RNA–Protein interactions for RNA: ENST00000517080.1

RNU6-1236P-201, Transcript of RNA, U6 small nuclear 1236, pseudogene, humanhuman

BASIC

Gene RNU6-1236P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1236P-201ENST00000517080 IFT80Q9P2H3 777 aaPredicted RBP-1.12□□□□□ -2.59
RNU6-1236P-201ENST00000517080 AASSQ9UDR5 926 aa-1.12□□□□□ -2.59
RNU6-1236P-201ENST00000517080 ZMAT5Q9UDW3 170 aaKnown RBP-1.12□□□□□ -2.59
RNU6-1236P-201ENST00000517080 SEC14L4Q9UDX3 406 aa-1.12□□□□□ -2.59
RNU6-1236P-201ENST00000517080 AMACRQ9UHK6 382 aa-1.12□□□□□ -2.59
RNU6-1236P-201ENST00000517080 KCNG1Q9UIX4 513 aa-1.12□□□□□ -2.59
RNU6-1236P-201ENST00000517080 EXOC6BQ9Y2D4 811 aa-1.12□□□□□ -2.59
RNU6-1236P-201ENST00000517080 CAB39Q9Y376 341 aaPredicted RBP-1.12□□□□□ -2.59
RNU6-1236P-201ENST00000517080 UBE2J1Q9Y385 318 aaPredicted RBP-1.12□□□□□ -2.59
RNU6-1236P-201ENST00000517080 ATP6V0A2Q9Y487 856 aa-1.12□□□□□ -2.59
RNU6-1236P-201ENST00000517080 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP-1.12□□□□□ -2.59
RNU6-1236P-201ENST00000517080 COL4A3BPQ9Y5P4 624 aa-1.12□□□□□ -2.59
RNU6-1236P-201ENST00000517080 TRAPPC1Q9Y5R8 145 aa-1.12□□□□□ -2.59
RNU6-1236P-201ENST00000517080 CHCHD2Q9Y6H1 151 aaPredicted RBP-1.12□□□□□ -2.59
RNU6-1236P-201ENST00000517080 KDM5BQ9UGL1 1544 aa-1.12□□□□□ -2.59
RNU6-1236P-201ENST00000517080 PHIPQ8WWQ0 1821 aa-1.12□□□□□ -2.59
RNU6-1236P-201ENST00000517080 WASHC2AQ641Q2 1341 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 PBRM1Q86U86 1689 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 TRBV24-1A0A075B6N3 115 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 SMIM26A0A096LP01 95 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 NSG1A0A0A6YYJ2 146 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 TRAV10A0A0B4J240 114 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 IGHV2OR16-5A0A0B4J2B6 119 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 CCL15-CCL14A0A0B4J2E2 113 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 FAM236DA0A1B0GTK5 79 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 LOC389332A0A1B0GUA5 103 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 A0A1W2PQD3 144 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 OR51F1A6NGY5 319 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 SLC9B1P1A6NJY1 282 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 PDZK1P1A8MUH7 402 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 C2orf74A8MZ97 194 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 E5RGE8 158 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 F8WEM9 126 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 RNASEK-C17orf49H0YIS7 233 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 H3BT86 120 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 J3KTA2 159 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 hCG_2039718K7EN88 272 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 CYB561D2O14569 222 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 AGPAT2O15120 278 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 NPFFO15130 113 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 MAFGO15525 162 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 EEF1E1O43324 174 aaKnown RBP-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 CREB3O43889 395 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 CXCL13O43927 109 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 GMDSO60547 372 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 MED24O75448 989 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 UPK1BO75841 260 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 UTS2O95399 124 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 TCL1BO95988 128 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 CXorf1O96002 111 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 IGHV3-33P01772 117 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 PMP2P02689 132 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 PPBPP02775 128 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 MT-ATP8P03928 68 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 DNTTP04053 509 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 RPN1P04843 607 aaKnown RBP-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 SSBP05455 408 aaKnown RBP eCLIP-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 CT45A8P0DMV1 189 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 CT45A9P0DMV2 189 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 FAM236CP0DP71 79 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 LIPCP11150 499 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 HLA-EP13747 358 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 NPPBP16860 134 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 GABRG2P18507 467 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 POLR2EP19388 210 aaKnown RBP-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 CCNA2P20248 432 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 RAB3BP20337 219 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 EVI2AP22794 236 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 FKBP2P26885 142 aaKnown RBP-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 CALML3P27482 149 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 HTR2CP28335 458 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 TEAD1P28347 426 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 GJB2P29033 226 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 S100A2P29034 98 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 SERPINA4P29622 427 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 CRABP1P29762 137 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 STIP1P31948 543 aaKnown RBP-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 RPL9P32969 192 aaKnown RBP-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 CHI3L1P36222 383 aaPredicted RBP-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 POLR2IP36954 125 aaKnown RBP-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 NNMTP40261 264 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 EIF2DP41214 584 aaKnown RBP-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 CDKN2CP42773 168 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 SSR2P43308 183 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 RPL5P46777 297 aaKnown RBP-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 GABRA2P47869 451 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 PIP4K2AP48426 406 aaPredicted RBP-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 HSPA13P48723 471 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 TUFMP49411 452 aaKnown RBP-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 TUBP50607 506 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 NDUFA8P51970 172 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 PPP5CP53041 499 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 RCAN1P53805 252 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 CDKN2DP55273 166 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 EIF3BP55884 814 aaKnown RBP-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 RPS16P62249 146 aaKnown RBP-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 ACTG2P63267 376 aa-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 MAT1AQ00266 395 aaKnown RBP-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 GABPB1Q06547 395 aaPredicted RBP-1.13□□□□□ -2.59
RNU6-1236P-201ENST00000517080 TRAP1Q12931 704 aaKnown RBP-1.13□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms