 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 ZNF273Q14593 569 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 VASH2Q86V25 355 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 MCEMP1Q8IX19 187 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 OSR2Q8N2R0 312 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 OR10AD1Q8NGE0 317 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 OR56B2PQ8NGI1 322 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 DYRK2Q92630 601 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 ZNF552Q9H707 407 aaPredicted RBP11.54□□□□□ -0.56
VPS33B-202ENST00000535906 CRIM1Q9NZV1 1036 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 PRSS50Q9UI38 385 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 SPENQ96T58 3664 aaKnown RBP11.54□□□□□ -0.56
VPS33B-202ENST00000535906 CDRT15L2A8MXV6 281 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 PDCD1Q15116 288 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 PLEKHN1Q494U1 663 aaPredicted RBP11.54□□□□□ -0.56
VPS33B-202ENST00000535906 UQCC3Q6UW78 93 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 BAP18Q8IXM2 172 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 BATF2Q8N1L9 274 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 WDYHV1Q96HA8 205 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms