RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 MTCP1P56278 107 aa10.92□□□□□ -0.66
VEGFA-219ENST00000518824 COL10A1Q03692 680 aa10.92□□□□□ -0.66
VEGFA-219ENST00000518824 SLC34A1Q06495 639 aa10.92□□□□□ -0.66
VEGFA-219ENST00000518824 ST3GAL4Q11206 333 aa10.92□□□□□ -0.66
VEGFA-219ENST00000518824 BAMBIQ13145 260 aa10.92□□□□□ -0.66
VEGFA-219ENST00000518824 CDK5R1Q15078 307 aa10.92□□□□□ -0.66
VEGFA-219ENST00000518824 CNN3Q15417 329 aaKnown RBP10.92□□□□□ -0.66
VEGFA-219ENST00000518824 SLC9A3R2Q15599 337 aa10.92□□□□□ -0.66
VEGFA-219ENST00000518824 GPR157Q5UAW9 335 aa10.92□□□□□ -0.66
VEGFA-219ENST00000518824 HCP5Q6MZN7 132 aa10.92□□□□□ -0.66
VEGFA-219ENST00000518824 C8orf59Q8N0T1 100 aaPredicted RBP10.92□□□□□ -0.66
VEGFA-219ENST00000518824 FAM185AQ8N0U4 392 aa10.92□□□□□ -0.66
VEGFA-219ENST00000518824 SETD9Q8NE22 299 aa10.92□□□□□ -0.66
VEGFA-219ENST00000518824 DNAAF1Q8NEP3 725 aa10.92□□□□□ -0.66
VEGFA-219ENST00000518824 FAM216AQ8WUB2 273 aa10.92□□□□□ -0.66
VEGFA-219ENST00000518824 SGCDQ92629 289 aa10.92□□□□□ -0.66
VEGFA-219ENST00000518824 TFAP2CQ92754 450 aa10.92□□□□□ -0.66
VEGFA-219ENST00000518824 OPALINQ96PE5 141 aa10.92□□□□□ -0.66
VEGFA-219ENST00000518824 ZCCHC4Q9H5U6 513 aa10.92□□□□□ -0.66
VEGFA-219ENST00000518824 TNFRSF19Q9NS68 423 aa10.92□□□□□ -0.66
VEGFA-219ENST00000518824 CAB39Q9Y376 341 aaPredicted RBP10.92□□□□□ -0.66
VEGFA-219ENST00000518824 KPTNQ9Y664 436 aa10.92□□□□□ -0.66
VEGFA-219ENST00000518824 DSCAML1Q8TD84 2053 aa10.91□□□□□ -0.66
VEGFA-219ENST00000518824 IGHV1-69DA0A0B4J2H0 117 aa10.91□□□□□ -0.66
VEGFA-219ENST00000518824 A0A0U1RQK1 487 aa10.91□□□□□ -0.66
VEGFA-219ENST00000518824 TMEM82A0PJX8 343 aa10.91□□□□□ -0.66
VEGFA-219ENST00000518824 TMEM212A6NML5 194 aa10.91□□□□□ -0.66
VEGFA-219ENST00000518824 TRIM77I1YAP6 450 aa10.91□□□□□ -0.66
VEGFA-219ENST00000518824 GPR37O15354 613 aa10.91□□□□□ -0.66
VEGFA-219ENST00000518824 ZNF737O75373 536 aa10.91□□□□□ -0.66
VEGFA-219ENST00000518824 KNG1P01042 644 aa10.91□□□□□ -0.66
VEGFA-219ENST00000518824 IGHV1-69P01742 117 aa10.91□□□□□ -0.66
VEGFA-219ENST00000518824 PIPP12273 146 aaPredicted RBP10.91□□□□□ -0.66
VEGFA-219ENST00000518824 CCL3L1P16619 93 aa10.91□□□□□ -0.66
VEGFA-219ENST00000518824 PDZK1IP1Q13113 114 aa10.91□□□□□ -0.66
VEGFA-219ENST00000518824 IL18R1Q13478 541 aa10.91□□□□□ -0.66
VEGFA-219ENST00000518824 ZNF273Q14593 569 aa10.91□□□□□ -0.66
VEGFA-219ENST00000518824 C11orf91Q3C1V1 193 aa10.91□□□□□ -0.66
VEGFA-219ENST00000518824 AHSA2Q719I0 299 aa10.91□□□□□ -0.66
VEGFA-219ENST00000518824 EGFL6Q8IUX8 553 aa10.91□□□□□ -0.66
VEGFA-219ENST00000518824 C11orf42Q8N5U0 333 aa10.91□□□□□ -0.66
VEGFA-219ENST00000518824 BPIFB6Q8NFQ5 453 aa10.91□□□□□ -0.66
VEGFA-219ENST00000518824 OR52N4Q8NGI2 321 aa10.91□□□□□ -0.66
VEGFA-219ENST00000518824 EMG1Q92979 244 aaKnown RBP10.91□□□□□ -0.66
VEGFA-219ENST00000518824 MRPL48Q96GC5 212 aaKnown RBP10.91□□□□□ -0.66
VEGFA-219ENST00000518824 TMEM80Q96HE8 168 aa10.91□□□□□ -0.66
VEGFA-219ENST00000518824 PSORS1C1Q9UIG5 152 aa10.91□□□□□ -0.66
VEGFA-219ENST00000518824 A0A1W2PQ09 198 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 OGG1O15527 345 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 HOXA3O43365 443 aaPredicted RBP10.9□□□□□ -0.66
VEGFA-219ENST00000518824 TK1P04183 234 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 CCDC159P0C7I6 412 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 PRKACBP22694 351 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 PRTN3P24158 256 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 ZP1P60852 638 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 PDCD1Q15116 288 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 TMEM200BQ69YZ2 307 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 RPL22L1Q6P5R6 122 aaKnown RBP10.9□□□□□ -0.66
VEGFA-219ENST00000518824 LHFPL2Q6ZUX7 228 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 ZNF561Q8N587 486 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 PARP16Q8N5Y8 322 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 KIR3DL3Q8N743 410 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 ZFAND2BQ8WV99 257 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 TSEN15Q8WW01 171 aaKnown RBP10.9□□□□□ -0.66
VEGFA-219ENST00000518824 C17orf50Q8WW18 174 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 JMJD8Q96S16 334 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 COMMD4Q9H0A8 199 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 PRDM13Q9H4Q3 707 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 FKBP14Q9NWM8 211 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 BABAM2Q9NXR7 383 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 TAS2R4Q9NYW5 299 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 DHDHQ9UQ10 334 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 EXOSC1Q9Y3B2 195 aaKnown RBP10.9□□□□□ -0.66
VEGFA-219ENST00000518824 HSPE1-MOB4S4R3N1 261 aa10.9□□□□□ -0.66
VEGFA-219ENST00000518824 PNMA8CA0A1B0GUJ8 204 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 TMEM89A2RUT3 159 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 K7N7A8 449 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 SLC1A7O00341 560 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 PSPNO60542 156 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 MT-ND2P03891 347 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 MELTFP08582 738 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 PRKACAP17612 351 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 PAX6P26367 422 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 RPS11P62280 158 aaKnown RBP eCLIP10.89□□□□□ -0.67
VEGFA-219ENST00000518824 ACTG1P63261 375 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 MRPL28Q13084 256 aaKnown RBP10.89□□□□□ -0.67
VEGFA-219ENST00000518824 DMKNQ6E0U4 476 aaPredicted RBP10.89□□□□□ -0.67
VEGFA-219ENST00000518824 ZNF529Q6P280 563 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 RBMS3Q6XE24 437 aaKnown RBP10.89□□□□□ -0.67
VEGFA-219ENST00000518824 Q6YL49 198 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 TMPRSS11AQ6ZMR5 421 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 C17orf107Q6ZR85 190 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 TCF23Q7RTU1 214 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 MKXQ8IYA7 352 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 FAM58AQ8N1B3 248 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 TPRX1Q8N7U7 411 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 ASCC1Q8N9N2 400 aaKnown RBP10.89□□□□□ -0.67
VEGFA-219ENST00000518824 SPSB1Q96BD6 273 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 PGLYRP3Q96LB9 341 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 CHST6Q9GZX3 395 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms