RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 OR4C45A6NMZ5 311 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 LINC00473A8K010 186 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 RRHO14718 337 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 PHYHO14832 338 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 KCNAB3O43448 404 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 SPRY1O43609 319 aaPredicted RBP3.6□□□□□ -1.83
CD44-226ENST00000527889 PLPP2O43688 288 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 NDUFS6O75380 124 aaKnown RBP3.6□□□□□ -1.83
CD44-226ENST00000527889 SULT1C4O75897 302 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 KRT33AO76009 404 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 TACSTD2P09758 323 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 H2BFMP0C1H6 154 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 PATE4P0C8F1 98 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 MMP9P14780 707 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 B4GALT1P15291 398 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 SRMP19623 302 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 ANOS1P23352 680 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 SDC2P34741 201 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 OPRL1P41146 370 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 CDC34P49427 236 aaPredicted RBP3.6□□□□□ -1.83
CD44-226ENST00000527889 GNG10P50151 68 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 PRKXP51817 358 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 ZNF133P52736 654 aaPredicted RBP3.6□□□□□ -1.83
CD44-226ENST00000527889 RIDAP52758 137 aaKnown RBP3.6□□□□□ -1.83
CD44-226ENST00000527889 FOXG1P55316 489 aaPredicted RBP3.6□□□□□ -1.83
CD44-226ENST00000527889 UCP2P55851 309 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 TMPRSS3P57727 454 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 KRTAP10-2P60368 255 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 SPCS3P61009 180 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 RPS11P62280 158 aaKnown RBP eCLIP3.6□□□□□ -1.83
CD44-226ENST00000527889 HNRNPA0Q13151 305 aaKnown RBP3.6□□□□□ -1.83
CD44-226ENST00000527889 GPR50Q13585 617 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 ENDOGQ14249 297 aaKnown RBP3.6□□□□□ -1.83
CD44-226ENST00000527889 SMCO1Q147U7 214 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 TAF13Q15543 124 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 PCK2Q16822 640 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 DGUOKQ16854 277 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 CEACAM16Q2WEN9 425 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 WDR38Q5JTN6 314 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 TEX30Q5JUR7 227 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 TSPO2Q5TGU0 170 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 C9orf135Q5VTT2 229 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 RPL22L1Q6P5R6 122 aaKnown RBP3.6□□□□□ -1.83
CD44-226ENST00000527889 TMEM65Q6PI78 240 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 CD200R1LQ6Q8B3 271 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 IGFL3Q6UXB1 125 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 GDPGP1Q6ZNW5 385 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 Q6ZNX1 250 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 COLCA1Q6ZS62 124 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 Q6ZS92 163 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 FOXL2NBQ6ZUU3 175 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 P4HA3Q7Z4N8 544 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 CEACAM19Q7Z692 300 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 TBC1D26Q86UD7 250 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 RDH10Q8IZV5 341 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 PRSS35Q8N3Z0 413 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 OR2AJ1Q8NGZ0 328 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 OR2G2Q8NGZ5 317 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 OR10AC1Q8NH08 325 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 FGFBP3Q8TAT2 258 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 FNDC8Q8TC99 324 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 RPS4Y2Q8TD47 263 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 RNF128Q8TEB7 428 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 ASB17Q8WXJ9 295 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 SLC7A6Q92536 515 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 GHSRQ92847 366 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 NABP1Q96AH0 204 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 TMEM45BQ96B21 275 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 SLAMF6Q96DU3 332 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 C4orf45Q96LM5 186 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 KCTD7Q96MP8 289 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 BARHL1Q9BZE3 327 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 DNTTIP1Q9H147 329 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 PPIL3Q9H2H8 161 aaKnown RBP3.6□□□□□ -1.83
CD44-226ENST00000527889 SLCO5A1Q9H2Y9 848 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 OR51B6Q9H340 312 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 B3GAT2Q9NPZ5 323 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 ABCB10Q9NRK6 738 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 CCDC59Q9P031 241 aaKnown RBP3.6□□□□□ -1.83
CD44-226ENST00000527889 CLCF1Q9UBD9 225 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 SLC22A13Q9Y226 551 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 GSTK1Q9Y2Q3 226 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 LSM4Q9Y4Z0 139 aaKnown RBP3.6□□□□□ -1.83
CD44-226ENST00000527889 STAB1Q9NY15 2570 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 PDZD2O15018 2839 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 NOTCH1P46531 2555 aa3.59□□□□□ -1.83
CD44-226ENST00000527889 CELSR1Q9NYQ6 3014 aa3.59□□□□□ -1.83
CD44-226ENST00000527889 FAM240BA0A1B0GVZ2 78 aa3.59□□□□□ -1.83
CD44-226ENST00000527889 A0A1W2PPV4 95 aa3.59□□□□□ -1.83
CD44-226ENST00000527889 WIPF3A6NGB9 483 aa3.59□□□□□ -1.83
CD44-226ENST00000527889 ANKRD61A6NGH8 418 aa3.59□□□□□ -1.83
CD44-226ENST00000527889 HSPB2A8KAH6 182 aa3.59□□□□□ -1.83
CD44-226ENST00000527889 ZNF724A8MTY0 619 aa3.59□□□□□ -1.83
CD44-226ENST00000527889 ZNF878C9JN71 531 aa3.59□□□□□ -1.83
CD44-226ENST00000527889 ZNF587BE7ETH6 402 aa3.59□□□□□ -1.83
CD44-226ENST00000527889 LOC110117498-PIK3R3F6TDL0 507 aa3.59□□□□□ -1.83
CD44-226ENST00000527889 CASKO14936 926 aa3.59□□□□□ -1.83
CD44-226ENST00000527889 RER1O15258 196 aa3.59□□□□□ -1.83
CD44-226ENST00000527889 LMX1BO60663 402 aa3.59□□□□□ -1.83
CD44-226ENST00000527889 MRPL33O75394 65 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms