RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 NOS1APO75052 506 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-208ENST00000520561 OR7C1O76099 320 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-208ENST00000520561 CD8AP01732 235 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 ACAA1P09110 424 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-208ENST00000520561 FAM90A15PP0C7V4 464 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 FAM90A13PP0C7W8 464 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 FAM90A14PP0C7W9 464 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 FAM90A24PP0C7X0 464 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 GABRR1P24046 479 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 PTBP1P26599 531 aaKnown RBP eCLIP7.56□□□□□ -1.2
CSMD1-208ENST00000520561 CFHR2P36980 270 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 MNDAP41218 407 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 VEGFCP49767 419 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 SNU13P55769 128 aaKnown RBP7.56□□□□□ -1.2
CSMD1-208ENST00000520561 TAS2R20P59543 309 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 PITPNAQ00169 270 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 IKZF1Q13422 519 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 MADCAM1Q13477 382 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 ARL6IP1Q15041 203 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 ZNF181Q2M3W8 571 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 MPV17LQ2QL34 196 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 PIGYQ3MUY2 71 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 SPRNQ5BIV9 151 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 NHLRC3Q5JS37 347 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 C11orf53Q8IXP5 236 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 IZUMO1Q8IYV9 350 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 ZCCHC24Q8N2G6 241 aaKnown RBP7.56□□□□□ -1.2
CSMD1-208ENST00000520561 MFSD4AQ8N468 514 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 BOLLQ8N9W6 283 aaKnown RBP7.56□□□□□ -1.2
CSMD1-208ENST00000520561 CHST4Q8NCG5 386 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 Q8NFD4 153 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 OR10R2Q8NGX6 335 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 NEU4Q8WWR8 484 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-208ENST00000520561 RAB3CQ96E17 227 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 C14orf79Q96F83 325 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 POM121Q96HA1 1249 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 NEDD4LQ96PU5 975 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 CCL19Q99731 98 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 NUDT16L1Q9BRJ7 211 aaKnown RBP7.56□□□□□ -1.2
CSMD1-208ENST00000520561 NICN1Q9BSH3 213 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 GCM1Q9NP62 436 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 RASL12Q9NYN1 266 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 DNAJB11Q9UBS4 358 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 GLS2Q9UI32 602 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 MRPS7Q9Y2R9 242 aaKnown RBP7.56□□□□□ -1.2
CSMD1-208ENST00000520561 V9GYH0 126 aa7.56□□□□□ -1.2
CSMD1-208ENST00000520561 UBR5O95071 2799 aaPredicted RBP7.55□□□□□ -1.2
CSMD1-208ENST00000520561 RAI1Q7Z5J4 1906 aaPredicted RBP7.55□□□□□ -1.2
CSMD1-208ENST00000520561 TRAV18A0A075B6X5 111 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 A0A0A6YYD4 124 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 GEMIN2O14893 280 aaKnown RBP7.55□□□□□ -1.2
CSMD1-208ENST00000520561 PDCD6O75340 191 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 TPPPO94811 219 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 CYB5R3P00387 301 aaPredicted RBP7.55□□□□□ -1.2
CSMD1-208ENST00000520561 KNG1P01042 644 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 HPXP02790 462 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 ZNF44P15621 663 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 CD40LGP29965 261 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 BLVRBP30043 206 aaPredicted RBP7.55□□□□□ -1.2
CSMD1-208ENST00000520561 SSTR2P30874 369 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 CD80P33681 288 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 ERVK11-1P61568 191 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 MRPS10P82664 201 aaKnown RBP7.55□□□□□ -1.2
CSMD1-208ENST00000520561 TAF9Q16594 264 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 HFEQ30201 348 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 MOGAT2Q3SYC2 334 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 PYDC2Q56P42 97 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 SPIN3Q5JUX0 258 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 NKAPLQ5M9Q1 402 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 ACP7Q6ZNF0 438 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 FAM90A1Q86YD7 464 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 SNX29P2Q8IUI4 249 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 GCSAMQ8N6F7 178 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 DTX3Q8N9I9 347 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 CXorf56Q9H5V9 222 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 PLEKHF2Q9H8W4 249 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 SPACA1Q9HBV2 294 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 HES4Q9HCC6 221 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 IL36RNQ9UBH0 155 aa7.55□□□□□ -1.2
CSMD1-208ENST00000520561 USP9XQ93008 2570 aaPredicted RBP7.55□□□□□ -1.2
CSMD1-208ENST00000520561 A0A0G2JMP0 313 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 A0A0X1KG70 313 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 NKX6-3A6NJ46 265 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 F8VVB4 439 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 F8VWA3 439 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 RAB27BO00194 218 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 WNT9BO14905 357 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 SOCS1O15524 211 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 GSTP1P09211 210 aaKnown RBP7.54□□□□□ -1.2
CSMD1-208ENST00000520561 INHBBP09529 407 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 HIST1H1DP16402 221 aaKnown RBP7.54□□□□□ -1.2
CSMD1-208ENST00000520561 EGR1P18146 543 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 CDKN1AP38936 164 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 PMELP40967 661 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 ZNF146Q15072 292 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 ZNF79Q15937 498 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 ATAD3CQ5T2N8 411 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 Q6ZTK2 550 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 BIVMQ86UB2 503 aa7.54□□□□□ -1.2
CSMD1-208ENST00000520561 FAM89BQ8N5H3 189 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms