RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 IGKV1-27A0A075B6S5 117 aa19.11■□□□□ 0.65
SMPD1-209ENST00000533196 H3BSH0 61 aa19.11■□□□□ 0.65
SMPD1-209ENST00000533196 TIMM23O14925 209 aa19.11■□□□□ 0.65
SMPD1-209ENST00000533196 SLC16A6O15403 523 aa19.11■□□□□ 0.65
SMPD1-209ENST00000533196 MPZL2O60487 215 aa19.11■□□□□ 0.65
SMPD1-209ENST00000533196 PRKACBP22694 351 aa19.11■□□□□ 0.65
SMPD1-209ENST00000533196 PROK1P58294 105 aa19.11■□□□□ 0.65
SMPD1-209ENST00000533196 COL10A1Q03692 680 aa19.11■□□□□ 0.65
SMPD1-209ENST00000533196 ENTHD1Q8IYW4 607 aa19.11■□□□□ 0.65
SMPD1-209ENST00000533196 CBR4Q8N4T8 237 aa19.11■□□□□ 0.65
SMPD1-209ENST00000533196 ACBD7Q8N6N7 88 aa19.11■□□□□ 0.65
SMPD1-209ENST00000533196 OR4M1Q8NGD0 313 aa19.11■□□□□ 0.65
SMPD1-209ENST00000533196 ZNF737O75373 536 aa19.1■□□□□ 0.65
SMPD1-209ENST00000533196 CYB5AP00167 134 aa19.1■□□□□ 0.65
SMPD1-209ENST00000533196 RBP4P02753 201 aa19.1■□□□□ 0.65
SMPD1-209ENST00000533196 RPSAP08865 295 aaKnown RBP19.1■□□□□ 0.65
SMPD1-209ENST00000533196 HTR1AP08908 422 aa19.1■□□□□ 0.65
SMPD1-209ENST00000533196 ACTA2P62736 377 aa19.1■□□□□ 0.65
SMPD1-209ENST00000533196 ACTG2P63267 376 aa19.1■□□□□ 0.65
SMPD1-209ENST00000533196 ZIK1Q3SY52 487 aaPredicted RBP19.1■□□□□ 0.65
SMPD1-209ENST00000533196 SLC25A26Q70HW3 274 aa19.1■□□□□ 0.65
SMPD1-209ENST00000533196 RDH10Q8IZV5 341 aa19.1■□□□□ 0.65
SMPD1-209ENST00000533196 BATF2Q8N1L9 274 aa19.1■□□□□ 0.65
SMPD1-209ENST00000533196 ASCC1Q8N9N2 400 aaKnown RBP19.1■□□□□ 0.65
SMPD1-209ENST00000533196 SNX22Q96L94 193 aa19.1■□□□□ 0.65
SMPD1-209ENST00000533196 MBOAT4Q96T53 435 aa19.1■□□□□ 0.65
SMPD1-209ENST00000533196 C9orf16Q9BUW7 83 aa19.1■□□□□ 0.65
SMPD1-209ENST00000533196 FRRS1LQ9P0K9 344 aa19.1■□□□□ 0.65
SMPD1-209ENST00000533196 GMPPBQ9Y5P6 360 aa19.1■□□□□ 0.65
SMPD1-209ENST00000533196 C17orf98A8MV24 154 aa19.09■□□□□ 0.65
SMPD1-209ENST00000533196 OR12D2P58182 307 aa19.09■□□□□ 0.65
SMPD1-209ENST00000533196 ZNF273Q14593 569 aa19.09■□□□□ 0.65
SMPD1-209ENST00000533196 SLAMF9Q96A28 289 aa19.09■□□□□ 0.65
SMPD1-209ENST00000533196 SPSB1Q96BD6 273 aa19.09■□□□□ 0.65
SMPD1-209ENST00000533196 ADAT3Q96EY9 351 aaPredicted RBP19.09■□□□□ 0.65
SMPD1-209ENST00000533196 AJUBAQ96IF1 538 aa19.09■□□□□ 0.65
SMPD1-209ENST00000533196 Q96MT0 163 aa19.09■□□□□ 0.65
SMPD1-209ENST00000533196 SSX3Q99909 188 aa19.09■□□□□ 0.65
SMPD1-209ENST00000533196 HHLA2Q9UM44 414 aa19.09■□□□□ 0.65
SMPD1-209ENST00000533196 F8VVB4 439 aa19.08■□□□□ 0.64
SMPD1-209ENST00000533196 F8VWA3 439 aa19.08■□□□□ 0.64
SMPD1-209ENST00000533196 H3BUX3 64 aa19.08■□□□□ 0.64
SMPD1-209ENST00000533196 M0QZ24 198 aa19.08■□□□□ 0.64
SMPD1-209ENST00000533196 CCL3L1P16619 93 aa19.08■□□□□ 0.64
SMPD1-209ENST00000533196 ZNF20P17024 532 aa19.08■□□□□ 0.64
SMPD1-209ENST00000533196 GABRB1P18505 474 aa19.08■□□□□ 0.64
SMPD1-209ENST00000533196 ATF1P18846 271 aa19.08■□□□□ 0.64
SMPD1-209ENST00000533196 LGALS4P56470 323 aa19.08■□□□□ 0.64
SMPD1-209ENST00000533196 MEF2CQ06413 473 aaPredicted RBP19.08■□□□□ 0.64
SMPD1-209ENST00000533196 LRRC75BQ2VPJ9 315 aa19.08■□□□□ 0.64
SMPD1-209ENST00000533196 LHFPL2Q6ZUX7 228 aa19.08■□□□□ 0.64
SMPD1-209ENST00000533196 GDPD3Q7L5L3 318 aa19.08■□□□□ 0.64
SMPD1-209ENST00000533196 OR8H2Q8N162 312 aa19.08■□□□□ 0.64
SMPD1-209ENST00000533196 EMG1Q92979 244 aaKnown RBP19.08■□□□□ 0.64
SMPD1-209ENST00000533196 RAB18Q9NP72 206 aa19.08■□□□□ 0.64
SMPD1-209ENST00000533196 TRBV2A0A0J9YWF9 115 aa19.07■□□□□ 0.64
SMPD1-209ENST00000533196 AZGP1P25311 298 aaKnown RBP19.07■□□□□ 0.64
SMPD1-209ENST00000533196 DLX6P56179 175 aa19.07■□□□□ 0.64
SMPD1-209ENST00000533196 MTCP1P56278 107 aa19.07■□□□□ 0.64
SMPD1-209ENST00000533196 NANOS3P60323 173 aaKnown RBP19.07■□□□□ 0.64
SMPD1-209ENST00000533196 SRSF4Q08170 494 aaKnown RBP19.07■□□□□ 0.64
SMPD1-209ENST00000533196 MRPL28Q13084 256 aaKnown RBP19.07■□□□□ 0.64
SMPD1-209ENST00000533196 SYS1Q8N2H4 156 aa19.07■□□□□ 0.64
SMPD1-209ENST00000533196 DTX3Q8N9I9 347 aa19.07■□□□□ 0.64
SMPD1-209ENST00000533196 LGALS12Q96DT0 336 aa19.07■□□□□ 0.64
SMPD1-209ENST00000533196 NEK6Q9HC98 313 aa19.07■□□□□ 0.64
SMPD1-209ENST00000533196 INPP5EQ9NRR6 644 aa19.07■□□□□ 0.64
SMPD1-209ENST00000533196 IGKV1-9A0A0C4DH69 117 aa19.06■□□□□ 0.64
SMPD1-209ENST00000533196 FADS2O95864 444 aaKnown RBP19.06■□□□□ 0.64
SMPD1-209ENST00000533196 ZNF728P0DKX0 622 aa19.06■□□□□ 0.64
SMPD1-209ENST00000533196 ALKBH1Q13686 389 aaKnown RBP19.06■□□□□ 0.64
SMPD1-209ENST00000533196 SPIN3Q5JUX0 258 aa19.06■□□□□ 0.64
SMPD1-209ENST00000533196 LIAT1Q6ZQX7 453 aa19.06■□□□□ 0.64
SMPD1-209ENST00000533196 OR13D1Q8NGV5 346 aa19.06■□□□□ 0.64
SMPD1-209ENST00000533196 PPP1R35Q8TAP8 253 aa19.06■□□□□ 0.64
SMPD1-209ENST00000533196 C17orf50Q8WW18 174 aa19.06■□□□□ 0.64
SMPD1-209ENST00000533196 FGGYQ96C11 551 aa19.06■□□□□ 0.64
SMPD1-209ENST00000533196 PELI1Q96FA3 418 aa19.06■□□□□ 0.64
SMPD1-209ENST00000533196 C4orf36Q96KX1 117 aa19.06■□□□□ 0.64
SMPD1-209ENST00000533196 OPALINQ96PE5 141 aa19.06■□□□□ 0.64
SMPD1-209ENST00000533196 S100A14Q9HCY8 104 aa19.06■□□□□ 0.64
SMPD1-209ENST00000533196 FBLN5Q9UBX5 448 aa19.06■□□□□ 0.64
SMPD1-209ENST00000533196 GLS2Q9UI32 602 aa19.06■□□□□ 0.64
SMPD1-209ENST00000533196 TBL2Q9Y4P3 447 aaKnown RBP19.06■□□□□ 0.64
SMPD1-209ENST00000533196 hADV38S2A0JD32 116 aa19.05■□□□□ 0.64
SMPD1-209ENST00000533196 OR4C45A6NMZ5 311 aa19.05■□□□□ 0.64
SMPD1-209ENST00000533196 J3QLW9 94 aa19.05■□□□□ 0.64
SMPD1-209ENST00000533196 HAND1O96004 215 aa19.05■□□□□ 0.64
SMPD1-209ENST00000533196 MT-ND2P03891 347 aa19.05■□□□□ 0.64
SMPD1-209ENST00000533196 DBTP11182 482 aaKnown RBP19.05■□□□□ 0.64
SMPD1-209ENST00000533196 PIPP12273 146 aaPredicted RBP19.05■□□□□ 0.64
SMPD1-209ENST00000533196 ZNF19P17023 458 aa19.05■□□□□ 0.64
SMPD1-209ENST00000533196 PEX2P28328 305 aa19.05■□□□□ 0.64
SMPD1-209ENST00000533196 EDDM3BP56851 147 aa19.05■□□□□ 0.64
SMPD1-209ENST00000533196 KRTAP10-3P60369 221 aa19.05■□□□□ 0.64
SMPD1-209ENST00000533196 ZNF91Q05481 1191 aa19.05■□□□□ 0.64
SMPD1-209ENST00000533196 GALEQ14376 348 aa19.05■□□□□ 0.64
SMPD1-209ENST00000533196 ZNF146Q15072 292 aa19.05■□□□□ 0.64
SMPD1-209ENST00000533196 FAM58AQ8N1B3 248 aa19.05■□□□□ 0.64
SMPD1-209ENST00000533196 RHOXF1Q8NHV9 184 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms