RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 ZNF737O75373 536 aa20.57■□□□□ 0.88
VEGFA-220ENST00000519767 ISL1P61371 349 aa20.57■□□□□ 0.88
VEGFA-220ENST00000519767 ZNF273Q14593 569 aa20.57■□□□□ 0.88
VEGFA-220ENST00000519767 PDLIM3Q53GG5 364 aaPredicted RBP20.57■□□□□ 0.88
VEGFA-220ENST00000519767 ENTHD1Q8IYW4 607 aa20.57■□□□□ 0.88
VEGFA-220ENST00000519767 BATF2Q8N1L9 274 aa20.57■□□□□ 0.88
VEGFA-220ENST00000519767 OR4C13Q8NGP0 309 aa20.57■□□□□ 0.88
VEGFA-220ENST00000519767 IGKV1-27A0A075B6S5 117 aa20.56■□□□□ 0.88
VEGFA-220ENST00000519767 FAM90A8PA6NJQ4 464 aa20.56■□□□□ 0.88
VEGFA-220ENST00000519767 ZNF728P0DKX0 622 aa20.56■□□□□ 0.88
VEGFA-220ENST00000519767 COX7A1P24310 79 aa20.56■□□□□ 0.88
VEGFA-220ENST00000519767 RBP2P50120 134 aa20.56■□□□□ 0.88
VEGFA-220ENST00000519767 ATP1B3P54709 279 aa20.56■□□□□ 0.88
VEGFA-220ENST00000519767 DLX6P56179 175 aa20.56■□□□□ 0.88
VEGFA-220ENST00000519767 ACTC1P68032 377 aa20.56■□□□□ 0.88
VEGFA-220ENST00000519767 ACTA1P68133 377 aa20.56■□□□□ 0.88
VEGFA-220ENST00000519767 ZNF85Q03923 595 aa20.56■□□□□ 0.88
VEGFA-220ENST00000519767 MEF2CQ06413 473 aaPredicted RBP20.56■□□□□ 0.88
VEGFA-220ENST00000519767 LY6EQ16553 131 aa20.56■□□□□ 0.88
VEGFA-220ENST00000519767 SLC25A26Q70HW3 274 aa20.56■□□□□ 0.88
VEGFA-220ENST00000519767 OR13D1Q8NGV5 346 aa20.56■□□□□ 0.88
VEGFA-220ENST00000519767 PPP1R35Q8TAP8 253 aa20.56■□□□□ 0.88
VEGFA-220ENST00000519767 SLAMF9Q96A28 289 aa20.56■□□□□ 0.88
VEGFA-220ENST00000519767 HRASLS5Q96KN8 279 aa20.56■□□□□ 0.88
VEGFA-220ENST00000519767 SNX22Q96L94 193 aa20.56■□□□□ 0.88
VEGFA-220ENST00000519767 RANBP3Q9H6Z4 567 aaPredicted RBP20.56■□□□□ 0.88
VEGFA-220ENST00000519767 LOC107986453A0A1B0GWG9 222 aa20.55■□□□□ 0.88
VEGFA-220ENST00000519767 VGLL3A8MV65 326 aa20.55■□□□□ 0.88
VEGFA-220ENST00000519767 F8VVB4 439 aa20.55■□□□□ 0.88
VEGFA-220ENST00000519767 F8VWA3 439 aa20.55■□□□□ 0.88
VEGFA-220ENST00000519767 H3BSH0 61 aa20.55■□□□□ 0.88
VEGFA-220ENST00000519767 CYB5AP00167 134 aa20.55■□□□□ 0.88
VEGFA-220ENST00000519767 PIPP12273 146 aaPredicted RBP20.55■□□□□ 0.88
VEGFA-220ENST00000519767 PRKACBP22694 351 aa20.55■□□□□ 0.88
VEGFA-220ENST00000519767 SNRPGP62308 76 aaKnown RBP20.55■□□□□ 0.88
VEGFA-220ENST00000519767 C2orf68Q2NKX9 166 aa20.55■□□□□ 0.88
VEGFA-220ENST00000519767 TP53I3Q53FA7 332 aa20.55■□□□□ 0.88
VEGFA-220ENST00000519767 MEDAGQ5VYS4 303 aa20.55■□□□□ 0.88
VEGFA-220ENST00000519767 CRIP3Q6Q6R5 217 aa20.55■□□□□ 0.88
VEGFA-220ENST00000519767 OR8H2Q8N162 312 aa20.55■□□□□ 0.88
VEGFA-220ENST00000519767 MALSU1Q96EH3 234 aa20.55■□□□□ 0.88
VEGFA-220ENST00000519767 CDCA4Q9BXL8 241 aa20.55■□□□□ 0.88
VEGFA-220ENST00000519767 SNTNA6NMZ2 147 aa20.54■□□□□ 0.88
VEGFA-220ENST00000519767 ISG15P05161 165 aa20.54■□□□□ 0.88
VEGFA-220ENST00000519767 ALPLP05186 524 aa20.54■□□□□ 0.88
VEGFA-220ENST00000519767 KIR3DL2P43630 455 aa20.54■□□□□ 0.88
VEGFA-220ENST00000519767 EDDM3BP56851 147 aa20.54■□□□□ 0.88
VEGFA-220ENST00000519767 FDX2Q6P4F2 183 aa20.54■□□□□ 0.88
VEGFA-220ENST00000519767 ZNF782Q6ZMW2 699 aaPredicted RBP20.54■□□□□ 0.88
VEGFA-220ENST00000519767 Q6ZTK2 550 aa20.54■□□□□ 0.88
VEGFA-220ENST00000519767 UTS2BQ765I0 119 aa20.54■□□□□ 0.88
VEGFA-220ENST00000519767 RDH10Q8IZV5 341 aa20.54■□□□□ 0.88
VEGFA-220ENST00000519767 OR2G2Q8NGZ5 317 aa20.54■□□□□ 0.88
VEGFA-220ENST00000519767 PIFOQ8TCI5 191 aa20.54■□□□□ 0.88
VEGFA-220ENST00000519767 MYCBPQ99417 103 aaPredicted RBP20.54■□□□□ 0.88
VEGFA-220ENST00000519767 NPFFR1Q9GZQ6 430 aa20.54■□□□□ 0.88
VEGFA-220ENST00000519767 TBL2Q9Y4P3 447 aaKnown RBP20.54■□□□□ 0.88
VEGFA-220ENST00000519767 hADV38S2A0JD32 116 aa20.53■□□□□ 0.88
VEGFA-220ENST00000519767 DAPL1A0PJW8 107 aa20.53■□□□□ 0.88
VEGFA-220ENST00000519767 BMXP51813 675 aa20.53■□□□□ 0.88
VEGFA-220ENST00000519767 MTCP1P56278 107 aa20.53■□□□□ 0.88
VEGFA-220ENST00000519767 HERPUD1Q15011 391 aa20.53■□□□□ 0.88
VEGFA-220ENST00000519767 OR11H6Q8NGC7 330 aa20.53■□□□□ 0.88
VEGFA-220ENST00000519767 OR2T6Q8NHC8 308 aa20.53■□□□□ 0.88
VEGFA-220ENST00000519767 PYDC1Q8WXC3 89 aa20.53■□□□□ 0.88
VEGFA-220ENST00000519767 EMG1Q92979 244 aaKnown RBP20.53■□□□□ 0.88
VEGFA-220ENST00000519767 RNF166Q96A37 237 aaPredicted RBP20.53■□□□□ 0.88
VEGFA-220ENST00000519767 FOXRED1Q96CU9 486 aaPredicted RBP20.53■□□□□ 0.88
VEGFA-220ENST00000519767 GLS2Q9UI32 602 aa20.53■□□□□ 0.88
VEGFA-220ENST00000519767 J3QRE1 110 aa20.52■□□□□ 0.88
VEGFA-220ENST00000519767 ENTPD6O75354 484 aa20.52■□□□□ 0.88
VEGFA-220ENST00000519767 INMTO95050 263 aa20.52■□□□□ 0.88
VEGFA-220ENST00000519767 PEX2P28328 305 aa20.52■□□□□ 0.88
VEGFA-220ENST00000519767 CCR9P51686 369 aa20.52■□□□□ 0.88
VEGFA-220ENST00000519767 EFNB2P52799 333 aa20.52■□□□□ 0.88
VEGFA-220ENST00000519767 C10orf67Q8IYJ2 551 aa20.52■□□□□ 0.88
VEGFA-220ENST00000519767 RNFT2Q96EX2 444 aa20.52■□□□□ 0.88
VEGFA-220ENST00000519767 MRPL48Q96GC5 212 aaKnown RBP20.52■□□□□ 0.88
VEGFA-220ENST00000519767 FRRS1LQ9P0K9 344 aa20.52■□□□□ 0.88
VEGFA-220ENST00000519767 TMEM82A0PJX8 343 aa20.51■□□□□ 0.87
VEGFA-220ENST00000519767 SLC16A6O15403 523 aa20.51■□□□□ 0.87
VEGFA-220ENST00000519767 HAND1O96004 215 aa20.51■□□□□ 0.87
VEGFA-220ENST00000519767 ARG1P05089 322 aa20.51■□□□□ 0.87
VEGFA-220ENST00000519767 IGHV1-8P0DP01 117 aa20.51■□□□□ 0.87
VEGFA-220ENST00000519767 ZNF20P17024 532 aa20.51■□□□□ 0.87
VEGFA-220ENST00000519767 ATF1P18846 271 aa20.51■□□□□ 0.87
VEGFA-220ENST00000519767 ZFP1Q6P2D0 407 aa20.51■□□□□ 0.87
VEGFA-220ENST00000519767 FAM58AQ8N1B3 248 aa20.51■□□□□ 0.87
VEGFA-220ENST00000519767 ACBD7Q8N6N7 88 aa20.51■□□□□ 0.87
VEGFA-220ENST00000519767 SPSB1Q96BD6 273 aa20.51■□□□□ 0.87
VEGFA-220ENST00000519767 FGGYQ96C11 551 aa20.51■□□□□ 0.87
VEGFA-220ENST00000519767 ADAT3Q96EY9 351 aaPredicted RBP20.51■□□□□ 0.87
VEGFA-220ENST00000519767 ZNF714Q96N38 554 aa20.51■□□□□ 0.87
VEGFA-220ENST00000519767 TRBV2A0A0J9YWF9 115 aa20.5■□□□□ 0.87
VEGFA-220ENST00000519767 ODF3BA8MYP8 253 aa20.5■□□□□ 0.87
VEGFA-220ENST00000519767 RPSAP08865 295 aaKnown RBP20.5■□□□□ 0.87
VEGFA-220ENST00000519767 CSF1P09603 554 aa20.5■□□□□ 0.87
VEGFA-220ENST00000519767 PAX6P26367 422 aa20.5■□□□□ 0.87
VEGFA-220ENST00000519767 ALDH3A2P51648 485 aa20.5■□□□□ 0.87
VEGFA-220ENST00000519767 ZNF146Q15072 292 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms