RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 SHBGP04278 402 aa8□□□□□ -1.13
CSDE1-215ENST00000533818 CDK2P24941 298 aa8□□□□□ -1.13
CSDE1-215ENST00000533818 ACKR3P25106 362 aa8□□□□□ -1.13
CSDE1-215ENST00000533818 RAB9AP51151 201 aa8□□□□□ -1.13
CSDE1-215ENST00000533818 ST3GAL3Q11203 375 aa8□□□□□ -1.13
CSDE1-215ENST00000533818 CYP51A1Q16850 503 aa8□□□□□ -1.13
CSDE1-215ENST00000533818 KRT71Q3SY84 523 aa8□□□□□ -1.13
CSDE1-215ENST00000533818 TRAPPC6BQ86SZ2 158 aa8□□□□□ -1.13
CSDE1-215ENST00000533818 KIRREL3Q8IZU9 778 aa8□□□□□ -1.13
CSDE1-215ENST00000533818 DEFB125Q8N687 156 aa8□□□□□ -1.13
CSDE1-215ENST00000533818 TPRX1Q8N7U7 411 aa8□□□□□ -1.13
CSDE1-215ENST00000533818 RASSF5Q8WWW0 418 aa8□□□□□ -1.13
CSDE1-215ENST00000533818 TOLLIPQ9H0E2 274 aa8□□□□□ -1.13
CSDE1-215ENST00000533818 TPSG1Q9NRR2 321 aa8□□□□□ -1.13
CSDE1-215ENST00000533818 PNPOQ9NVS9 261 aa8□□□□□ -1.13
CSDE1-215ENST00000533818 MRPL22Q9NWU5 206 aaKnown RBP8□□□□□ -1.13
CSDE1-215ENST00000533818 NDUFB2O95178 105 aa7.99□□□□□ -1.13
CSDE1-215ENST00000533818 ATF4P18848 351 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-215ENST00000533818 CD34P28906 385 aa7.99□□□□□ -1.13
CSDE1-215ENST00000533818 CX3CR1P49238 355 aa7.99□□□□□ -1.13
CSDE1-215ENST00000533818 CD81P60033 236 aa7.99□□□□□ -1.13
CSDE1-215ENST00000533818 ZNF45Q02386 682 aa7.99□□□□□ -1.13
CSDE1-215ENST00000533818 LCN12Q6JVE5 192 aa7.99□□□□□ -1.13
CSDE1-215ENST00000533818 LYPD4Q6UWN0 246 aa7.99□□□□□ -1.13
CSDE1-215ENST00000533818 FAM57BQ71RH2 274 aa7.99□□□□□ -1.13
CSDE1-215ENST00000533818 DCXRQ7Z4W1 244 aa7.99□□□□□ -1.13
CSDE1-215ENST00000533818 OR8H2Q8N162 312 aa7.99□□□□□ -1.13
CSDE1-215ENST00000533818 ZNF645Q8N7E2 425 aa7.99□□□□□ -1.13
CSDE1-215ENST00000533818 Q8N9W7 124 aa7.99□□□□□ -1.13
CSDE1-215ENST00000533818 OR52L1Q8NGH7 329 aa7.99□□□□□ -1.13
CSDE1-215ENST00000533818 FLYWCH2Q96CP2 140 aaKnown RBP7.99□□□□□ -1.13
CSDE1-215ENST00000533818 SORT1Q99523 831 aa7.99□□□□□ -1.13
CSDE1-215ENST00000533818 HSPB9Q9BQS6 159 aa7.99□□□□□ -1.13
CSDE1-215ENST00000533818 SRD5A3Q9H8P0 318 aa7.99□□□□□ -1.13
CSDE1-215ENST00000533818 RPRD1BQ9NQG5 326 aaKnown RBP7.99□□□□□ -1.13
CSDE1-215ENST00000533818 FBXO7Q9Y3I1 522 aa7.99□□□□□ -1.13
CSDE1-215ENST00000533818 A0A1W2PPI3 338 aa7.98□□□□□ -1.13
CSDE1-215ENST00000533818 MPZL2O60487 215 aa7.98□□□□□ -1.13
CSDE1-215ENST00000533818 TXNDC12O95881 172 aa7.98□□□□□ -1.13
CSDE1-215ENST00000533818 RENP00797 406 aa7.98□□□□□ -1.13
CSDE1-215ENST00000533818 IGLV1-40P01703 118 aa7.98□□□□□ -1.13
CSDE1-215ENST00000533818 INAFM2P0DMQ5 153 aa7.98□□□□□ -1.13
CSDE1-215ENST00000533818 PPIFP30405 207 aaKnown RBP7.98□□□□□ -1.13
CSDE1-215ENST00000533818 SLC1A6P48664 564 aa7.98□□□□□ -1.13
CSDE1-215ENST00000533818 RPS6KA3P51812 740 aa7.98□□□□□ -1.13
CSDE1-215ENST00000533818 CEACAM21Q3KPI0 293 aa7.98□□□□□ -1.13
CSDE1-215ENST00000533818 CEP78Q5JTW2 689 aa7.98□□□□□ -1.13
CSDE1-215ENST00000533818 HEPN1Q6WQI6 88 aa7.98□□□□□ -1.13
CSDE1-215ENST00000533818 ZBTB46Q86UZ6 589 aa7.98□□□□□ -1.13
CSDE1-215ENST00000533818 BATF2Q8N1L9 274 aa7.98□□□□□ -1.13
CSDE1-215ENST00000533818 GVQW1Q8N7I0 195 aa7.98□□□□□ -1.13
CSDE1-215ENST00000533818 EPS8L3Q8TE67 593 aaKnown RBP7.98□□□□□ -1.13
CSDE1-215ENST00000533818 ZBTB9Q96C00 473 aa7.98□□□□□ -1.13
CSDE1-215ENST00000533818 SLAMF6Q96DU3 332 aa7.98□□□□□ -1.13
CSDE1-215ENST00000533818 PKNOX2Q96KN3 472 aa7.98□□□□□ -1.13
CSDE1-215ENST00000533818 NMNAT3Q96T66 252 aa7.98□□□□□ -1.13
CSDE1-215ENST00000533818 RASL11BQ9BPW5 248 aa7.98□□□□□ -1.13
CSDE1-215ENST00000533818 NEURL2Q9BR09 285 aa7.98□□□□□ -1.13
CSDE1-215ENST00000533818 OR10A2Q9H208 303 aa7.98□□□□□ -1.13
CSDE1-215ENST00000533818 ZNF319Q9P2F9 582 aa7.98□□□□□ -1.13
CSDE1-215ENST00000533818 TRBV5-3A0A0A0MS03 114 aa7.97□□□□□ -1.13
CSDE1-215ENST00000533818 C16orf90A8MZG2 172 aa7.97□□□□□ -1.13
CSDE1-215ENST00000533818 NOS1APO75052 506 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-215ENST00000533818 HSPB1P04792 205 aaKnown RBP7.97□□□□□ -1.13
CSDE1-215ENST00000533818 LGALS1P09382 135 aaKnown RBP7.97□□□□□ -1.13
CSDE1-215ENST00000533818 IFNA8P32881 189 aa7.97□□□□□ -1.13
CSDE1-215ENST00000533818 SOX6P35712 828 aa7.97□□□□□ -1.13
CSDE1-215ENST00000533818 SLC15A1P46059 708 aa7.97□□□□□ -1.13
CSDE1-215ENST00000533818 CRYBA2P53672 197 aa7.97□□□□□ -1.13
CSDE1-215ENST00000533818 PAGE3Q5JUK9 113 aa7.97□□□□□ -1.13
CSDE1-215ENST00000533818 ZNF730Q6ZMV8 503 aa7.97□□□□□ -1.13
CSDE1-215ENST00000533818 DPY19L2P2Q6ZN68 376 aa7.97□□□□□ -1.13
CSDE1-215ENST00000533818 RNF113BQ8IZP6 322 aaKnown RBP7.97□□□□□ -1.13
CSDE1-215ENST00000533818 OR5A2Q8NGI9 324 aa7.97□□□□□ -1.13
CSDE1-215ENST00000533818 EAF1Q96JC9 268 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-215ENST00000533818 SNX22Q96L94 193 aa7.97□□□□□ -1.13
CSDE1-215ENST00000533818 GPX7Q96SL4 187 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-215ENST00000533818 TINAGL1Q9GZM7 467 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-215ENST00000533818 GAL3ST2Q9H3Q3 398 aa7.97□□□□□ -1.13
CSDE1-215ENST00000533818 RGCCQ9H4X1 137 aa7.97□□□□□ -1.13
CSDE1-215ENST00000533818 VIPAS39Q9H9C1 493 aa7.97□□□□□ -1.13
CSDE1-215ENST00000533818 PPCSQ9HAB8 311 aa7.97□□□□□ -1.13
CSDE1-215ENST00000533818 PLEKHA1Q9HB21 404 aa7.97□□□□□ -1.13
CSDE1-215ENST00000533818 BRD7Q9NPI1 651 aa7.97□□□□□ -1.13
CSDE1-215ENST00000533818 ETAA1Q9NY74 926 aa7.97□□□□□ -1.13
CSDE1-215ENST00000533818 HAO1Q9UJM8 370 aa7.97□□□□□ -1.13
CSDE1-215ENST00000533818 ZNF580Q9UK33 172 aa7.97□□□□□ -1.13
CSDE1-215ENST00000533818 BAG5Q9UL15 447 aa7.97□□□□□ -1.13
CSDE1-215ENST00000533818 UBE2J1Q9Y385 318 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-215ENST00000533818 TMEM82A0PJX8 343 aa7.96□□□□□ -1.14
CSDE1-215ENST00000533818 IZUMO1RA6ND01 250 aa7.96□□□□□ -1.14
CSDE1-215ENST00000533818 OR5B21A6NL26 309 aa7.96□□□□□ -1.14
CSDE1-215ENST00000533818 G3V318 75 aa7.96□□□□□ -1.14
CSDE1-215ENST00000533818 ARPC1BO15143 372 aaKnown RBP7.96□□□□□ -1.14
CSDE1-215ENST00000533818 HSD11B1P28845 292 aa7.96□□□□□ -1.14
CSDE1-215ENST00000533818 RAB7AP51149 207 aa7.96□□□□□ -1.14
CSDE1-215ENST00000533818 TCTAP57738 103 aa7.96□□□□□ -1.14
CSDE1-215ENST00000533818 ZNF121P58317 390 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-215ENST00000533818 EBI3Q14213 229 aa7.96□□□□□ -1.14
CSDE1-215ENST00000533818 DIAPH2-AS1Q14236 149 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms