RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 NECAP1Q8NC96 275 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 PAPOLGQ9BWT3 736 aaKnown RBP13.94□□□□□ -0.18
MCF2L-232ENST00000535094 WNT16Q9UBV4 365 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 RBMXL2O75526 392 aaKnown RBP13.94□□□□□ -0.18
MCF2L-232ENST00000535094 MSR1P21757 451 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 MALLQ13021 153 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 ARL6IP1Q15041 203 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 SSX9Q7RTT3 188 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 ZNF383Q8NA42 475 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 OR5L2Q8NGL0 311 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 OCSTAMPQ9BR26 566 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 ZNF286AQ9HBT8 521 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 FTCDNL1E5RQL4 147 aa13.93□□□□□ -0.18
MCF2L-232ENST00000535094 GEMIN2O14893 280 aaKnown RBP13.93□□□□□ -0.18
MCF2L-232ENST00000535094 SNCAP37840 140 aa13.93□□□□□ -0.18
MCF2L-232ENST00000535094 HTR5AP47898 357 aa13.93□□□□□ -0.18
MCF2L-232ENST00000535094 GRB2P62993 217 aaKnown RBP13.93□□□□□ -0.18
MCF2L-232ENST00000535094 ZNF239Q16600 458 aaKnown RBP13.93□□□□□ -0.18
MCF2L-232ENST00000535094 HIST2H3PS2Q5TEC6 136 aa13.93□□□□□ -0.18
MCF2L-232ENST00000535094 OR51H1Q8NH63 302 aa13.93□□□□□ -0.18
MCF2L-232ENST00000535094 CPNE4Q96A23 557 aaPredicted RBP13.93□□□□□ -0.18
MCF2L-232ENST00000535094 TMPRSS5Q9H3S3 457 aa13.93□□□□□ -0.18
MCF2L-232ENST00000535094 MOB1AQ9H8S9 216 aa13.93□□□□□ -0.18
MCF2L-232ENST00000535094 ST3GAL6Q9Y274 331 aa13.93□□□□□ -0.18
MCF2L-232ENST00000535094 ICE1Q9Y2F5 2266 aa13.93□□□□□ -0.18
MCF2L-232ENST00000535094 A0A1W2PQD3 144 aa13.93□□□□□ -0.18
MCF2L-232ENST00000535094 ZNF814B7Z6K7 855 aa13.93□□□□□ -0.18
MCF2L-232ENST00000535094 ALDH3B1P43353 468 aa13.93□□□□□ -0.18
MCF2L-232ENST00000535094 SMAD4Q13485 552 aaKnown RBP13.93□□□□□ -0.18
MCF2L-232ENST00000535094 OR2B11Q5JQS5 317 aa13.93□□□□□ -0.18
MCF2L-232ENST00000535094 UBALD1Q8TB05 177 aa13.93□□□□□ -0.18
MCF2L-232ENST00000535094 GFOD1Q9NXC2 390 aa13.93□□□□□ -0.18
MCF2L-232ENST00000535094 OSGIN2Q9Y236 505 aa13.93□□□□□ -0.18
MCF2L-232ENST00000535094 IGHV3-64DA0A0J9YX35 117 aa13.93□□□□□ -0.18
MCF2L-232ENST00000535094 OR5C1Q8NGR4 320 aa13.93□□□□□ -0.18
MCF2L-232ENST00000535094 UCN2Q96RP3 112 aa13.93□□□□□ -0.18
MCF2L-232ENST00000535094 SLC2A9Q9NRM0 540 aa13.93□□□□□ -0.18
MCF2L-232ENST00000535094 A0A1W2PR80 420 aa13.92□□□□□ -0.18
MCF2L-232ENST00000535094 QRFPP83859 136 aa13.92□□□□□ -0.18
MCF2L-232ENST00000535094 SRSF4Q08170 494 aaKnown RBP13.92□□□□□ -0.18
MCF2L-232ENST00000535094 OR2T2Q6IF00 324 aa13.92□□□□□ -0.18
MCF2L-232ENST00000535094 NAA60Q9H7X0 242 aa13.92□□□□□ -0.18
MCF2L-232ENST00000535094 C5orf52A6NGY3 159 aa13.92□□□□□ -0.18
MCF2L-232ENST00000535094 GPR137BO60478 399 aa13.92□□□□□ -0.18
MCF2L-232ENST00000535094 ZFAND5O76080 213 aa13.92□□□□□ -0.18
MCF2L-232ENST00000535094 ZNF429Q86V71 674 aa13.92□□□□□ -0.18
MCF2L-232ENST00000535094 CMTM1Q8IZ96 169 aa13.92□□□□□ -0.18
MCF2L-232ENST00000535094 CCDC71LQ8N9Z2 235 aa13.92□□□□□ -0.18
MCF2L-232ENST00000535094 SGCZQ96LD1 299 aa13.92□□□□□ -0.18
MCF2L-232ENST00000535094 ALKBH3Q96Q83 286 aaPredicted RBP13.92□□□□□ -0.18
MCF2L-232ENST00000535094 SUCNR1Q9BXA5 334 aa13.92□□□□□ -0.18
MCF2L-232ENST00000535094 OR51M1Q9H341 326 aa13.92□□□□□ -0.18
MCF2L-232ENST00000535094 CRLF2Q9HC73 371 aa13.92□□□□□ -0.18
MCF2L-232ENST00000535094 TRBV6-7A0A0A0MS04 114 aa13.92□□□□□ -0.18
MCF2L-232ENST00000535094 MSTNO14793 375 aa13.92□□□□□ -0.18
MCF2L-232ENST00000535094 EIF1BO60739 113 aaKnown RBP13.92□□□□□ -0.18
MCF2L-232ENST00000535094 SCAF4O95104 1147 aaKnown RBP13.92□□□□□ -0.18
MCF2L-232ENST00000535094 EIF1P41567 113 aaKnown RBP13.92□□□□□ -0.18
MCF2L-232ENST00000535094 FASLGP48023 281 aa13.92□□□□□ -0.18
MCF2L-232ENST00000535094 UBAC2Q8NBM4 344 aa13.92□□□□□ -0.18
MCF2L-232ENST00000535094 MR1Q95460 341 aa13.92□□□□□ -0.18
MCF2L-232ENST00000535094 CFHR5Q9BXR6 569 aa13.92□□□□□ -0.18
MCF2L-232ENST00000535094 P4HTMQ9NXG6 502 aa13.92□□□□□ -0.18
MCF2L-232ENST00000535094 NKX2-6A6NCS4 301 aa13.91□□□□□ -0.18
MCF2L-232ENST00000535094 H3BQ15 152 aa13.91□□□□□ -0.18
MCF2L-232ENST00000535094 HMGB3O15347 200 aaKnown RBP13.91□□□□□ -0.18
MCF2L-232ENST00000535094 SCRG1O75711 98 aa13.91□□□□□ -0.18
MCF2L-232ENST00000535094 CD5P06127 495 aa13.91□□□□□ -0.18
MCF2L-232ENST00000535094 IFI6P09912 130 aa13.91□□□□□ -0.18
MCF2L-232ENST00000535094 C5orf24Q7Z6I8 188 aa13.91□□□□□ -0.18
MCF2L-232ENST00000535094 THNSL2Q86YJ6 484 aa13.91□□□□□ -0.18
MCF2L-232ENST00000535094 SCGB1C1Q8TD33 95 aa13.91□□□□□ -0.18
MCF2L-232ENST00000535094 UNKLQ9H9P5 680 aaKnown RBP13.91□□□□□ -0.18
MCF2L-232ENST00000535094 DHRS3O75911 302 aa13.91□□□□□ -0.18
MCF2L-232ENST00000535094 SLC34A2O95436 690 aa13.91□□□□□ -0.18
MCF2L-232ENST00000535094 IFNA5P01569 189 aa13.91□□□□□ -0.18
MCF2L-232ENST00000535094 B4GALT1P15291 398 aa13.91□□□□□ -0.18
MCF2L-232ENST00000535094 EFNA3P52797 238 aa13.91□□□□□ -0.18
MCF2L-232ENST00000535094 DCDP81605 110 aaKnown RBP13.91□□□□□ -0.18
MCF2L-232ENST00000535094 OXGR1Q96P68 337 aa13.91□□□□□ -0.18
MCF2L-232ENST00000535094 ZNF385AQ96PM9 386 aaKnown RBP13.91□□□□□ -0.18
MCF2L-232ENST00000535094 KLF2Q9Y5W3 355 aaPredicted RBP13.91□□□□□ -0.18
MCF2L-232ENST00000535094 WSB1Q9Y6I7 421 aa13.91□□□□□ -0.18
MCF2L-232ENST00000535094 CTSDP07339 412 aaPredicted RBP13.91□□□□□ -0.18
MCF2L-232ENST00000535094 LBX1P52954 281 aa13.91□□□□□ -0.18
MCF2L-232ENST00000535094 CCL20P78556 96 aa13.91□□□□□ -0.18
MCF2L-232ENST00000535094 GGACTQ9BVM4 153 aa13.91□□□□□ -0.18
MCF2L-232ENST00000535094 GPR61Q9BZJ8 451 aa13.91□□□□□ -0.18
MCF2L-232ENST00000535094 C8orf33Q9H7E9 229 aaPredicted RBP13.91□□□□□ -0.18
MCF2L-232ENST00000535094 WFDC1Q9HC57 220 aa13.91□□□□□ -0.18
MCF2L-232ENST00000535094 PRRC2CQ9Y520 2896 aaKnown RBP13.9□□□□□ -0.18
MCF2L-232ENST00000535094 A0A087WZY1 265 aa13.9□□□□□ -0.18
MCF2L-232ENST00000535094 PHOX2AO14813 284 aa13.9□□□□□ -0.18
MCF2L-232ENST00000535094 ATP6V0CP27449 155 aa13.9□□□□□ -0.18
MCF2L-232ENST00000535094 RBP2P50120 134 aa13.9□□□□□ -0.18
MCF2L-232ENST00000535094 FGF8P55075 233 aaPredicted RBP13.9□□□□□ -0.18
MCF2L-232ENST00000535094 OR2C3Q8N628 320 aa13.9□□□□□ -0.18
MCF2L-232ENST00000535094 RAB39BQ96DA2 213 aa13.9□□□□□ -0.18
MCF2L-232ENST00000535094 MEGF10Q96KG7 1140 aa13.9□□□□□ -0.18
MCF2L-232ENST00000535094 EYSQ5T1H1 3165 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms