RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 MOBPQ13875 183 aa4.33□□□□□ -1.72
NUP54-215ENST00000514313 ACTBL2Q562R1 376 aa4.33□□□□□ -1.72
NUP54-215ENST00000514313 KCTD16Q68DU8 428 aa4.33□□□□□ -1.72
NUP54-215ENST00000514313 CYP4Z1Q86W10 505 aa4.33□□□□□ -1.72
NUP54-215ENST00000514313 STK40Q8N2I9 435 aa4.33□□□□□ -1.72
NUP54-215ENST00000514313 SLC35G3Q8N808 338 aa4.33□□□□□ -1.72
NUP54-215ENST00000514313 ZNF709Q8N972 641 aa4.33□□□□□ -1.72
NUP54-215ENST00000514313 FAM57AQ8TBR7 257 aa4.33□□□□□ -1.72
NUP54-215ENST00000514313 TRNT1Q96Q11 434 aaKnown RBP4.33□□□□□ -1.72
NUP54-215ENST00000514313 ABCB9Q9NP78 766 aa4.33□□□□□ -1.72
NUP54-215ENST00000514313 ZNF835Q9Y2P0 537 aa4.33□□□□□ -1.72
NUP54-215ENST00000514313 FADS3Q9Y5Q0 445 aa4.33□□□□□ -1.72
NUP54-215ENST00000514313 INSIG2Q9Y5U4 225 aa4.33□□□□□ -1.72
NUP54-215ENST00000514313 USH1CQ9Y6N9 552 aa4.33□□□□□ -1.72
NUP54-215ENST00000514313 PLA2R1Q13018 1463 aa4.32□□□□□ -1.72
NUP54-215ENST00000514313 ELP1O95163 1332 aa4.32□□□□□ -1.72
NUP54-215ENST00000514313 OR2A4O95047 310 aa4.32□□□□□ -1.72
NUP54-215ENST00000514313 IGKV5-2P06315 115 aa4.32□□□□□ -1.72
NUP54-215ENST00000514313 M6PRP20645 277 aa4.32□□□□□ -1.72
NUP54-215ENST00000514313 TTPAP49638 278 aa4.32□□□□□ -1.72
NUP54-215ENST00000514313 CD164Q04900 197 aa4.32□□□□□ -1.72
NUP54-215ENST00000514313 PRKCDQ05655 676 aa4.32□□□□□ -1.72
NUP54-215ENST00000514313 ZNF616Q08AN1 781 aa4.32□□□□□ -1.72
NUP54-215ENST00000514313 CEACAM21Q3KPI0 293 aa4.32□□□□□ -1.72
NUP54-215ENST00000514313 ZNF404Q494X3 552 aa4.32□□□□□ -1.72
NUP54-215ENST00000514313 CLEC6AQ6EIG7 209 aa4.32□□□□□ -1.72
NUP54-215ENST00000514313 FAM231DQ6ZW35 169 aa4.32□□□□□ -1.72
NUP54-215ENST00000514313 ITPRIPQ8IWB1 547 aa4.32□□□□□ -1.72
NUP54-215ENST00000514313 OSR2Q8N2R0 312 aa4.32□□□□□ -1.72
NUP54-215ENST00000514313 TMEM105Q8N8V8 129 aa4.32□□□□□ -1.72
NUP54-215ENST00000514313 UBA3Q8TBC4 463 aa4.32□□□□□ -1.72
NUP54-215ENST00000514313 RTN4IP1Q8WWV3 396 aaPredicted RBP4.32□□□□□ -1.72
NUP54-215ENST00000514313 FMC1Q96HJ9 113 aa4.32□□□□□ -1.72
NUP54-215ENST00000514313 OR2A7Q96R45 310 aa4.32□□□□□ -1.72
NUP54-215ENST00000514313 URGCP-MRPS24S4R325 110 aa4.32□□□□□ -1.72
NUP54-215ENST00000514313 S4R3C0 116 aa4.32□□□□□ -1.72
NUP54-215ENST00000514313 SCN1AP35498 2009 aa4.32□□□□□ -1.72
NUP54-215ENST00000514313 SLIT3O75094 1523 aa4.31□□□□□ -1.72
NUP54-215ENST00000514313 TUBGCP6Q96RT7 1819 aa4.31□□□□□ -1.72
NUP54-215ENST00000514313 LOC389332A0A1B0GUA5 103 aa4.31□□□□□ -1.72
NUP54-215ENST00000514313 A0A1B0GXF2 115 aa4.31□□□□□ -1.72
NUP54-215ENST00000514313 TMEM150BA6NC51 233 aa4.31□□□□□ -1.72
NUP54-215ENST00000514313 LRCOL1A6NCL2 159 aa4.31□□□□□ -1.72
NUP54-215ENST00000514313 M0QXV9 152 aa4.31□□□□□ -1.72
NUP54-215ENST00000514313 WISP3O95389 354 aaPredicted RBP4.31□□□□□ -1.72
NUP54-215ENST00000514313 CDK1P06493 297 aa4.31□□□□□ -1.72
NUP54-215ENST00000514313 NTF3P20783 257 aa4.31□□□□□ -1.72
NUP54-215ENST00000514313 GCLMP48507 274 aa4.31□□□□□ -1.72
NUP54-215ENST00000514313 OR10A3P58181 314 aa4.31□□□□□ -1.72
NUP54-215ENST00000514313 FLOT2Q14254 428 aa4.31□□□□□ -1.72
NUP54-215ENST00000514313 SYCP1Q15431 976 aa4.31□□□□□ -1.72
NUP54-215ENST00000514313 SP6Q3SY56 376 aa4.31□□□□□ -1.72
NUP54-215ENST00000514313 CLLU1OSQ5K130 101 aa4.31□□□□□ -1.72
NUP54-215ENST00000514313 MORN3Q6PF18 240 aaPredicted RBP4.31□□□□□ -1.72
NUP54-215ENST00000514313 NELFBQ8WX92 580 aa4.31□□□□□ -1.72
NUP54-215ENST00000514313 CCL17Q92583 94 aa4.31□□□□□ -1.72
NUP54-215ENST00000514313 RORBQ92753 470 aa4.31□□□□□ -1.72
NUP54-215ENST00000514313 WDR34Q96EX3 536 aa4.31□□□□□ -1.72
NUP54-215ENST00000514313 BIRC8Q96P09 236 aa4.31□□□□□ -1.72
NUP54-215ENST00000514313 MS4A8Q9BY19 250 aa4.31□□□□□ -1.72
NUP54-215ENST00000514313 RBM22Q9NW64 420 aaKnown RBP eCLIP4.31□□□□□ -1.72
NUP54-215ENST00000514313 YEATS2Q9ULM3 1422 aa4.3□□□□□ -1.72
NUP54-215ENST00000514313 A0A1B0GX12 115 aa4.3□□□□□ -1.72
NUP54-215ENST00000514313 GOLGA8IPA6NC78 632 aa4.3□□□□□ -1.72
NUP54-215ENST00000514313 MKRN2OSH3BPM6 223 aa4.3□□□□□ -1.72
NUP54-215ENST00000514313 SULT1C2O00338 296 aa4.3□□□□□ -1.72
NUP54-215ENST00000514313 OR7C2O60412 319 aa4.3□□□□□ -1.72
NUP54-215ENST00000514313 SCN2BO60939 215 aa4.3□□□□□ -1.72
NUP54-215ENST00000514313 SEC11BP0C7V7 166 aa4.3□□□□□ -1.72
NUP54-215ENST00000514313 TEAD1P28347 426 aa4.3□□□□□ -1.72
NUP54-215ENST00000514313 RPA3P35244 121 aaPredicted RBP4.3□□□□□ -1.72
NUP54-215ENST00000514313 SLAMF1Q13291 335 aa4.3□□□□□ -1.72
NUP54-215ENST00000514313 BTN1A1Q13410 526 aa4.3□□□□□ -1.72
NUP54-215ENST00000514313 Q499Y3 187 aa4.3□□□□□ -1.72
NUP54-215ENST00000514313 OR10J3Q5JRS4 329 aa4.3□□□□□ -1.72
NUP54-215ENST00000514313 TPGS1Q6ZTW0 290 aa4.3□□□□□ -1.72
NUP54-215ENST00000514313 MRPL52Q86TS9 123 aaKnown RBP4.3□□□□□ -1.72
NUP54-215ENST00000514313 OR52N1Q8NH53 320 aa4.3□□□□□ -1.72
NUP54-215ENST00000514313 YIPF6Q96EC8 236 aa4.3□□□□□ -1.72
NUP54-215ENST00000514313 IP6K3Q96PC2 410 aa4.3□□□□□ -1.72
NUP54-215ENST00000514313 DERL3Q96Q80 235 aa4.3□□□□□ -1.72
NUP54-215ENST00000514313 NDEL1Q9GZM8 345 aa4.3□□□□□ -1.72
NUP54-215ENST00000514313 PARP11Q9NR21 331 aa4.3□□□□□ -1.72
NUP54-215ENST00000514313 RBM12B-AS1Q9P1G2 102 aa4.3□□□□□ -1.72
NUP54-215ENST00000514313 SIGLEC1Q9BZZ2 1709 aa4.29□□□□□ -1.72
NUP54-215ENST00000514313 EIF4G1Q04637 1599 aaKnown RBP4.29□□□□□ -1.72
NUP54-215ENST00000514313 UPK2O00526 184 aa4.29□□□□□ -1.72
NUP54-215ENST00000514313 CETN3O15182 167 aa4.29□□□□□ -1.72
NUP54-215ENST00000514313 LHBP01229 141 aa4.29□□□□□ -1.72
NUP54-215ENST00000514313 ZNF286BP0CG31 522 aa4.29□□□□□ -1.72
NUP54-215ENST00000514313 LGALS7P47929 136 aa4.29□□□□□ -1.72
NUP54-215ENST00000514313 ATP5G2Q06055 141 aa4.29□□□□□ -1.72
NUP54-215ENST00000514313 MEF2CQ06413 473 aaPredicted RBP4.29□□□□□ -1.72
NUP54-215ENST00000514313 BAXQ07812 192 aa4.29□□□□□ -1.72
NUP54-215ENST00000514313 CLEC12AQ5QGZ9 265 aa4.29□□□□□ -1.72
NUP54-215ENST00000514313 ZNF678Q5SXM1 525 aa4.29□□□□□ -1.72
NUP54-215ENST00000514313 ZNF738Q8NE65 137 aa4.29□□□□□ -1.72
NUP54-215ENST00000514313 ZNF717Q9BY31 904 aaPredicted RBP4.29□□□□□ -1.72
NUP54-215ENST00000514313 POMKQ9H5K3 350 aa4.29□□□□□ -1.72
NUP54-215ENST00000514313 METTL8Q9H825 291 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms