RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 OR4D9Q8NGE8 314 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 OR9A1PQ8NGU1 263 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 OR10J5Q8NHC4 309 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 FLVCR1-AS1Q8TAF5 88 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 GPX8Q8TED1 209 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 APH1BQ8WW43 257 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 CREB3L1Q96BA8 519 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 ZBED6CLQ96FA7 236 aaPredicted RBP2.67□□□□□ -1.98
USP48-215ENST00000534705 AMDHD1Q96NU7 426 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 COL21A1Q96P44 957 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 TRNT1Q96Q11 434 aaKnown RBP2.67□□□□□ -1.98
USP48-215ENST00000534705 SLC38A2Q96QD8 506 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 OR2M2Q96R28 347 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 COPS8Q99627 209 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 TMED9Q9BVK6 235 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 MND1Q9BWT6 205 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 CDCA4Q9BXL8 241 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 PINK1Q9BXM7 581 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 NLNQ9BYT8 704 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 STRADBQ9C0K7 418 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 ING2Q9H160 280 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 METTL9Q9H1A3 318 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 OR52A5Q9H2C5 316 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 PRORYQ9H606 182 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 WDR55Q9H6Y2 383 aaPredicted RBP2.67□□□□□ -1.98
USP48-215ENST00000534705 ASB8Q9H765 288 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 ZNF665Q9H7R5 613 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 GEMIN7Q9H840 131 aaKnown RBP2.67□□□□□ -1.98
USP48-215ENST00000534705 RDH14Q9HBH5 336 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 THUMPD1Q9NXG2 353 aaKnown RBP2.67□□□□□ -1.98
USP48-215ENST00000534705 SCP2D1Q9UJQ7 156 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 IKZF2Q9UKS7 526 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 MGAT4AQ9UM21 535 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 BAIAP2Q9UQB8 552 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 GSTK1Q9Y2Q3 226 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 CARHSP1Q9Y2V2 147 aaKnown RBP2.67□□□□□ -1.98
USP48-215ENST00000534705 DHRS7Q9Y394 339 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 MYO18BQ8IUG5 2567 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 MPDZO75970 2070 aa2.67□□□□□ -1.98
USP48-215ENST00000534705 NCOA6Q14686 2063 aaPredicted RBP2.67□□□□□ -1.98
USP48-215ENST00000534705 YLPM1P49750 1951 aaKnown RBP2.67□□□□□ -1.98
USP48-215ENST00000534705 MYO7BQ6PIF6 2116 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 UBR5O95071 2799 aaPredicted RBP2.66□□□□□ -1.98
USP48-215ENST00000534705 TRAV25A0A0B4J276 109 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 IGHV3-16A0A0C4DH30 117 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 IGHV5-51A0A0C4DH38 117 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 A0A1B0GV90 55 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 RFPL4AA6NLU0 287 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 TMEM210A6NLX4 147 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 RFPL4AL1F8VTS6 287 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 H3BMH7 237 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 GPR171O14626 319 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 ITGB1BP1O14713 200 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 SIGLEC5O15389 551 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 HCRTR1O43613 425 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 PRKYO43930 277 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 HPGDSO60760 199 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 EEDO75530 441 aaKnown RBP2.66□□□□□ -1.98
USP48-215ENST00000534705 SC5DO75845 299 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 TNFSF15O95150 251 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 GADD45GO95257 159 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 WISP3O95389 354 aaPredicted RBP2.66□□□□□ -1.98
USP48-215ENST00000534705 SEMG1P04279 462 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 FCER2P06734 321 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 KRTAP1-4P0C5Y4 121 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 UGT2B7P16662 529 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 MAGP20916 626 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 PTNP21246 168 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 IDSP22304 550 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 UCP1P25874 307 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 CRABP1P29762 137 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 PEBP1P30086 187 aaKnown RBP2.66□□□□□ -1.98
USP48-215ENST00000534705 SLC6A1P30531 599 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 MAP2K4P45985 399 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 CAPZBP47756 277 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 GABRA4P48169 554 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 KPNA2P52292 529 aaKnown RBP2.66□□□□□ -1.98
USP48-215ENST00000534705 EMX2Q04743 252 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 EIF3IQ13347 325 aaKnown RBP2.66□□□□□ -1.98
USP48-215ENST00000534705 CAPRIN1Q14444 709 aaKnown RBP2.66□□□□□ -1.98
USP48-215ENST00000534705 PRPSAP1Q14558 356 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 MAD2L1BPQ15013 274 aaPredicted RBP2.66□□□□□ -1.98
USP48-215ENST00000534705 TGIF1Q15583 401 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 USF2Q15853 346 aaPredicted RBP2.66□□□□□ -1.98
USP48-215ENST00000534705 IMPG1Q17R60 797 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 TIMM50Q3ZCQ8 353 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 HIKESHIQ53FT3 197 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 PAN3Q58A45 887 aaKnown RBP2.66□□□□□ -1.98
USP48-215ENST00000534705 ACER2Q5QJU3 275 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 C9orf66Q5T8R8 295 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 DMKNQ6E0U4 476 aaPredicted RBP2.66□□□□□ -1.98
USP48-215ENST00000534705 FAM71F2Q6NXP2 309 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 UQCC3Q6UW78 93 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 HSDL2Q6YN16 418 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 CERS6Q6ZMG9 384 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 H2BFWTQ7Z2G1 175 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 TIPARPQ7Z3E1 657 aaKnown RBP2.66□□□□□ -1.98
USP48-215ENST00000534705 C5orf24Q7Z6I8 188 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 TMEM135Q86UB9 458 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 TMEM17Q86X19 198 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms