RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 PLCXD1Q9NUJ7 323 aa14.7□□□□□ -0.06
CLK4-211ENST00000522556 TAS2R4Q9NYW5 299 aa14.7□□□□□ -0.06
CLK4-211ENST00000522556 DHDHQ9UQ10 334 aa14.7□□□□□ -0.06
CLK4-211ENST00000522556 CENPVL3A0A0U1RRI6 287 aa14.69□□□□□ -0.06
CLK4-211ENST00000522556 MEX3AA1L020 520 aaKnown RBP14.69□□□□□ -0.06
CLK4-211ENST00000522556 EFCAB10A6NFE3 127 aa14.69□□□□□ -0.06
CLK4-211ENST00000522556 SLC1A7O00341 560 aa14.69□□□□□ -0.06
CLK4-211ENST00000522556 OGG1O15527 345 aa14.69□□□□□ -0.06
CLK4-211ENST00000522556 ECDO95905 644 aaPredicted RBP14.69□□□□□ -0.06
CLK4-211ENST00000522556 DUSP1P28562 367 aa14.69□□□□□ -0.06
CLK4-211ENST00000522556 ATP1B3P54709 279 aa14.69□□□□□ -0.06
CLK4-211ENST00000522556 CAV3P56539 151 aa14.69□□□□□ -0.06
CLK4-211ENST00000522556 MRPL28Q13084 256 aaKnown RBP14.69□□□□□ -0.06
CLK4-211ENST00000522556 METTL11BQ5VVY1 283 aa14.69□□□□□ -0.06
CLK4-211ENST00000522556 RPL22L1Q6P5R6 122 aaKnown RBP14.69□□□□□ -0.06
CLK4-211ENST00000522556 IZUMO2Q6UXV1 221 aa14.69□□□□□ -0.06
CLK4-211ENST00000522556 TMPRSS11AQ6ZMR5 421 aa14.69□□□□□ -0.06
CLK4-211ENST00000522556 VMO1Q7Z5L0 202 aa14.69□□□□□ -0.06
CLK4-211ENST00000522556 EGFL6Q8IUX8 553 aa14.69□□□□□ -0.06
CLK4-211ENST00000522556 PARP16Q8N5Y8 322 aa14.69□□□□□ -0.06
CLK4-211ENST00000522556 C8orf46Q8TAG6 207 aa14.69□□□□□ -0.06
CLK4-211ENST00000522556 LHX4Q969G2 390 aa14.69□□□□□ -0.06
CLK4-211ENST00000522556 SPSB1Q96BD6 273 aa14.69□□□□□ -0.06
CLK4-211ENST00000522556 PGLYRP3Q96LB9 341 aa14.69□□□□□ -0.06
CLK4-211ENST00000522556 MS4A7Q9GZW8 240 aaPredicted RBP14.69□□□□□ -0.06
CLK4-211ENST00000522556 CNTD2Q9H8S5 307 aa14.69□□□□□ -0.06
CLK4-211ENST00000522556 BABAM2Q9NXR7 383 aa14.69□□□□□ -0.06
CLK4-211ENST00000522556 CNOT2Q9NZN8 540 aaKnown RBP14.69□□□□□ -0.06
CLK4-211ENST00000522556 DSCAML1Q8TD84 2053 aa14.69□□□□□ -0.06
CLK4-211ENST00000522556 KNG1P01042 644 aa14.68□□□□□ -0.06
CLK4-211ENST00000522556 PRKACBP22694 351 aa14.68□□□□□ -0.06
CLK4-211ENST00000522556 CAPZA1P52907 286 aa14.68□□□□□ -0.06
CLK4-211ENST00000522556 ZP1P60852 638 aa14.68□□□□□ -0.06
CLK4-211ENST00000522556 RPS11P62280 158 aaKnown RBP eCLIP14.68□□□□□ -0.06
CLK4-211ENST00000522556 COL10A1Q03692 680 aa14.68□□□□□ -0.06
CLK4-211ENST00000522556 PDZK1IP1Q13113 114 aa14.68□□□□□ -0.06
CLK4-211ENST00000522556 CCDC58Q4VC31 144 aa14.68□□□□□ -0.06
CLK4-211ENST00000522556 C6orf141Q5SZD1 244 aa14.68□□□□□ -0.06
CLK4-211ENST00000522556 DMKNQ6E0U4 476 aaPredicted RBP14.68□□□□□ -0.06
CLK4-211ENST00000522556 LHFPL2Q6ZUX7 228 aa14.68□□□□□ -0.06
CLK4-211ENST00000522556 OR4M1Q8NGD0 313 aa14.68□□□□□ -0.06
CLK4-211ENST00000522556 EMG1Q92979 244 aaKnown RBP14.68□□□□□ -0.06
CLK4-211ENST00000522556 SMIM19Q96E16 107 aa14.68□□□□□ -0.06
CLK4-211ENST00000522556 MYCBPQ99417 103 aaPredicted RBP14.68□□□□□ -0.06
CLK4-211ENST00000522556 SUCNR1Q9BXA5 334 aa14.68□□□□□ -0.06
CLK4-211ENST00000522556 TMEM82A0PJX8 343 aa14.67□□□□□ -0.06
CLK4-211ENST00000522556 MAGEA13PA6NCF6 341 aa14.67□□□□□ -0.06
CLK4-211ENST00000522556 DNAJC9-AS1A6NH13 148 aa14.67□□□□□ -0.06
CLK4-211ENST00000522556 H0YHG0 523 aa14.67□□□□□ -0.06
CLK4-211ENST00000522556 SULT1B1O43704 296 aa14.67□□□□□ -0.06
CLK4-211ENST00000522556 ZNF737O75373 536 aa14.67□□□□□ -0.06
CLK4-211ENST00000522556 ATP6V1G2O95670 118 aa14.67□□□□□ -0.06
CLK4-211ENST00000522556 MT-ND2P03891 347 aa14.67□□□□□ -0.06
CLK4-211ENST00000522556 LIPFP07098 398 aa14.67□□□□□ -0.06
CLK4-211ENST00000522556 ERVFRD-1P60508 538 aa14.67□□□□□ -0.06
CLK4-211ENST00000522556 DEFB112Q30KQ8 113 aa14.67□□□□□ -0.06
CLK4-211ENST00000522556 ZNF529Q6P280 563 aa14.67□□□□□ -0.06
CLK4-211ENST00000522556 C9orf139Q6ZV77 190 aa14.67□□□□□ -0.06
CLK4-211ENST00000522556 USP43Q70EL4 1123 aa14.67□□□□□ -0.06
CLK4-211ENST00000522556 FAM185AQ8N0U4 392 aa14.67□□□□□ -0.06
CLK4-211ENST00000522556 PNKDQ8N490 385 aa14.67□□□□□ -0.06
CLK4-211ENST00000522556 STX19Q8N4C7 294 aa14.67□□□□□ -0.06
CLK4-211ENST00000522556 TAF15Q92804 592 aaKnown RBP eCLIP14.67□□□□□ -0.06
CLK4-211ENST00000522556 GHSRQ92847 366 aa14.67□□□□□ -0.06
CLK4-211ENST00000522556 A0A1W2PQ09 198 aa14.66□□□□□ -0.06
CLK4-211ENST00000522556 A0A1W2PRD5 423 aa14.66□□□□□ -0.06
CLK4-211ENST00000522556 A0A1W2PRF3 423 aa14.66□□□□□ -0.06
CLK4-211ENST00000522556 A0A1W2PRM7 423 aa14.66□□□□□ -0.06
CLK4-211ENST00000522556 H0YJX3 145 aa14.66□□□□□ -0.06
CLK4-211ENST00000522556 CDK1P06493 297 aa14.66□□□□□ -0.06
CLK4-211ENST00000522556 HCKP08631 526 aa14.66□□□□□ -0.06
CLK4-211ENST00000522556 RPSAP08865 295 aaKnown RBP14.66□□□□□ -0.06
CLK4-211ENST00000522556 MYF6P23409 242 aa14.66□□□□□ -0.06
CLK4-211ENST00000522556 FPR2P25090 351 aa14.66□□□□□ -0.06
CLK4-211ENST00000522556 SCGB2A2Q13296 93 aa14.66□□□□□ -0.06
CLK4-211ENST00000522556 ZNF273Q14593 569 aa14.66□□□□□ -0.06
CLK4-211ENST00000522556 GPR157Q5UAW9 335 aa14.66□□□□□ -0.06
CLK4-211ENST00000522556 SERPINA12Q8IW75 414 aa14.66□□□□□ -0.06
CLK4-211ENST00000522556 ZNF561Q8N587 486 aa14.66□□□□□ -0.06
CLK4-211ENST00000522556 ASCC1Q8N9N2 400 aaKnown RBP14.66□□□□□ -0.06
CLK4-211ENST00000522556 OR52N4Q8NGI2 321 aa14.66□□□□□ -0.06
CLK4-211ENST00000522556 GPR148Q8TDV2 347 aa14.66□□□□□ -0.06
CLK4-211ENST00000522556 TMEM106AQ96A25 262 aa14.66□□□□□ -0.06
CLK4-211ENST00000522556 ZNF281Q9Y2X9 895 aa14.66□□□□□ -0.06
CLK4-211ENST00000522556 KPTNQ9Y664 436 aa14.66□□□□□ -0.06
CLK4-211ENST00000522556 A0A0A6YYJ9 748 aa14.65□□□□□ -0.06
CLK4-211ENST00000522556 IGHV1-69DA0A0B4J2H0 117 aa14.65□□□□□ -0.06
CLK4-211ENST00000522556 TRBV5-5A0A0J9YX44 114 aa14.65□□□□□ -0.06
CLK4-211ENST00000522556 PTGES3LE9PB15 166 aa14.65□□□□□ -0.06
CLK4-211ENST00000522556 RNASEK-C17orf49H0YIS7 233 aa14.65□□□□□ -0.06
CLK4-211ENST00000522556 MYL12BO14950 172 aa14.65□□□□□ -0.06
CLK4-211ENST00000522556 GPR37O15354 613 aa14.65□□□□□ -0.06
CLK4-211ENST00000522556 HAND1O96004 215 aa14.65□□□□□ -0.06
CLK4-211ENST00000522556 IGHV1-69P01742 117 aa14.65□□□□□ -0.06
CLK4-211ENST00000522556 TK1P04183 234 aa14.65□□□□□ -0.06
CLK4-211ENST00000522556 OCM2P0CE71 109 aa14.65□□□□□ -0.06
CLK4-211ENST00000522556 OCMP0CE72 109 aaPredicted RBP14.65□□□□□ -0.06
CLK4-211ENST00000522556 CCL3L1P16619 93 aa14.65□□□□□ -0.06
CLK4-211ENST00000522556 PRKACAP17612 351 aa14.65□□□□□ -0.06
CLK4-211ENST00000522556 UBA52P62987 128 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms