RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 A0A1W2PRV1 198 aa16.82■□□□□ 0.28
SDCBP-209ENST00000522243 DAPL1A0PJW8 107 aa16.82■□□□□ 0.28
SDCBP-209ENST00000522243 M0QZ24 198 aa16.82■□□□□ 0.28
SDCBP-209ENST00000522243 ZNF737O75373 536 aa16.82■□□□□ 0.28
SDCBP-209ENST00000522243 CHRM2P08172 466 aa16.82■□□□□ 0.28
SDCBP-209ENST00000522243 UBCP0CG48 685 aaKnown RBP16.82■□□□□ 0.28
SDCBP-209ENST00000522243 POU3F4P49335 361 aa16.82■□□□□ 0.28
SDCBP-209ENST00000522243 DLX6P56179 175 aa16.82■□□□□ 0.28
SDCBP-209ENST00000522243 LGALS4P56470 323 aa16.82■□□□□ 0.28
SDCBP-209ENST00000522243 DEFA6Q01524 100 aa16.82■□□□□ 0.28
SDCBP-209ENST00000522243 CNN3Q15417 329 aaKnown RBP16.82■□□□□ 0.28
SDCBP-209ENST00000522243 LRRC75BQ2VPJ9 315 aa16.82■□□□□ 0.28
SDCBP-209ENST00000522243 EMG1Q92979 244 aaKnown RBP16.82■□□□□ 0.28
SDCBP-209ENST00000522243 MEGF9Q9H1U4 602 aa16.82■□□□□ 0.28
SDCBP-209ENST00000522243 FRRS1LQ9P0K9 344 aa16.82■□□□□ 0.28
SDCBP-209ENST00000522243 SIGLEC9Q9Y336 463 aa16.82■□□□□ 0.28
SDCBP-209ENST00000522243 DSCAML1Q8TD84 2053 aa16.81■□□□□ 0.28
SDCBP-209ENST00000522243 IGKV1-9A0A0C4DH69 117 aa16.81■□□□□ 0.28
SDCBP-209ENST00000522243 TMEM82A0PJX8 343 aa16.81■□□□□ 0.28
SDCBP-209ENST00000522243 CALCBP10092 127 aa16.81■□□□□ 0.28
SDCBP-209ENST00000522243 SNU13P55769 128 aaKnown RBP16.81■□□□□ 0.28
SDCBP-209ENST00000522243 NANOS3P60323 173 aaKnown RBP16.81■□□□□ 0.28
SDCBP-209ENST00000522243 EDDM3AQ14507 147 aa16.81■□□□□ 0.28
SDCBP-209ENST00000522243 PLA1AQ53H76 456 aa16.81■□□□□ 0.28
SDCBP-209ENST00000522243 TMEM244Q5VVB8 128 aa16.81■□□□□ 0.28
SDCBP-209ENST00000522243 GDPD3Q7L5L3 318 aa16.81■□□□□ 0.28
SDCBP-209ENST00000522243 LHFPL4Q7Z7J7 247 aa16.81■□□□□ 0.28
SDCBP-209ENST00000522243 PPP1R35Q8TAP8 253 aa16.81■□□□□ 0.28
SDCBP-209ENST00000522243 FGGYQ96C11 551 aa16.81■□□□□ 0.28
SDCBP-209ENST00000522243 MGAM2Q2M2H8 2515 aa16.8■□□□□ 0.28
SDCBP-209ENST00000522243 C17orf98A8MV24 154 aa16.8■□□□□ 0.28
SDCBP-209ENST00000522243 J3QRE1 110 aa16.8■□□□□ 0.28
SDCBP-209ENST00000522243 ATF1P18846 271 aa16.8■□□□□ 0.28
SDCBP-209ENST00000522243 DUSP1P28562 367 aa16.8■□□□□ 0.28
SDCBP-209ENST00000522243 NPBWR2P48146 333 aa16.8■□□□□ 0.28
SDCBP-209ENST00000522243 RBP2P50120 134 aa16.8■□□□□ 0.28
SDCBP-209ENST00000522243 ALDH3A2P51648 485 aa16.8■□□□□ 0.28
SDCBP-209ENST00000522243 ATP1B3P54709 279 aa16.8■□□□□ 0.28
SDCBP-209ENST00000522243 SNRPGP62308 76 aaKnown RBP16.8■□□□□ 0.28
SDCBP-209ENST00000522243 ACTC1P68032 377 aa16.8■□□□□ 0.28
SDCBP-209ENST00000522243 ACTA1P68133 377 aa16.8■□□□□ 0.28
SDCBP-209ENST00000522243 CBR4Q8N4T8 237 aa16.8■□□□□ 0.28
SDCBP-209ENST00000522243 TPRX1Q8N7U7 411 aa16.8■□□□□ 0.28
SDCBP-209ENST00000522243 PP6455Q8WZ26 134 aa16.8■□□□□ 0.28
SDCBP-209ENST00000522243 RFT1Q96AA3 541 aa16.8■□□□□ 0.28
SDCBP-209ENST00000522243 C10orf35Q96D05 121 aa16.8■□□□□ 0.28
SDCBP-209ENST00000522243 RBFOX1Q9NWB1 397 aaKnown RBP16.8■□□□□ 0.28
SDCBP-209ENST00000522243 J3QLW9 94 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 SLC16A6O15403 523 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 HAND1O96004 215 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 IGHA1P01876 353 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 ARG1P05089 322 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 HTR1AP08908 422 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 ZNF728P0DKX0 622 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 ZNF19P17023 458 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 ZNF20P17024 532 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 BCL3P20749 454 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 AZGP1P25311 298 aaKnown RBP16.79■□□□□ 0.28
SDCBP-209ENST00000522243 GABRA5P31644 462 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 MTCP1P56278 107 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 OCLNQ16625 522 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 MEDAGQ5VYS4 303 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 CCDC121Q6ZUS5 278 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 OR8H2Q8N162 312 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 DYNAPQ8N1N2 210 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 OR52N4Q8NGI2 321 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 OR10AC1Q8NH08 325 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 SNX22Q96L94 193 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 MBOAT4Q96T53 435 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 CHST6Q9GZX3 395 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 GMPPBQ9Y5P6 360 aa16.79■□□□□ 0.28
SDCBP-209ENST00000522243 E9PQ18 207 aa16.78■□□□□ 0.28
SDCBP-209ENST00000522243 SLC25A30Q5SVS4 291 aa16.78■□□□□ 0.28
SDCBP-209ENST00000522243 HIST2H2BDQ6DRA6 164 aa16.78■□□□□ 0.28
SDCBP-209ENST00000522243 ZFP1Q6P2D0 407 aa16.78■□□□□ 0.28
SDCBP-209ENST00000522243 TCF23Q7RTU1 214 aa16.78■□□□□ 0.28
SDCBP-209ENST00000522243 KCTD20Q7Z5Y7 419 aa16.78■□□□□ 0.28
SDCBP-209ENST00000522243 ACBD7Q8N6N7 88 aa16.78■□□□□ 0.28
SDCBP-209ENST00000522243 DNAAF1Q8NEP3 725 aa16.78■□□□□ 0.28
SDCBP-209ENST00000522243 OR51A4Q8NGJ6 313 aa16.78■□□□□ 0.28
SDCBP-209ENST00000522243 LGALS12Q96DT0 336 aa16.78■□□□□ 0.28
SDCBP-209ENST00000522243 C4orf36Q96KX1 117 aa16.78■□□□□ 0.28
SDCBP-209ENST00000522243 MMP27Q9H306 513 aa16.78■□□□□ 0.28
SDCBP-209ENST00000522243 FBLN5Q9UBX5 448 aa16.78■□□□□ 0.28
SDCBP-209ENST00000522243 EXOGQ9Y2C4 368 aaKnown RBP16.78■□□□□ 0.28
SDCBP-209ENST00000522243 TRRAPQ9Y4A5 3859 aa16.77■□□□□ 0.28
SDCBP-209ENST00000522243 TSPAN15O95858 294 aa16.77■□□□□ 0.28
SDCBP-209ENST00000522243 CYB5AP00167 134 aa16.77■□□□□ 0.28
SDCBP-209ENST00000522243 ISG15P05161 165 aa16.77■□□□□ 0.28
SDCBP-209ENST00000522243 PRKACAP17612 351 aa16.77■□□□□ 0.28
SDCBP-209ENST00000522243 GABRR1P24046 479 aa16.77■□□□□ 0.28
SDCBP-209ENST00000522243 RAB13P51153 203 aa16.77■□□□□ 0.28
SDCBP-209ENST00000522243 ZNF91Q05481 1191 aa16.77■□□□□ 0.28
SDCBP-209ENST00000522243 GRK1Q15835 563 aa16.77■□□□□ 0.28
SDCBP-209ENST00000522243 FDX2Q6P4F2 183 aa16.77■□□□□ 0.28
SDCBP-209ENST00000522243 CRIP3Q6Q6R5 217 aa16.77■□□□□ 0.28
SDCBP-209ENST00000522243 RNF144BQ7Z419 303 aa16.77■□□□□ 0.28
SDCBP-209ENST00000522243 LHFPL3Q86UP9 236 aa16.77■□□□□ 0.28
SDCBP-209ENST00000522243 FAM58AQ8N1B3 248 aa16.77■□□□□ 0.28
SDCBP-209ENST00000522243 OR13D1Q8NGV5 346 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms