RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 NIPSNAP2O75323 286 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 CRTAPO75718 401 aaPredicted RBP1.61□□□□□ -2.15
COPB1-203ENST00000525214 OXTP01178 125 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 GIMD1P0DJR0 217 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 GABRG2P18507 467 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 PSMB6P28072 239 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 UGT2B10P36537 528 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 RBM34P42696 430 aaKnown RBP1.61□□□□□ -2.15
COPB1-203ENST00000525214 OR2B6P58173 313 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 MLF1P58340 268 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 KRTAP12-1P59990 96 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 RPS23P62266 143 aaKnown RBP1.61□□□□□ -2.15
COPB1-203ENST00000525214 SKP1P63208 163 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 IFFO1Q0D2I5 559 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 SLAMF1Q13291 335 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 PMS2P3Q13401 168 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 DYNC1I2Q13409 638 aaKnown RBP1.61□□□□□ -2.15
COPB1-203ENST00000525214 DGCR6Q14129 220 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 DMC1Q14565 340 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 BSXQ3C1V8 233 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 GCSAMLQ5JQS6 135 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 ACTL10Q5JWF8 245 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 FAM27D1Q5T7N8 215 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 PLEKHG7Q6ZR37 379 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 Q6ZS52 159 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 USP50Q70EL3 339 aaPredicted RBP1.61□□□□□ -2.15
COPB1-203ENST00000525214 SETD3Q86TU7 594 aaPredicted RBP1.61□□□□□ -2.15
COPB1-203ENST00000525214 LRRC6Q86X45 466 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 CRLF3Q8IUI8 442 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 SLC30A8Q8IWU4 369 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 NELFCDQ8IXH7 590 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 SELENOHQ8IZQ5 122 aaKnown RBP1.61□□□□□ -2.15
COPB1-203ENST00000525214 ZNF645Q8N7E2 425 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 CDRT4Q8N9R6 151 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 CYB561A3Q8NBI2 242 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 ACBD4Q8NC06 268 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 ZNF738Q8NE65 137 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 OR2Y1Q8NGV0 311 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 RORBQ92753 470 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 TNFRSF14Q92956 283 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 RNF145Q96MT1 663 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 RDH12Q96NR8 316 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 UQCC2Q9BRT2 126 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 C1orf50Q9BV19 199 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 SLIRPQ9GZT3 109 aaKnown RBP1.61□□□□□ -2.15
COPB1-203ENST00000525214 SRRQ9GZT4 340 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 ZNF442Q9H7R0 627 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 PLEKHA1Q9HB21 404 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 TMBIM4Q9HC24 238 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 RGS18Q9NS28 235 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 MS4A12Q9NXJ0 267 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 MAT2BQ9NZL9 334 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 RAB23Q9ULC3 237 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 ZNF257Q9Y2Q1 563 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 KLF12Q9Y4X4 402 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 PUS1Q9Y606 427 aaKnown RBP eCLIP1.61□□□□□ -2.15
COPB1-203ENST00000525214 URGCP-MRPS24S4R325 110 aa1.61□□□□□ -2.15
COPB1-203ENST00000525214 A0A0A6YYH2 397 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 TRAV8-4A0A0B4J246 113 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 A0A0J9YXV3 536 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 C1orf232A0A0U1RR37 186 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 A0A1W2PRG6 482 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 TVP23AA6NH52 213 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 A6NJ64 397 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 LINC01619G3V211 115 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 MKRN2OSH3BPM6 223 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 CLDN34H7C241 214 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 M0R1B8 84 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 TOR1AO14656 332 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 ITGB1BP1O14713 200 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 TAAR5O14804 337 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 TCAPO15273 167 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 P01737 135 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 S100A6P06703 90 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 MMP7P09237 267 aaPredicted RBP1.6□□□□□ -2.15
COPB1-203ENST00000525214 SLC35E2BP0CK96 405 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 SYT1P21579 422 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 CD40LGP29965 261 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 KDELR2P33947 212 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 MYCNOSP40205 109 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 UBE2E1P51965 193 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 PLTPP55058 493 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 UBE2KP61086 200 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 IFITM3Q01628 133 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 STX4Q12846 297 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 FLOT2Q14254 428 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 ZNF266Q14584 549 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 OR1Q1Q15612 314 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 TOMM34Q15785 309 aaPredicted RBP1.6□□□□□ -2.15
COPB1-203ENST00000525214 TMEM249Q2WGJ8 235 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 SYT6Q5T7P8 510 aaPredicted RBP1.6□□□□□ -2.15
COPB1-203ENST00000525214 PTRHD1Q6GMV3 140 aaKnown RBP1.6□□□□□ -2.15
COPB1-203ENST00000525214 AHSA2Q719I0 299 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 PLCZ1Q86YW0 608 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 SLC7A5P1Q8MH63 180 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 DNAAF3Q8N9W5 541 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 C19orf18Q8NEA5 215 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 OR51Q1Q8NH59 317 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 OR5AK3PQ8NH89 298 aa1.6□□□□□ -2.15
COPB1-203ENST00000525214 OR1S1Q8NH92 325 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms