RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 GUCA2BQ16661 112 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 NKPD1Q17RQ9 610 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 CEACAM16Q2WEN9 425 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 VWA1Q6PCB0 445 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 DPPA2Q7Z7J5 298 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 WDFY1Q8IWB7 410 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 BAP18Q8IXM2 172 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 ZNF843Q8N446 348 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 ACBD4Q8NC06 268 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 NAXEQ8NCW5 288 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 SLC26A10Q8NG04 563 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 OR4D6Q8NGJ1 314 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 RNF141Q8WVD5 230 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 FOXB1Q99853 325 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 UQCC2Q9BRT2 126 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 SEC61A2Q9H9S3 476 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 CHMP1AQ9HD42 196 aaPredicted RBP12.64□□□□□ -0.39
NR1H3-231ENST00000529540 CYTL1Q9NRR1 136 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 Q9UFV3 132 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 SPENQ96T58 3664 aaKnown RBP12.64□□□□□ -0.39
NR1H3-231ENST00000529540 COL6A6A6NMZ7 2263 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 EPG5Q9HCE0 2579 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 SNAPINO95295 136 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 CGAP01215 116 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 HEXAP06865 529 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 PVALBP20472 110 aaPredicted RBP12.64□□□□□ -0.39
NR1H3-231ENST00000529540 ARHGDIBP52566 201 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 MRPL49Q13405 166 aaKnown RBP12.64□□□□□ -0.39
NR1H3-231ENST00000529540 KCNMB1Q16558 191 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 C4orf17Q53FE4 359 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 OR10K2Q6IF99 312 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 HOGA1Q86XE5 327 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 C1orf162Q8NEQ5 155 aaPredicted RBP12.64□□□□□ -0.39
NR1H3-231ENST00000529540 DMBX1Q8NFW5 382 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 GAL3ST1Q99999 423 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 USB1Q9BQ65 265 aaKnown RBP12.64□□□□□ -0.39
NR1H3-231ENST00000529540 SEC11CQ9BY50 192 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 BIN3Q9NQY0 253 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 TMEM38BQ9NVV0 291 aa12.64□□□□□ -0.39
NR1H3-231ENST00000529540 FBXO9Q9UK97 447 aaPredicted RBP12.64□□□□□ -0.39
NR1H3-231ENST00000529540 PHF3Q92576 2039 aaKnown RBP12.63□□□□□ -0.39
NR1H3-231ENST00000529540 DOCK7Q96N67 2140 aa12.63□□□□□ -0.39
NR1H3-231ENST00000529540 CEACAM18A8MTB9 384 aa12.63□□□□□ -0.39
NR1H3-231ENST00000529540 FAM25EA8MYX2 175 aa12.63□□□□□ -0.39
NR1H3-231ENST00000529540 CSN2P05814 226 aa12.63□□□□□ -0.39
NR1H3-231ENST00000529540 CHRNB4P30926 498 aa12.63□□□□□ -0.39
NR1H3-231ENST00000529540 CBX5P45973 191 aa12.63□□□□□ -0.39
NR1H3-231ENST00000529540 RAB13P51153 203 aa12.63□□□□□ -0.39
NR1H3-231ENST00000529540 ACTBL2Q562R1 376 aa12.63□□□□□ -0.39
NR1H3-231ENST00000529540 PHYHD1Q5SRE7 291 aa12.63□□□□□ -0.39
NR1H3-231ENST00000529540 OTPQ5XKR4 325 aa12.63□□□□□ -0.39
NR1H3-231ENST00000529540 AWAT2Q6E213 333 aa12.63□□□□□ -0.39
NR1H3-231ENST00000529540 FOXN4Q96NZ1 517 aa12.63□□□□□ -0.39
NR1H3-231ENST00000529540 IFT22Q9H7X7 185 aa12.63□□□□□ -0.39
NR1H3-231ENST00000529540 ZMAT3Q9HA38 289 aaKnown RBP12.63□□□□□ -0.39
NR1H3-231ENST00000529540 COA4Q9NYJ1 87 aa12.63□□□□□ -0.39
NR1H3-231ENST00000529540 ELOVL5Q9NYP7 299 aa12.63□□□□□ -0.39
NR1H3-231ENST00000529540 PRSS50Q9UI38 385 aa12.63□□□□□ -0.39
NR1H3-231ENST00000529540 POLR1DQ9Y2S0 133 aa12.63□□□□□ -0.39
NR1H3-231ENST00000529540 ZGRF1Q86YA3 2104 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 IGKV1D-43A0A0B4J1Z2 117 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 IGHV3-9P01782 118 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 ERCC1P07992 297 aaPredicted RBP12.62□□□□□ -0.39
NR1H3-231ENST00000529540 PGAM2P15259 253 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 COX5AP20674 150 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 BMP5P22003 454 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 SERPINF1P36955 418 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 PCBD1P61457 104 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 PJVKQ0ZLH3 352 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 UNC119Q13432 240 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 NKAPLQ5M9Q1 402 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 FAM27BQ5VT28 67 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 UNQ6126/PRO20091Q6UXV3 157 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 SSX8Q7RTT4 187 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 C17orf78Q8N4C9 275 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 SLC22A24Q8N4F4 322 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 ADAD2Q8NCV1 583 aaKnown RBP12.62□□□□□ -0.39
NR1H3-231ENST00000529540 OR1M1Q8NGA1 313 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 PRR7Q8TB68 274 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 ST7LQ8TDW4 575 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 NANOS1Q8WY41 292 aaKnown RBP12.62□□□□□ -0.39
NR1H3-231ENST00000529540 DCUN1D4Q92564 292 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 BOD1Q96IK1 185 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 RNF126Q9BV68 326 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 CNTD2Q9H8S5 307 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 FN3KRPQ9HA64 309 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 ZFP57Q9NU63 452 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 MED12LQ86YW9 2145 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 NBEAQ8NFP9 2946 aa12.62□□□□□ -0.39
NR1H3-231ENST00000529540 PRRC2CQ9Y520 2896 aaKnown RBP12.62□□□□□ -0.39
NR1H3-231ENST00000529540 EEF1E1-BLOC1S5C9J1V9 151 aa12.61□□□□□ -0.39
NR1H3-231ENST00000529540 F8W036 122 aa12.61□□□□□ -0.39
NR1H3-231ENST00000529540 IFNA4P05014 189 aa12.61□□□□□ -0.39
NR1H3-231ENST00000529540 FAM157CP0CG43 387 aa12.61□□□□□ -0.39
NR1H3-231ENST00000529540 HOXC12P31275 282 aa12.61□□□□□ -0.39
NR1H3-231ENST00000529540 HRH1P35367 487 aa12.61□□□□□ -0.39
NR1H3-231ENST00000529540 MMP16P51512 607 aa12.61□□□□□ -0.39
NR1H3-231ENST00000529540 BLOC1S1P78537 153 aa12.61□□□□□ -0.39
NR1H3-231ENST00000529540 MST1LQ2TV78 715 aa12.61□□□□□ -0.39
NR1H3-231ENST00000529540 VAX1Q5SQQ9 334 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms