RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 SSR1P43307 286 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 SEC61GP60059 68 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 TGFBR3Q03167 851 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 PRR4Q16378 134 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 NNATQ16517 81 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 HADHQ16836 314 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 KLHL38Q2WGJ6 581 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 CYHR1Q6ZMK1 362 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 CTAGE6Q86UF2 777 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 MYPOPQ86VE0 399 aaPredicted RBP3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 LRRC6Q86X45 466 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 CALHM3Q86XJ0 350 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 CDH26Q8IXH8 852 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 ZNF567Q8N184 647 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 RHOXF1Q8NHV9 184 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 MS4A6EQ96DS6 147 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 MS4A14Q96JA4 679 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 RNF157Q96PX1 679 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 RANBP3Q9H6Z4 567 aaPredicted RBP3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 MRPL47Q9HD33 250 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 MED11Q9P086 117 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 OR1A1Q9P1Q5 309 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 OR5V1Q9UGF6 321 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 PIGLQ9Y2B2 252 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 TSSC4Q9Y5U2 329 aaPredicted RBP3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 IGHV1-69-2A0A0G2JMI3 117 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 HELTA6NFD8 242 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 DHRS7CA6NNS2 312 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 LYPD3O95274 346 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 SMC2O95347 1197 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 HSMCR30P0CW71 290 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 CPN2P22792 545 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 GCAP28676 217 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 LEPP41159 167 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 MAP3K8P41279 467 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 CRYBB2P43320 205 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 KIR2DS2P43631 304 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 MEOX2P50222 304 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 DAP3P51398 398 aaKnown RBP3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 NDUFA8P51970 172 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 ACTR3P61158 418 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 REEP5Q00765 189 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 PNOCQ13519 176 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 TRIP13Q15645 432 aaPredicted RBP3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 GSG1Q2KHT4 349 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 TRIM16LQ309B1 348 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 KCTD21Q4G0X4 260 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 TTMPQ5BVD1 217 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 ACSBG2Q5FVE4 666 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 UQCC3Q6UW78 93 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 BAIAP2L2Q6UXY1 529 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 SPATA12Q7Z6I5 190 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 SLC22A9Q8IVM8 553 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 SLC35F2Q8IXU6 374 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 ZNF615Q8N8J6 731 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 OR2L5Q8NG80 312 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 OR7G1Q8NGA0 311 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 OR52K1Q8NGK4 314 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 OR13F1Q8NGS4 319 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 OR56B4Q8NH76 319 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 RNF138Q8WVD3 245 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 EFHD2Q96C19 240 aaPredicted RBP3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 LRRC45Q96CN5 670 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 TUBGCP3Q96CW5 907 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 CCDC126Q96EE4 140 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 SNF8Q96H20 258 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 MAPKAP1Q9BPZ7 522 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 TBL1YQ9BQ87 522 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 AIF1LQ9BQI0 150 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 ZNF649Q9BS31 505 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 PAXXQ9BUH6 204 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 SPNS1Q9H2V7 528 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 YY1AP1Q9H869 796 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 SDHAF3Q9NRP4 125 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 NUDT15Q9NV35 164 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 PHF11Q9UIL8 331 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 PRPF19Q9UMS4 504 aaKnown RBP3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 CFL2Q9Y281 166 aa3.17□□□□□ -1.9
ECHDC1-223ENST00000534442 LPAP08519 4548 aa3.16□□□□□ -1.9
ECHDC1-223ENST00000534442 IGLV8-61A0A075B6I0 122 aa3.16□□□□□ -1.9
ECHDC1-223ENST00000534442 PCP4L1A6NKN8 68 aa3.16□□□□□ -1.9
ECHDC1-223ENST00000534442 C17orf51A8MQB3 221 aa3.16□□□□□ -1.9
ECHDC1-223ENST00000534442 TRDCB7Z8K6 153 aa3.16□□□□□ -1.9
ECHDC1-223ENST00000534442 C9JVG2 144 aa3.16□□□□□ -1.9
ECHDC1-223ENST00000534442 OR10H3O60404 316 aa3.16□□□□□ -1.9
ECHDC1-223ENST00000534442 EEDO75530 441 aaKnown RBP3.16□□□□□ -1.9
ECHDC1-223ENST00000534442 DIRAS1O95057 198 aa3.16□□□□□ -1.9
ECHDC1-223ENST00000534442 GPR75O95800 540 aa3.16□□□□□ -1.9
ECHDC1-223ENST00000534442 CECR9P0C854 216 aa3.16□□□□□ -1.9
ECHDC1-223ENST00000534442 VDAC1P21796 283 aa3.16□□□□□ -1.9
ECHDC1-223ENST00000534442 RPS3P23396 243 aaKnown RBP eCLIP3.16□□□□□ -1.9
ECHDC1-223ENST00000534442 CALCRP30988 508 aa3.16□□□□□ -1.9
ECHDC1-223ENST00000534442 FGF9P31371 208 aaPredicted RBP3.16□□□□□ -1.9
ECHDC1-223ENST00000534442 RPL13AP40429 203 aaKnown RBP3.16□□□□□ -1.9
ECHDC1-223ENST00000534442 TTPAP49638 278 aa3.16□□□□□ -1.9
ECHDC1-223ENST00000534442 HNRNPA3P51991 378 aaKnown RBP3.16□□□□□ -1.9
ECHDC1-223ENST00000534442 ATP1B3P54709 279 aa3.16□□□□□ -1.9
ECHDC1-223ENST00000534442 RPL23AP62750 156 aaKnown RBP3.16□□□□□ -1.9
ECHDC1-223ENST00000534442 CCL8P80075 99 aa3.16□□□□□ -1.9
ECHDC1-223ENST00000534442 TGM3Q08188 693 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms