RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 FGF11Q92914 225 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 FBXW5Q969U6 566 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 GLRX2Q9NS18 164 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 CYB5R1Q9UHQ9 305 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 PUS1Q9Y606 427 aaKnown RBP eCLIP11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 DOCK9Q9BZ29 2069 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 EXOSC2Q13868 293 aaKnown RBP11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 ZNF239Q16600 458 aaKnown RBP11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 ZDHHC22Q8N966 263 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 OR2G3Q8NGZ4 309 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 HGDQ93099 445 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 DHRS9Q9BPW9 319 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 PECRQ9BY49 303 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 LIN7CQ9NUP9 197 aaKnown RBP11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 MPC1Q9Y5U8 109 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 GPR31O00270 319 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 RAMP1O60894 148 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 ELLP55199 621 aaPredicted RBP11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 PSG4Q00888 419 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 HPSE2Q8WWQ2 592 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 PPP1R3EQ9H7J1 279 aa11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 PCDHGA9Q9Y5G4 932 aaKnown RBP11.47□□□□□ -0.57
PCDHGB1-201ENST00000523390 PCNTO95613 3336 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 CDIPTO14735 213 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 LMX1BO60663 402 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 HPNP05981 417 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 ACP1P24666 158 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 RAG2P55895 527 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 TMEM108Q6UXF1 575 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 OR5AP2Q8NGF4 316 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 S100PBPQ96BU1 408 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 S1PR3Q99500 378 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 DIDO1Q9BTC0 2240 aaKnown RBP11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 ATP6V1G2-DDX39BF2Z307 99 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 DFFBO76075 338 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 TNFRSF1AP19438 455 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 TAS2R30P59541 319 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 RAB11AP62491 216 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 SLC25A47Q6Q0C1 308 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 MDP1Q86V88 176 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 OR10X1Q8NGY0 326 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 ZNF519Q8TB69 540 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 EDARADDQ8WWZ3 215 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 GUCD1Q96NT3 240 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 CHST5Q9GZS9 411 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 FN3KRPQ9HA64 309 aa11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 SF3B6Q9Y3B4 125 aaKnown RBP11.46□□□□□ -0.57
PCDHGB1-201ENST00000523390 ZFHX2Q9C0A1 2572 aaPredicted RBP11.46□□□□□ -0.58
PCDHGB1-201ENST00000523390 A0A1W2PP11 408 aa11.46□□□□□ -0.58
PCDHGB1-201ENST00000523390 CHATP28329 748 aa11.46□□□□□ -0.58
PCDHGB1-201ENST00000523390 RPL35P42766 123 aaKnown RBP11.46□□□□□ -0.58
PCDHGB1-201ENST00000523390 KLF3P57682 345 aaPredicted RBP11.46□□□□□ -0.58
PCDHGB1-201ENST00000523390 RAB5BP61020 215 aa11.46□□□□□ -0.58
PCDHGB1-201ENST00000523390 ROM1Q03395 351 aa11.46□□□□□ -0.58
PCDHGB1-201ENST00000523390 ZNF816Q0VGE8 651 aaPredicted RBP11.46□□□□□ -0.58
PCDHGB1-201ENST00000523390 ZBTB37Q5TC79 503 aa11.46□□□□□ -0.58
PCDHGB1-201ENST00000523390 TSC2P49815 1807 aa11.46□□□□□ -0.58
PCDHGB1-201ENST00000523390 DEFB108AA8MXU0 73 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 MICBQ29980 383 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 SKA3Q8IX90 412 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 WDSUB1Q8N9V3 476 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 SFT2D1Q8WV19 159 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 TAAR3PQ9P1P4 343 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 LHFPL6Q9Y693 200 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 PIN1P1O15428 100 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 RFPL3SP0C7P2 107 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 ZNF250P15622 560 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 RPS4XP62701 263 aaKnown RBP11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 TMEM182Q6ZP80 229 aaPredicted RBP11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 BHLHA15Q7RTS1 189 aaPredicted RBP11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 RBPMSQ93062 196 aaKnown RBP11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 MS4A3Q96HJ5 214 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 DLL4Q9NR61 685 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 ESPL1Q14674 2120 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 E5RGE8 158 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 GSTZ1O43708 216 aaPredicted RBP11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 TPPPO94811 219 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 KRASP01116 189 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 ALDH3B1P43353 468 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 RAB4BP61018 213 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 TLE4Q04727 773 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 TESK1Q15569 626 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 Q5BKY6 102 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 CD200R1LQ6Q8B3 271 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 NSG2Q9Y328 171 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 CTDSPLO15194 276 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 IGHV3-13P01766 116 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 IGHV3-7P01780 117 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 HPXP02790 462 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 FREM3P0C091 2139 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 TEX261Q6UWH6 196 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 FAM122BQ7Z309 247 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 SLC39A7Q92504 469 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 SLC26A1Q9H2B4 701 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 U3KQ87 197 aa11.45□□□□□ -0.58
PCDHGB1-201ENST00000523390 A0A1W2PPH5 198 aa11.44□□□□□ -0.58
PCDHGB1-201ENST00000523390 TMEM229AB2RXF0 380 aa11.44□□□□□ -0.58
PCDHGB1-201ENST00000523390 KRBOX1C9JBD0 128 aa11.44□□□□□ -0.58
PCDHGB1-201ENST00000523390 SNAPINO95295 136 aa11.44□□□□□ -0.58
PCDHGB1-201ENST00000523390 ZNF92Q03936 586 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms