RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 ALDOBP05062 364 aa18.89■□□□□ 0.61
CPSF1-202ENST00000527827 ANXA8P13928 327 aa18.89■□□□□ 0.61
CPSF1-202ENST00000527827 ACTA2P62736 377 aa18.89■□□□□ 0.61
CPSF1-202ENST00000527827 ACTG2P63267 376 aa18.89■□□□□ 0.61
CPSF1-202ENST00000527827 ACTC1P68032 377 aa18.89■□□□□ 0.61
CPSF1-202ENST00000527827 ACTA1P68133 377 aa18.89■□□□□ 0.61
CPSF1-202ENST00000527827 SLC34A1Q06495 639 aa18.89■□□□□ 0.61
CPSF1-202ENST00000527827 TCTEX1D4Q5JR98 221 aa18.89■□□□□ 0.61
CPSF1-202ENST00000527827 BCL2L15Q5TBC7 163 aa18.89■□□□□ 0.61
CPSF1-202ENST00000527827 MINOS1Q5TGZ0 78 aa18.89■□□□□ 0.61
CPSF1-202ENST00000527827 ZNF322Q6U7Q0 402 aaPredicted RBP18.89■□□□□ 0.61
CPSF1-202ENST00000527827 GDPD3Q7L5L3 318 aa18.89■□□□□ 0.61
CPSF1-202ENST00000527827 OR8H2Q8N162 312 aa18.89■□□□□ 0.61
CPSF1-202ENST00000527827 TEX12Q9BXU0 123 aa18.89■□□□□ 0.61
CPSF1-202ENST00000527827 MTCH1Q9NZJ7 389 aa18.89■□□□□ 0.61
CPSF1-202ENST00000527827 OR52A1Q9UKL2 312 aa18.89■□□□□ 0.61
CPSF1-202ENST00000527827 MINOS1-NBL1R4GNA1 71 aa18.89■□□□□ 0.61
CPSF1-202ENST00000527827 TMEM82A0PJX8 343 aa18.88■□□□□ 0.61
CPSF1-202ENST00000527827 DHRS7CA6NNS2 312 aa18.88■□□□□ 0.61
CPSF1-202ENST00000527827 CXCR4P61073 352 aa18.88■□□□□ 0.61
CPSF1-202ENST00000527827 MEF2CQ06413 473 aaPredicted RBP18.88■□□□□ 0.61
CPSF1-202ENST00000527827 PLEKHG7Q6ZR37 379 aa18.88■□□□□ 0.61
CPSF1-202ENST00000527827 TRMT10AQ8TBZ6 339 aaKnown RBP18.88■□□□□ 0.61
CPSF1-202ENST00000527827 CNN2Q99439 309 aaKnown RBP18.88■□□□□ 0.61
CPSF1-202ENST00000527827 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.88■□□□□ 0.613e-9■□□□□ 10.2
CPSF1-202ENST00000527827 IGHV2-26A0A0B4J1V2 119 aa18.87■□□□□ 0.61
CPSF1-202ENST00000527827 AZGP1P25311 298 aaKnown RBP18.87■□□□□ 0.61
CPSF1-202ENST00000527827 GYS2P54840 703 aa18.87■□□□□ 0.61
CPSF1-202ENST00000527827 GNGT1P63211 74 aa18.87■□□□□ 0.61
CPSF1-202ENST00000527827 BCDIN3DQ7Z5W3 292 aaKnown RBP18.87■□□□□ 0.61
CPSF1-202ENST00000527827 SNX22Q96L94 193 aa18.87■□□□□ 0.61
CPSF1-202ENST00000527827 CADM1Q9BY67 442 aaKnown RBP18.87■□□□□ 0.61
CPSF1-202ENST00000527827 SESN1Q9Y6P5 492 aa18.87■□□□□ 0.61
CPSF1-202ENST00000527827 IGKV1-27A0A075B6S5 117 aa18.86■□□□□ 0.61
CPSF1-202ENST00000527827 FAM230AA0A1W2PPH8 454 aa18.86■□□□□ 0.61
CPSF1-202ENST00000527827 PRKYO43930 277 aa18.86■□□□□ 0.61
CPSF1-202ENST00000527827 PF4V1P10720 104 aa18.86■□□□□ 0.61
CPSF1-202ENST00000527827 CCL1P22362 96 aa18.86■□□□□ 0.61
CPSF1-202ENST00000527827 CRISP1P54107 249 aa18.86■□□□□ 0.61
CPSF1-202ENST00000527827 EDDM3AQ14507 147 aa18.86■□□□□ 0.61
CPSF1-202ENST00000527827 C11orf87Q6NUJ2 197 aa18.86■□□□□ 0.61
CPSF1-202ENST00000527827 ZNF676Q8N7Q3 588 aa18.86■□□□□ 0.61
CPSF1-202ENST00000527827 TPRX1Q8N7U7 411 aa18.86■□□□□ 0.61
CPSF1-202ENST00000527827 NDNFQ8TB73 568 aa18.86■□□□□ 0.61
CPSF1-202ENST00000527827 CEP19Q96LK0 163 aa18.86■□□□□ 0.61
CPSF1-202ENST00000527827 MRM2Q9UI43 246 aaKnown RBP18.86■□□□□ 0.61
CPSF1-202ENST00000527827 SNX5Q9Y5X3 404 aa18.86■□□□□ 0.61
CPSF1-202ENST00000527827 LINC00312Q9Y6C7 94 aa18.86■□□□□ 0.61
CPSF1-202ENST00000527827 hADV38S2A0JD32 116 aa18.85■□□□□ 0.61
CPSF1-202ENST00000527827 AQP12BA6NM10 295 aa18.85■□□□□ 0.61
CPSF1-202ENST00000527827 T-ENOLP0DO92 83 aa18.85■□□□□ 0.61
CPSF1-202ENST00000527827 UBE2V2Q15819 145 aa18.85■□□□□ 0.61
CPSF1-202ENST00000527827 CCDC121Q6ZUS5 278 aa18.85■□□□□ 0.61
CPSF1-202ENST00000527827 AQP12AQ8IXF9 295 aa18.85■□□□□ 0.61
CPSF1-202ENST00000527827 SLC35F2Q8IXU6 374 aa18.85■□□□□ 0.61
CPSF1-202ENST00000527827 OR52N4Q8NGI2 321 aa18.85■□□□□ 0.61
CPSF1-202ENST00000527827 SLAMF9Q96A28 289 aa18.85■□□□□ 0.61
CPSF1-202ENST00000527827 TMEM133Q9H2Q1 129 aa18.85■□□□□ 0.61
CPSF1-202ENST00000527827 ADGRL4Q9HBW9 690 aa18.85■□□□□ 0.61
CPSF1-202ENST00000527827 SLC7A11Q9UPY5 501 aa18.85■□□□□ 0.61
CPSF1-202ENST00000527827 MMP23AO75900 390 aa18.84■□□□□ 0.61
CPSF1-202ENST00000527827 INMTO95050 263 aa18.84■□□□□ 0.61
CPSF1-202ENST00000527827 IGHA1P01876 353 aa18.84■□□□□ 0.61
CPSF1-202ENST00000527827 KRTAP10-11P60412 298 aa18.84■□□□□ 0.61
CPSF1-202ENST00000527827 MEPCEQ7L2J0 689 aaKnown RBP18.84■□□□□ 0.61
CPSF1-202ENST00000527827 CENPVQ7Z7K6 275 aaPredicted RBP18.84■□□□□ 0.61
CPSF1-202ENST00000527827 OR4P4Q8NGL7 312 aa18.84■□□□□ 0.61
CPSF1-202ENST00000527827 CLEC7AQ9BXN2 247 aa18.84■□□□□ 0.61
CPSF1-202ENST00000527827 IL36RNQ9UBH0 155 aa18.84■□□□□ 0.61
CPSF1-202ENST00000527827 TSSC4Q9Y5U2 329 aaPredicted RBP18.84■□□□□ 0.61
CPSF1-202ENST00000527827 WI2-2373I1.2A0A1W2PRP0 233 aa18.83■□□□□ 0.6
CPSF1-202ENST00000527827 TCRBV4S1A1TA0A5B7 111 aa18.83■□□□□ 0.6
CPSF1-202ENST00000527827 M0R129 80 aa18.83■□□□□ 0.6
CPSF1-202ENST00000527827 DNAJC8O75937 253 aaPredicted RBP18.83■□□□□ 0.6
CPSF1-202ENST00000527827 PF4P02776 101 aa18.83■□□□□ 0.6
CPSF1-202ENST00000527827 CALB2P22676 271 aa18.83■□□□□ 0.6
CPSF1-202ENST00000527827 ACTR3P61158 418 aa18.83■□□□□ 0.6
CPSF1-202ENST00000527827 SLC35A2P78381 396 aa18.83■□□□□ 0.6
CPSF1-202ENST00000527827 PTGES3Q15185 160 aaKnown RBP18.83■□□□□ 0.6
CPSF1-202ENST00000527827 C16orf82Q7Z2V1 217 aa18.83■□□□□ 0.6
CPSF1-202ENST00000527827 EGFL6Q8IUX8 553 aa18.83■□□□□ 0.6
CPSF1-202ENST00000527827 MYDGFQ969H8 173 aa18.83■□□□□ 0.6
CPSF1-202ENST00000527827 RCC1LQ96I51 464 aaKnown RBP18.83■□□□□ 0.6
CPSF1-202ENST00000527827 MNTQ99583 582 aa18.83■□□□□ 0.6
CPSF1-202ENST00000527827 CHST6Q9GZX3 395 aa18.83■□□□□ 0.6
CPSF1-202ENST00000527827 SEBOXQ9HB31 216 aaPredicted RBP18.83■□□□□ 0.6
CPSF1-202ENST00000527827 PAPOLBQ9NRJ5 636 aaKnown RBP18.83■□□□□ 0.6
CPSF1-202ENST00000527827 CLN6Q9NWW5 311 aa18.83■□□□□ 0.6
CPSF1-202ENST00000527827 KIAA2026Q5HYC2 2103 aa18.82■□□□□ 0.6
CPSF1-202ENST00000527827 RYR3Q15413 4870 aa18.82■□□□□ 0.6
CPSF1-202ENST00000527827 H3BSH0 61 aa18.82■□□□□ 0.6
CPSF1-202ENST00000527827 ATP8B1O43520 1251 aa18.82■□□□□ 0.6
CPSF1-202ENST00000527827 PSPNO60542 156 aa18.82■□□□□ 0.6
CPSF1-202ENST00000527827 HAND1O96004 215 aa18.82■□□□□ 0.6
CPSF1-202ENST00000527827 CD24P25063 80 aa18.82■□□□□ 0.6
CPSF1-202ENST00000527827 HTR1DP28221 377 aa18.82■□□□□ 0.6
CPSF1-202ENST00000527827 GRK1Q15835 563 aa18.82■□□□□ 0.6
CPSF1-202ENST00000527827 ODF4Q2M2E3 257 aa18.82■□□□□ 0.6
CPSF1-202ENST00000527827 AADACL4Q5VUY2 407 aa18.82■□□□□ 0.6
CPSF1-202ENST00000527827 C10orf99Q6UWK7 81 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms