RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 PRSS44E7EML9 344 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 TNFSF12O43508 249 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 C1QBP02746 253 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 IL5P05113 134 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 FSTP19883 344 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 ZBTB25P24278 435 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 UCP2P55851 309 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 DHODHQ02127 395 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 RTL8BQ17RB0 113 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 KRBOX4Q5JUW0 171 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 UBALD1Q8TB05 177 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 PGLYRP3Q96LB9 341 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 PECRQ9BY49 303 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 RTN4RQ9BZR6 473 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 ZNF552Q9H707 407 aaPredicted RBP13.15□□□□□ -0.3
USP47-207ENST00000527733 CTDSPLO15194 276 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 SOCS1O15524 211 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 KCNJ3P48549 501 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 RFESDQ8TAC1 157 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 PIGMQ9H3S5 423 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 MSL2Q9HCI7 577 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 LAMP3Q9UQV4 416 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 MED12Q93074 2177 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 PPIHO43447 177 aaKnown RBP13.15□□□□□ -0.3
USP47-207ENST00000527733 ISG15P05161 165 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 AADACP22760 399 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 FPR2P25090 351 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 KLRB1Q12918 225 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 TRAT1Q6PIZ9 186 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 ZFP62Q8NB50 900 aaPredicted RBP13.15□□□□□ -0.3
USP47-207ENST00000527733 OR5AP2Q8NGF4 316 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 ZNF75AQ96N20 296 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 LINC00470Q9BZP3 86 aa13.15□□□□□ -0.3
USP47-207ENST00000527733 APOC3P02656 99 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 S100A9P06702 114 aaKnown RBP13.14□□□□□ -0.31
USP47-207ENST00000527733 ZNF708P17019 499 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 ZNF266Q14584 549 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 CD200R1LQ6Q8B3 271 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 SLC51BQ86UW2 128 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 OR13C8Q8NGS7 320 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 TMEM54Q969K7 222 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 TMEM45BQ96B21 275 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 SDSLQ96GA7 329 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 SAP30LQ9HAJ7 183 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 AQP7O14520 342 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 CBR1P16152 277 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 PSMB6P28072 239 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 CLINT1Q14677 625 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 RAB1CQ92928 201 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 SFXN3Q9BWM7 321 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 SUCNR1Q9BXA5 334 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 TRAV38-1A0A0B4J264 116 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 TSPAN4O14817 238 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 GEMIN2O14893 280 aaKnown RBP13.14□□□□□ -0.31
USP47-207ENST00000527733 COX5BP10606 129 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 ALDH3B1P43353 468 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 MPV17LQ2QL34 196 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 ATPAF1Q5TC12 328 aaPredicted RBP13.14□□□□□ -0.31
USP47-207ENST00000527733 LTBP2Q14767 1821 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 ADRA2CP18825 462 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 RAG2P55895 527 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 MOGAT3Q86VF5 341 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 TMEM217Q8N7C4 229 aa13.14□□□□□ -0.31
USP47-207ENST00000527733 MUC6Q6W4X9 2439 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 NUP210Q8TEM1 1887 aaPredicted RBP13.13□□□□□ -0.31
USP47-207ENST00000527733 ANKRD20A5PA0PJZ0 165 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 TMEM210A6NLX4 147 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 AGPAT2O15120 278 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 GSTZ1O43708 216 aaPredicted RBP13.13□□□□□ -0.31
USP47-207ENST00000527733 NXPH3O95157 252 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 TUBG1P23258 451 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 TUBG2Q9NRH3 451 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 FAM212BQ9NTI7 297 aaPredicted RBP13.13□□□□□ -0.31
USP47-207ENST00000527733 ERRFI1Q9UJM3 462 aaPredicted RBP13.13□□□□□ -0.31
USP47-207ENST00000527733 V9GYH0 126 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 ESCO2Q56NI9 601 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 ALKAL2Q6UX46 152 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 SSX9Q7RTT3 188 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 COMMD7Q86VX2 200 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 GVQW1Q8N7I0 195 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 ZMIZ1Q9ULJ6 1067 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 hADV38S2A0JD32 116 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 OR5H14A6NHG9 310 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 TRIM64BA6NI03 449 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 NPIPB7O75200 414 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 CNIH1O95406 144 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 TLE1Q04724 770 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 AKR1C1Q04828 323 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 GABRA6Q16445 453 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 LRRC75AQ8NAA5 344 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 PTX4Q96A99 478 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 WDR13Q9H1Z4 485 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 RNF7Q9UBF6 113 aa13.13□□□□□ -0.31
USP47-207ENST00000527733 ADAM20O43506 726 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 SPNP16150 400 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 C17orf107Q6ZR85 190 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 TMEM68Q96MH6 324 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 FAM206AQ9NX38 181 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 OR6C3Q9NZP0 311 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 BOLA1Q9Y3E2 137 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms