RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 TXNL4BQ9NX01 149 aaKnown RBP16.9■□□□□ 0.3
USP53-208ENST00000514305 GHRLQ9UBU3 117 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 GLS2Q9UI32 602 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 PCDHB10Q9UN67 800 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 WIPI2Q9Y4P8 454 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 CACNG2Q9Y698 323 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 LOC100506127A0A0U1RQW1 187 aa16.89■□□□□ 0.29
USP53-208ENST00000514305 OOEPA6NGQ2 149 aa16.89■□□□□ 0.29
USP53-208ENST00000514305 NXPH2O95156 264 aa16.89■□□□□ 0.29
USP53-208ENST00000514305 TFAP2AP05549 437 aa16.89■□□□□ 0.29
USP53-208ENST00000514305 PGA5P0DJD9 388 aa16.89■□□□□ 0.29
USP53-208ENST00000514305 GADD45AP24522 165 aa16.89■□□□□ 0.29
USP53-208ENST00000514305 PTGFRP43088 359 aa16.89■□□□□ 0.29
USP53-208ENST00000514305 ALDH3B2P48448 385 aa16.89■□□□□ 0.29
USP53-208ENST00000514305 SMIM21Q3B7S5 101 aa16.89■□□□□ 0.29
USP53-208ENST00000514305 CALHM1Q8IU99 346 aa16.89■□□□□ 0.29
USP53-208ENST00000514305 GCSAMQ8N6F7 178 aa16.89■□□□□ 0.29
USP53-208ENST00000514305 BOLLQ8N9W6 283 aaKnown RBP16.89■□□□□ 0.29
USP53-208ENST00000514305 TNFAIP8L1Q8WVP5 186 aa16.89■□□□□ 0.29
USP53-208ENST00000514305 FAM192AQ9GZU8 254 aa16.89■□□□□ 0.29
USP53-208ENST00000514305 METTL9Q9H1A3 318 aa16.89■□□□□ 0.29
USP53-208ENST00000514305 OR51E2Q9H255 320 aa16.89■□□□□ 0.29
USP53-208ENST00000514305 SMURF1Q9HCE7 757 aa16.89■□□□□ 0.29
USP53-208ENST00000514305 IGKV1-27A0A075B6S5 117 aa16.88■□□□□ 0.29
USP53-208ENST00000514305 AKR7A2O43488 359 aa16.88■□□□□ 0.29
USP53-208ENST00000514305 NOL3O60936 208 aaKnown RBP16.88■□□□□ 0.29
USP53-208ENST00000514305 PLATP00750 562 aa16.88■□□□□ 0.29
USP53-208ENST00000514305 MTNR1BP49286 362 aa16.88■□□□□ 0.29
USP53-208ENST00000514305 CAPZA1P52907 286 aa16.88■□□□□ 0.29
USP53-208ENST00000514305 FAM27D1Q5T7N8 215 aa16.88■□□□□ 0.29
USP53-208ENST00000514305 ASPHD2Q6ICH7 369 aa16.88■□□□□ 0.29
USP53-208ENST00000514305 LRRC28Q86X40 367 aaPredicted RBP16.88■□□□□ 0.29
USP53-208ENST00000514305 RFT1Q96AA3 541 aa16.88■□□□□ 0.29
USP53-208ENST00000514305 ORAI1Q96D31 301 aa16.88■□□□□ 0.29
USP53-208ENST00000514305 RAB39BQ96DA2 213 aa16.88■□□□□ 0.29
USP53-208ENST00000514305 SPACA5Q96QH8 159 aa16.88■□□□□ 0.29
USP53-208ENST00000514305 GAL3ST1Q99999 423 aa16.88■□□□□ 0.29
USP53-208ENST00000514305 ELL3Q9HB65 397 aaPredicted RBP16.88■□□□□ 0.29
USP53-208ENST00000514305 SVEP1Q4LDE5 3571 aa16.88■□□□□ 0.29
USP53-208ENST00000514305 SYNGR1O43759 233 aa16.87■□□□□ 0.29
USP53-208ENST00000514305 RHBDL1O75783 438 aa16.87■□□□□ 0.29
USP53-208ENST00000514305 CSTBP04080 98 aaKnown RBP16.87■□□□□ 0.29
USP53-208ENST00000514305 UBBP0CG47 229 aa16.87■□□□□ 0.29
USP53-208ENST00000514305 RAB3BP20337 219 aa16.87■□□□□ 0.29
USP53-208ENST00000514305 RSU1Q15404 277 aa16.87■□□□□ 0.29
USP53-208ENST00000514305 CR1LQ2VPA4 569 aa16.87■□□□□ 0.29
USP53-208ENST00000514305 TEX36Q5VZQ5 186 aa16.87■□□□□ 0.29
USP53-208ENST00000514305 LRRTM1Q86UE6 522 aa16.87■□□□□ 0.29
USP53-208ENST00000514305 LINC01356Q8N9X3 169 aa16.87■□□□□ 0.29
USP53-208ENST00000514305 FUNDC2Q9BWH2 189 aa16.87■□□□□ 0.29
USP53-208ENST00000514305 PLGRKTQ9HBL7 147 aa16.87■□□□□ 0.29
USP53-208ENST00000514305 MIOXQ9UGB7 285 aa16.87■□□□□ 0.29
USP53-208ENST00000514305 ING4Q9UNL4 249 aa16.87■□□□□ 0.29
USP53-208ENST00000514305 V9GY05 133 aa16.87■□□□□ 0.29
USP53-208ENST00000514305 DYSFO75923 2080 aa16.86■□□□□ 0.29
USP53-208ENST00000514305 IGHV2-70P01814 119 aa16.86■□□□□ 0.29
USP53-208ENST00000514305 KRTAP24-1Q3LI83 254 aa16.86■□□□□ 0.29
USP53-208ENST00000514305 AVPI1Q5T686 147 aa16.86■□□□□ 0.29
USP53-208ENST00000514305 DCDC5Q6ZRR9 648 aa16.86■□□□□ 0.29
USP53-208ENST00000514305 NLRC3Q7RTR2 1065 aa16.86■□□□□ 0.29
USP53-208ENST00000514305 ANKRD13BQ86YJ7 626 aa16.86■□□□□ 0.29
USP53-208ENST00000514305 OR5D18Q8NGL1 313 aa16.86■□□□□ 0.29
USP53-208ENST00000514305 OR6M1Q8NGM8 313 aa16.86■□□□□ 0.29
USP53-208ENST00000514305 SLAMF9Q96A28 289 aa16.86■□□□□ 0.29
USP53-208ENST00000514305 NRIP2Q9BQI9 281 aa16.86■□□□□ 0.29
USP53-208ENST00000514305 DNTTIP1Q9H147 329 aa16.86■□□□□ 0.29
USP53-208ENST00000514305 NLKQ9UBE8 527 aa16.86■□□□□ 0.29
USP53-208ENST00000514305 SPRY1O43609 319 aaPredicted RBP16.85■□□□□ 0.29
USP53-208ENST00000514305 TMEM127O75204 238 aa16.85■□□□□ 0.29
USP53-208ENST00000514305 KDM4BO94953 1096 aa16.85■□□□□ 0.29
USP53-208ENST00000514305 IL2RGP31785 369 aa16.85■□□□□ 0.29
USP53-208ENST00000514305 ZP1P60852 638 aa16.85■□□□□ 0.29
USP53-208ENST00000514305 ZNF404Q494X3 552 aa16.85■□□□□ 0.29
USP53-208ENST00000514305 C4orf48Q5BLP8 95 aa16.85■□□□□ 0.29
USP53-208ENST00000514305 AWAT2Q6E213 333 aa16.85■□□□□ 0.29
USP53-208ENST00000514305 SFRP4Q6FHJ7 346 aaPredicted RBP16.85■□□□□ 0.29
USP53-208ENST00000514305 ACP7Q6ZNF0 438 aa16.85■□□□□ 0.29
USP53-208ENST00000514305 SLC36A1Q7Z2H8 476 aa16.85■□□□□ 0.29
USP53-208ENST00000514305 CROCCP3Q8IVE0 287 aa16.85■□□□□ 0.29
USP53-208ENST00000514305 FAM58AQ8N1B3 248 aa16.85■□□□□ 0.29
USP53-208ENST00000514305 EMG1Q92979 244 aaKnown RBP16.85■□□□□ 0.29
USP53-208ENST00000514305 PPIL3Q9H2H8 161 aaKnown RBP16.85■□□□□ 0.29
USP53-208ENST00000514305 CNTD2Q9H8S5 307 aa16.85■□□□□ 0.29
USP53-208ENST00000514305 TMEM165Q9HC07 324 aa16.85■□□□□ 0.29
USP53-208ENST00000514305 IL36GQ9NZH8 169 aa16.85■□□□□ 0.29
USP53-208ENST00000514305 MTCH1Q9NZJ7 389 aa16.85■□□□□ 0.29
USP53-208ENST00000514305 MRPS28Q9Y2Q9 187 aaKnown RBP16.85■□□□□ 0.29
USP53-208ENST00000514305 AK6Q9Y3D8 172 aaKnown RBP16.85■□□□□ 0.29
USP53-208ENST00000514305 NKX6-3A6NJ46 265 aa16.84■□□□□ 0.29
USP53-208ENST00000514305 H3BUI4 141 aa16.84■□□□□ 0.29
USP53-208ENST00000514305 KNG1P01042 644 aa16.84■□□□□ 0.29
USP53-208ENST00000514305 HTR2CP28335 458 aa16.84■□□□□ 0.29
USP53-208ENST00000514305 CD80P33681 288 aa16.84■□□□□ 0.29
USP53-208ENST00000514305 ZMYND11Q15326 602 aa16.84■□□□□ 0.29
USP53-208ENST00000514305 C1orf100Q5SVJ3 147 aa16.84■□□□□ 0.29
USP53-208ENST00000514305 GPR107Q5VW38 600 aa16.84■□□□□ 0.29
USP53-208ENST00000514305 ASCL4Q6XD76 172 aa16.84■□□□□ 0.29
USP53-208ENST00000514305 DEFB108BQ8NET1 73 aa16.84■□□□□ 0.29
USP53-208ENST00000514305 TBC1D15Q8TC07 691 aa16.84■□□□□ 0.29
USP53-208ENST00000514305 MRPS24Q96EL2 167 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms