RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 SMN1Q16637 294 aaKnown RBP11.18□□□□□ -0.62
SPCS3-204ENST00000513139 TEX30Q5JUR7 227 aa11.18□□□□□ -0.62
SPCS3-204ENST00000513139 SLC25A30Q5SVS4 291 aa11.18□□□□□ -0.62
SPCS3-204ENST00000513139 Q6ZS46 218 aa11.18□□□□□ -0.62
SPCS3-204ENST00000513139 TMEM219Q86XT9 240 aa11.18□□□□□ -0.62
SPCS3-204ENST00000513139 GID4Q8IVV7 300 aa11.18□□□□□ -0.62
SPCS3-204ENST00000513139 TMEM185AQ8NFB2 350 aa11.18□□□□□ -0.62
SPCS3-204ENST00000513139 OR52H1Q8NGJ2 320 aa11.18□□□□□ -0.62
SPCS3-204ENST00000513139 OR6N2Q8NGY6 317 aa11.18□□□□□ -0.62
SPCS3-204ENST00000513139 APH1BQ8WW43 257 aa11.18□□□□□ -0.62
SPCS3-204ENST00000513139 RPL3LQ92901 407 aaKnown RBP11.18□□□□□ -0.62
SPCS3-204ENST00000513139 SLAMF6Q96DU3 332 aa11.18□□□□□ -0.62
SPCS3-204ENST00000513139 AMELYQ99218 206 aa11.18□□□□□ -0.62
SPCS3-204ENST00000513139 APOL4Q9BPW4 351 aa11.18□□□□□ -0.62
SPCS3-204ENST00000513139 VCX3BQ9H321 246 aa11.18□□□□□ -0.62
SPCS3-204ENST00000513139 PPP1R3EQ9H7J1 279 aa11.18□□□□□ -0.62
SPCS3-204ENST00000513139 AMBNQ9NP70 447 aa11.18□□□□□ -0.62
SPCS3-204ENST00000513139 ZNF222Q9UK12 451 aa11.18□□□□□ -0.62
SPCS3-204ENST00000513139 KLHDC2Q9Y2U9 406 aa11.18□□□□□ -0.62
SPCS3-204ENST00000513139 RHBDD3Q9Y3P4 386 aa11.18□□□□□ -0.62
SPCS3-204ENST00000513139 TBL2Q9Y4P3 447 aaKnown RBP11.18□□□□□ -0.62
SPCS3-204ENST00000513139 N6AMT1Q9Y5N5 214 aa11.18□□□□□ -0.62
SPCS3-204ENST00000513139 TCRBV4S1A1TA0A5B7 111 aa11.17□□□□□ -0.62
SPCS3-204ENST00000513139 TBX1O43435 398 aa11.17□□□□□ -0.62
SPCS3-204ENST00000513139 WBP4O75554 376 aaKnown RBP11.17□□□□□ -0.62
SPCS3-204ENST00000513139 RHBDL1O75783 438 aa11.17□□□□□ -0.62
SPCS3-204ENST00000513139 APOC1P02654 83 aa11.17□□□□□ -0.62
SPCS3-204ENST00000513139 PSG2P11465 335 aa11.17□□□□□ -0.62
SPCS3-204ENST00000513139 HTR1FP30939 366 aa11.17□□□□□ -0.62
SPCS3-204ENST00000513139 DCTDP32321 178 aa11.17□□□□□ -0.62
SPCS3-204ENST00000513139 ERVFRD-1P60508 538 aa11.17□□□□□ -0.62
SPCS3-204ENST00000513139 ISL1P61371 349 aa11.17□□□□□ -0.62
SPCS3-204ENST00000513139 RPL31P62899 125 aaKnown RBP11.17□□□□□ -0.62
SPCS3-204ENST00000513139 GRB2P62993 217 aaKnown RBP11.17□□□□□ -0.62
SPCS3-204ENST00000513139 TCTEX1D4Q5JR98 221 aa11.17□□□□□ -0.62
SPCS3-204ENST00000513139 SHFQ7M4L6 423 aa11.17□□□□□ -0.62
SPCS3-204ENST00000513139 RNF144BQ7Z419 303 aa11.17□□□□□ -0.62
SPCS3-204ENST00000513139 LHFPL4Q7Z7J7 247 aa11.17□□□□□ -0.62
SPCS3-204ENST00000513139 DYNAPQ8N1N2 210 aa11.17□□□□□ -0.62
SPCS3-204ENST00000513139 CNIH3Q8TBE1 160 aa11.17□□□□□ -0.62
SPCS3-204ENST00000513139 OR5P3Q8WZ94 311 aa11.17□□□□□ -0.62
SPCS3-204ENST00000513139 SDSLQ96GA7 329 aa11.17□□□□□ -0.62
SPCS3-204ENST00000513139 C19orf12Q9NSK7 152 aa11.17□□□□□ -0.62
SPCS3-204ENST00000513139 CENPMQ9NSP4 180 aa11.17□□□□□ -0.62
SPCS3-204ENST00000513139 CLN6Q9NWW5 311 aa11.17□□□□□ -0.62
SPCS3-204ENST00000513139 ZMAT5Q9UDW3 170 aaKnown RBP11.17□□□□□ -0.62
SPCS3-204ENST00000513139 MPZL2O60487 215 aa11.16□□□□□ -0.62
SPCS3-204ENST00000513139 ZFPL1O95159 310 aa11.16□□□□□ -0.62
SPCS3-204ENST00000513139 GLRA1P23415 457 aa11.16□□□□□ -0.62
SPCS3-204ENST00000513139 EIF2B1Q14232 305 aaKnown RBP11.16□□□□□ -0.62
SPCS3-204ENST00000513139 TMEM95Q3KNT9 176 aa11.16□□□□□ -0.62
SPCS3-204ENST00000513139 LCN1P1Q5VSP4 162 aa11.16□□□□□ -0.62
SPCS3-204ENST00000513139 MEDAGQ5VYS4 303 aa11.16□□□□□ -0.62
SPCS3-204ENST00000513139 TMEM200BQ69YZ2 307 aa11.16□□□□□ -0.62
SPCS3-204ENST00000513139 PRSS45Q7RTY3 260 aa11.16□□□□□ -0.62
SPCS3-204ENST00000513139 CENPVQ7Z7K6 275 aaPredicted RBP11.16□□□□□ -0.62
SPCS3-204ENST00000513139 CALHM1Q8IU99 346 aa11.16□□□□□ -0.62
SPCS3-204ENST00000513139 LINC00482Q8N8I6 264 aa11.16□□□□□ -0.62
SPCS3-204ENST00000513139 THEM6Q8WUY1 208 aa11.16□□□□□ -0.62
SPCS3-204ENST00000513139 RFKQ969G6 155 aa11.16□□□□□ -0.62
SPCS3-204ENST00000513139 ABHD6Q9BV23 337 aa11.16□□□□□ -0.62
SPCS3-204ENST00000513139 RGCCQ9H4X1 137 aa11.16□□□□□ -0.62
SPCS3-204ENST00000513139 ADGRL4Q9HBW9 690 aa11.16□□□□□ -0.62
SPCS3-204ENST00000513139 WARS2Q9UGM6 360 aaKnown RBP11.16□□□□□ -0.62
SPCS3-204ENST00000513139 H3BUI4 141 aa11.15□□□□□ -0.62
SPCS3-204ENST00000513139 LCE2BO14633 110 aa11.15□□□□□ -0.62
SPCS3-204ENST00000513139 CST4P01036 141 aa11.15□□□□□ -0.62
SPCS3-204ENST00000513139 ANXA2P07355 339 aaKnown RBP11.15□□□□□ -0.62
SPCS3-204ENST00000513139 COX7A1P24310 79 aa11.15□□□□□ -0.62
SPCS3-204ENST00000513139 AZGP1P25311 298 aaKnown RBP11.15□□□□□ -0.62
SPCS3-204ENST00000513139 LMO1P25800 156 aa11.15□□□□□ -0.62
SPCS3-204ENST00000513139 CX3CR1P49238 355 aa11.15□□□□□ -0.62
SPCS3-204ENST00000513139 PRDX4Q13162 271 aa11.15□□□□□ -0.62
SPCS3-204ENST00000513139 IL18R1Q13478 541 aa11.15□□□□□ -0.62
SPCS3-204ENST00000513139 SSX2Q16385 188 aa11.15□□□□□ -0.62
SPCS3-204ENST00000513139 PLA1AQ53H76 456 aa11.15□□□□□ -0.62
SPCS3-204ENST00000513139 LAIR2Q6ISS4 152 aa11.15□□□□□ -0.62
SPCS3-204ENST00000513139 C8orf59Q8N0T1 100 aaPredicted RBP11.15□□□□□ -0.62
SPCS3-204ENST00000513139 OTOSQ8NHW6 89 aa11.15□□□□□ -0.62
SPCS3-204ENST00000513139 MYDGFQ969H8 173 aa11.15□□□□□ -0.62
SPCS3-204ENST00000513139 RNFT2Q96EX2 444 aa11.15□□□□□ -0.62
SPCS3-204ENST00000513139 RNF170Q96K19 258 aa11.15□□□□□ -0.62
SPCS3-204ENST00000513139 Q96MT0 163 aa11.15□□□□□ -0.62
SPCS3-204ENST00000513139 CNN2Q99439 309 aaKnown RBP11.15□□□□□ -0.62
SPCS3-204ENST00000513139 MCRIP2Q9BUT9 160 aaKnown RBP11.15□□□□□ -0.62
SPCS3-204ENST00000513139 TTTY10Q9BZA0 68 aa11.15□□□□□ -0.62
SPCS3-204ENST00000513139 YIPF3Q9GZM5 350 aa11.15□□□□□ -0.62
SPCS3-204ENST00000513139 COPS3Q9UNS2 423 aa11.15□□□□□ -0.62
SPCS3-204ENST00000513139 DNAH7Q8WXX0 4024 aa11.15□□□□□ -0.62
SPCS3-204ENST00000513139 ZNF850A8MQ14 1090 aa11.14□□□□□ -0.63
SPCS3-204ENST00000513139 ODF3BA8MYP8 253 aa11.14□□□□□ -0.63
SPCS3-204ENST00000513139 PRR32B1ATL7 298 aa11.14□□□□□ -0.63
SPCS3-204ENST00000513139 PSMD9O00233 223 aa11.14□□□□□ -0.63
SPCS3-204ENST00000513139 MAGEB4O15481 346 aaPredicted RBP11.14□□□□□ -0.63
SPCS3-204ENST00000513139 ALOX5APP20292 161 aa11.14□□□□□ -0.63
SPCS3-204ENST00000513139 HSD11B1P28845 292 aa11.14□□□□□ -0.63
SPCS3-204ENST00000513139 ATP6V1E1P36543 226 aa11.14□□□□□ -0.63
SPCS3-204ENST00000513139 CAPZA1P52907 286 aa11.14□□□□□ -0.63
SPCS3-204ENST00000513139 ZNF91Q05481 1191 aa11.14□□□□□ -0.63
SPCS3-204ENST00000513139 DOC2BQ14184 412 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms