RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 TIFABQ6ZNK6 161 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 CCL4L1Q8NHW4 92 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 NPFFR1Q9GZQ6 430 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 GPR35Q9HC97 309 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 GDF2Q9UK05 429 aaPredicted RBP7.95□□□□□ -1.14
VCAN-208ENST00000512590 CDC42EP3Q9UKI2 254 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 E5RGE8 158 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 AKR7A2O43488 359 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 PAPLNO95428 1278 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 GHRHP01286 108 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 PDGFAP04085 211 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 TFAP2AP05549 437 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 LY6DQ14210 128 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 C16orf47Q6ZP98 133 aaPredicted RBP7.95□□□□□ -1.14
VCAN-208ENST00000512590 KLHDC8BQ8IXV7 354 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 OR1L6Q8NGR2 347 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 GABARAPL3Q9BY60 117 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 LIPFP07098 398 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 TEAD1P28347 426 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 SRD5A2P31213 254 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 PIGPP57054 158 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 NXPH1P58417 271 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 HLXQ14774 488 aaPredicted RBP7.95□□□□□ -1.14
VCAN-208ENST00000512590 ZNF789Q5FWF6 425 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 SAMD13Q5VXD3 122 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 GPX8Q8TED1 209 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 SLC25A28Q96A46 364 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 Q96M85 177 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 ZMAT4Q9H898 229 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 PRDM7Q9NQW5 492 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 DIMT1Q9UNQ2 313 aaKnown RBP7.95□□□□□ -1.14
VCAN-208ENST00000512590 LEUTXA8MZ59 168 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 TMEM229AB2RXF0 380 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 PATE3B3GLJ2 98 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 F8WEM9 126 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 PMCHP20382 165 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 GALNSP34059 522 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 CLDN18P56856 261 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 PABPC1L2AQ5JQF8 200 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 OR51S1Q8NGJ8 323 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 C11orf68Q9H3H3 251 aaKnown RBP7.95□□□□□ -1.14
VCAN-208ENST00000512590 C7orf69Q9H7B7 122 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 TAF9BQ9HBM6 251 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 A4GNTQ9UNA3 340 aa7.95□□□□□ -1.14
VCAN-208ENST00000512590 COL2A1P02458 1487 aaPredicted RBP7.95□□□□□ -1.14
VCAN-208ENST00000512590 PROB1E7EW31 1015 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 M6PRP20645 277 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 PPOXP50336 477 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 UBE2L3P68036 154 aaKnown RBP7.94□□□□□ -1.14
VCAN-208ENST00000512590 ETFDHQ16134 617 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 TMEM196Q5HYL7 178 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 FBXL16Q8N461 479 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 RTN4IP1Q8WWV3 396 aaPredicted RBP7.94□□□□□ -1.14
VCAN-208ENST00000512590 FAAP24Q9BTP7 215 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 AKIP1Q9NQ31 210 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 CRIM1Q9NZV1 1036 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 ZDHHC8Q9ULC8 765 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 YBX2Q9Y2T7 364 aaKnown RBP7.94□□□□□ -1.14
VCAN-208ENST00000512590 PXDNQ92626 1479 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 IGKV6D-41A0A0C4DH26 115 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 SNRPBP14678 240 aaKnown RBP7.94□□□□□ -1.14
VCAN-208ENST00000512590 EMC4Q5J8M3 183 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 SLCO4C1Q6ZQN7 724 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 ZNF429Q86V71 674 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 C11orf44Q8N8P7 122 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 LGALS14Q8TCE9 139 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 PTP4A1Q93096 173 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 EEF1AKMT3Q96AZ1 226 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 IGHV1OR15-9A0A0B4J2B8 117 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 ADAM10O14672 748 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 SP9P0CG40 484 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 PLAG1Q6DJT9 500 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 FBXL2Q9UKC9 423 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 SHISA8B8ZZ34 492 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 PLPP1O14494 284 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 FAM189A1O60320 539 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 CDKN2AP42771 156 aaKnown RBP7.94□□□□□ -1.14
VCAN-208ENST00000512590 SRSF7Q16629 238 aaKnown RBP eCLIP7.94□□□□□ -1.14
VCAN-208ENST00000512590 FAM74A4Q5TZK3 123 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 ZNF691Q5VV52 312 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 REPIN1Q9BWE0 567 aaKnown RBP7.94□□□□□ -1.14
VCAN-208ENST00000512590 PRR14Q9BWN1 585 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 OPN3Q9H1Y3 402 aaPredicted RBP7.94□□□□□ -1.14
VCAN-208ENST00000512590 CXorf65A6NEN9 183 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 IFITM10A6NMD0 228 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 OR2A4O95047 310 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 PTBP3O95758 552 aaKnown RBP7.94□□□□□ -1.14
VCAN-208ENST00000512590 CSN3P07498 182 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 RPS25P62851 125 aaKnown RBP7.94□□□□□ -1.14
VCAN-208ENST00000512590 CFHR1Q03591 330 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 INPP5JQ15735 1006 aaPredicted RBP7.94□□□□□ -1.14
VCAN-208ENST00000512590 METRNLQ641Q3 311 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 PFN4Q8NHR9 129 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 TM4SF18Q96CE8 201 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 L3HYPDHQ96EM0 354 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 OR2A7Q96R45 310 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 KIDINS220Q9ULH0 1771 aa7.94□□□□□ -1.14
VCAN-208ENST00000512590 CCKARP32238 428 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 CCL8P80075 99 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 PRSS53Q2L4Q9 553 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms